Salmo salar (Atlantic salmon): 106607746
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Entry
106607746 CDS
T04363
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106607746
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106607746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
106607746
NCBI-ProteinID:
XP_014060509
UniProt:
A0A1S3S849
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Position
ssa06:complement(55185422..55199737)
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AA seq
614 aa
AA seq
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MDQQHGKVERFLKLGYSHSDIVRVLESLRHDAQTNDILEELIKTCQTPTTTTTTPSIPAS
RSAYSSPQLIPRGCSSPQPSQPLRPSSATDRDPTGGFRPVVIDGSNVAMSHGNKQVFSCR
GLLLAVRWFLERGLRDITVFVPLWRKEQPSPEAPMTDQHILHELEKRTILVYTPSRCVNG
KRVVCYDDRYIVKLAYESDGIVVSNDNYRDLQIEKPEWKTFIEERLLMYSFANDKFMPPD
DPLGRNGPTIDNFLMKKQWTPENKQQHCPYGKKCTYGVKCKFYHPERSNQSQLSVADELR
AKSKPTAQTDRERSFLPSGPSPALIQEVSQEAHVYTSPYELDLTTTHQYRYLSTPPPLIK
EEHSHSHRASLSDQFTRQRKTGSPALHHRSSLRLCPSPDTDEAFSSLEASLSRVYVQDQT
NNTKGPVVSYTYSSGVANCSQRSGDFYPSSTSSSHSHASNQQRLSLGGPSSAWDAPQKLP
QCACDNSQSFECSPCMYRHQHLQPQLGECSYAVHSNHIHFTEQQYLQSPPPQRQSHSLPE
HSPGQGLSGERAGMTRSNGGKAPESEQRRSVKNQLSTLFPHSMVDYVMSVYPHTLNMSEL
VPLIQRFRISHIPF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcatggaaaagtggagcgcttcctcaagctgggctattcccacagtgac
attgtgcgcgtgttggagagcctgcgccatgacgcccagaccaacgacatactggaggag
ctgatcaagacctgccagacccccactaccaccaccaccaccccatccataccagccagc
cgctcagcctactccagcccacagctgatcccccgaggctgcagctctccccagcccagc
cagcccctgcggcccagctcagctacagacagggatcccactgggggattcagaccagtg
gtcattgatgggagcaatgtggccatgagccatggcaacaagcaagtgttttcatgccgg
gggctgctgctggcagtcaggtggtttctggagaggggtcttcgtgacatcactgtgttc
gtgcccctgtggaggaaggagcagcccagtcccgaggcccccatgacagatcagcacatc
ctccatgagctggagaagaggacgatcctggtgtacaccccgtcacgctgcgtcaacggg
aagagagtggtgtgttacgacgaccgctacatcgtcaaactggcctacgagtccgatggc
atcgttgtgtccaatgacaactacagagacctgcagatagagaagccagagtggaagacg
ttcatagaggaaaggctgttgatgtacagctttgccaatgacaagttcatgcctccagat
gatcctctgggaaggaacggcccaacgattgacaactttctgatgaaaaagcagtggacc
ccagaaaacaagcagcagcattgcccgtatggaaagaagtgtacttacggagtgaagtgc
aagttctaccacccagagcgctccaaccaatcacagctgtctgtggcagatgagctgaga
gccaagagcaaacctactgctcaaacagacagggagcggtcatttctcccctcaggcccc
agccctgctctgatccaggaagtcagccaggaggcccacgtttacacgtccccttatgag
ctggatctaactactactcatcaatacagatatctatccacaccgcctccccttataaaa
gaagagcattcccattcccacagggcttcgcttagcgatcagttcaccaggcagagaaaa
acaggcagcccagctctacaccacagatccagcctccgcctctgccccagcccagacact
gacgaggccttcagctccctggaagcctccctgtccagagtctatgtccaggaccagacc
aacaacactaaggggccagtggtgtcctacacctacagcagtggggtggccaactgcagc
cagcgtagtggggacttctacccttccagcacttccagcagccacagccacgccagcaac
caacagaggctcagcctgggtggaccctcctcggcctgggatgccccccaaaaactgcca
cagtgtgcctgtgacaactcacaaagctttgagtgcagcccgtgcatgtacagacaccaa
catctccagccacagctaggagagtgctcctatgctgttcacagtaaccatatccatttc
acagagcagcagtacctccagagtcctcccccacaaaggcagagtcacagcctcccagaa
cacagcccgggacagggcctctctggcgagagggcggggatgaccaggtccaatggaggt
aaagctccagagagtgaacagaggaggagtgtgaagaaccagctcagcaccctcttcccc
cacagcatggtagactatgtgatgagtgtgtacccacacaccctcaatatgtcagagctg
gtgcctctgattcagaggttccgaatcagccacattcctttctaa
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