Salmo salar (Atlantic salmon): 106607749
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Entry
106607749 CDS
T04363
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106607749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106607749
03036 Chromosome and associated proteins [BR:
sasa03036
]
106607749
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106607749
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106607749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
WD_LRWD1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
106607749
NCBI-ProteinID:
XP_014060516
UniProt:
A0A1S3S842
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All DBs
Position
ssa06:complement(55252333..55258999)
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AA seq
372 aa
AA seq
DB search
MEGINAKYVSKKISKTRWRPVSSSSLQQPDIFATGSWDNEDNSISIWSIGENGVSSMDDE
FEGDPQLVCEYKHNGDVLDLQFLDQDRIVTASSTGAVTIFQHHHNSQTLSVSQLWERAHH
YPCDNAPCTGVVCNSPEIVTVGEDGRIMLFRADQEGVQRTIEKADSSAIHAVTFLRTTEI
LTVNSIGQLKIWDFRQPGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGTLCIWD
VRQGNIPFSLMEAHSSEMWEVHFHPSNPDHLFSCSEDGSLLHWETSSNSDIPSFLQGGRN
TSIISRNAIAPAGGNQSLINAWLTGDSSKGHLETTHMLPTQMLSVNSLDVLGQCLVCGTD
GEAIYVNRHVPI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatcaatgctaagtacgtgtcaaagaaaatcagcaaaacgagatggagaccg
gtctcatcttcgtctttacagcaaccagacatatttgctactgggtcttgggacaacgag
gacaacagcatttccatttggtccatcggagagaatggcgtctccagtatggacgatgaa
tttgagggagaccctcaattagtatgtgaatacaaacataatggggatgttctggacctt
caatttctggatcaagacagaatagtaacagcgtcatcaactggagcggtgactatcttt
cagcatcaccacaacagccagacattgtctgtttctcaactgtgggaaagagcacatcat
tatccctgcgacaacgccccatgtactggagttgtgtgtaacagccctgagattgtcacg
gttggggaagatggaaggatcatgctcttcagagcggaccaggaaggagtgcagcgcacc
atagaaaaggctgacagtagcgcaatccatgctgtgactttcctgaggactacagagatc
cttaccgtcaattctattggccagctcaaaatatgggacttcaggcaaccaggcaatgaa
ccatcgcagattctttcactaactggagacagagtcccgctgcattgtgtggacaggcac
cccaaccaacaacacattgtggccacaggggggcaggatggcacgctctgtatctgggat
gtgagacaaggcaacatacccttttcacttatggaggcacactcttctgaaatgtgggag
gtccattttcatccatccaacccagaccacctgttctcatgctcagaggatggatcactg
ttgcattgggagacttcttcaaattcagacataccatccttcttacaaggtggacggaac
acaagcatcatttctcgcaacgcaatagccccagcaggtgggaaccagtccctcatcaat
gcctggctcactggggactctagtaagggacaccttgagaccactcacatgctgcccacc
caaatgctgtctgtgaacagtctggatgtactgggacaatgcttggtgtgtggaacggac
ggagaggctatttatgtcaacagacatgtcccaatttaa
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integrated database retrieval system
