Salmo salar (Atlantic salmon): 106607845
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Entry
106607845 CDS
T04363
Symbol
gtf3c2
Name
(RefSeq) general transcription factor IIIC subunit 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106607845 (gtf3c2)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
106607845 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_IFT140_1st
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_WDR3_2nd
Beta-prop_VPS8
HC2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
106607845
NCBI-ProteinID:
XP_014060735
UniProt:
A0A1S3S8Q6
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All DBs
Position
ssa06:60206360..60227849
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AA seq
1051 aa
AA seq
DB search
MPVTESCTVRLLRLPLTKKSCSVNLSRLSVIKKRCSVRLSRLLVTDNRCSVRLCRLPVTK
RCSVKLFTLPVTQKRCSVRLCRLLMATVAQKLGKQGSESMGLPHGEETEEQTDPHEKLQA
EAQTNPHEKPQDTNGEAVGATSEQGQDLPPEELPVTSFTPGNRLQRKRVPNPKYQREPDT
TNLQCPDSTKKPRKKMGLKKSIVSNTETDQREPDKKSPKPKPPKKTPTKKTPQKKPVVSS
IDSDRGLIKQTPAKKTSAKKIQKETPQVNSMPAPAVPELRETPEEPETTPSGRPKRRAAK
AALQYLHTLAKEVYNQPDNGTKNDWESSPVPSPSPSSTQPQKQTRGKGKKRKTPDFDSDN
AAEDVDFVPENQDTEEESEDEDTQEDLDLEKTHTPLKDLRSRRISRGLSSQVRYHGNSPN
GLSNNMMGPIWMCTKTTKTFRDEHCNEWVFAEWMPSEKDWHCLSDSEAEKYLPQEMMSTA
FTFSREGIREETPLHRMKRFECLPPHPERWDMLFYTGGPVWAMDWCPSPDGAPASQYAAI
YCHRNLDDQHRMNELYTKPGLIQIWDLGQLQYNTSPQSSPRLAYGIAQDKGFVWNLKWCP
GGAWELPTTNRKAPHMPRLGLLAASTSDGHITIYSLPHPDTLMARRKHTAKGGASPTLMI
CQVQGVITLKRGSFKTNHDEKNNQVLSMDWLPVKPHNILAAGFYDGTVALWNLSSKSILQ
RVRAPDRSFTLYPYHCFIAHDNATRALSFCHASRDLMVTAGDDRLVKMWDLRRTWEPCQS
FKRFLSTEAAWPLHWAGVFISQESTYATFGQHGLNYFDSGYLGFKPLFLVPRKGTMWSLS
ISDWLNTAVTADSVGDVIMVLIPNLFNNPCYLKRSIDRRFPVFRTEMVQLKEEVEENEGG
VGRAEGGVGEEGSGSTSNGTSHHTPQTYRETAKKYYLHYHDMDMRTFKNVQSRAPWKHMQ
VAEAKGGLCLDLMPLASLTKVRFNPNLCAQSWVLSGGQAGLVRAHCLRAMNSSHINKMVQ
ESQAQFSTVFPQDTTDSQGDASAVRHTTEKL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgacagagagttgcacagttaggctgttgaggctgcctctcaccaagaagagt
tgctcagtaaacttgtctaggctttctgtgataaagaagaggtgctcagtacggctgtca
aggcttcttgtgacagataataggtgctccgtaaggttgtgtaggctacctgtgacaaag
aggtgctcagtaaagttatttactctgcctgtgacgcaaaagcgttgctctgtaaggttg
tgtaggttgttgatggcaaccgttgcccagaagttgggcaaacagggtagcgaatccatg
ggtttacctcatggagaggagacagaggaacagactgatccacacgaaaagcttcaggca
gaggcgcagaccaatccacatgaaaaaccacaggacaccaatggggaggctgtcggtgct
acatctgaacaaggccaggatctgcctccagaagagcttcctgtaacatccttcaccccg
ggaaatcgtctgcagagaaaaagagtccctaatccgaaatatcagagagaaccagacacg
accaacctacaatgtcctgactcaacaaaaaagccaaggaaaaagatgggcctgaaaaaa
tccatagtctctaacacagaaactgaccagcgggagcctgacaaaaagagcccaaaaccg
aaaccccccaaaaagacacctaccaaaaagacaccacagaaaaagccagtggtctcgagc
atagacagtgacagggggcttatcaaacagacccctgccaagaagacctctgccaagaag
atacaaaaggaaacaccacaggtcaactccatgcccgcccctgcagtcccggaactgagg
gagaccccagaggagcctgaaaccacccctagtggcagacccaagcggagggcagcaaaa
gctgcattgcagtacctccataccctggccaaggaggtatacaaccaacctgacaatggt
actaagaacgactgggagtctagcccagtccccagccccagccccagctcaacccagccc
cagaaacagaccagaggcaagggtaagaagaggaagacccctgattttgacagtgacaac
gctgcagaggatgtggactttgttccagaaaatcaagacaccgaggaggaaagtgaggat
gaagatactcaagaagacttagacttggagaagacgcacacaccactgaaagaccttaga
tccagacgcatttccagaggtctttcaagtcaagttcgataccatggtaattcccccaat
ggactgtccaacaacatgatgggacccatctggatgtgcaccaaaaccaccaagaccttc
cgtgatgaacactgtaacgaatgggtctttgctgagtggatgccttcagagaaggattgg
cattgcttgtcggacagtgaggctgagaagtatctaccgcaggagatgatgtcaacagcc
ttcaccttctccagagagggcatcagggaggagactcctctgcacagaatgaagaggttt
gagtgcctgccaccccaccctgagcgctgggacatgctattctatacgggcggcccggtg
tgggccatggactggtgcccctcccccgatggcgcccctgccagccagtatgctgccatc
tactgccacaggaacctggatgaccagcacaggatgaacgagttgtacaccaaacctgga
ctcatccagatttgggacctgggacaactccagtacaacaccagtccccagtcctctcca
cggctggcttatggtattgcccaggataaaggctttgtgtggaacctgaagtggtgtcca
ggaggagcctgggagctgcccaccactaacaggaaggctcctcatatgcccaggctgggt
ctcctggctgcctccacgtcagatggtcacatcactatctacagcctgcctcaccccgac
acactaatggcccgcaggaaacacaccgctaaaggtggagccagcccaacactgatgatc
tgccaggtacagggtgtgatcactctgaagcggggctccttcaagaccaaccacgatgaa
aagaataaccaggttctctccatggactggctgcctgtcaaacctcacaacatcctggct
gctggcttctatgacggtacggtggccctgtggaacctgtccagtaagtctattctgcag
cgggtgcgcgctccagaccgctccttcaccctctacccctaccactgcttcatcgcccac
gacaacgccacccgggccctcagtttctgccacgcatccagagacctcatggtgacggcg
ggtgatgacaggctggtgaagatgtgggacctgaggaggacctgggagccctgccagtcc
ttcaagcgcttcctctccaccgaggcagcctggcccctgcactgggctggggtcttcatc
tctcaggagagcacctacgccacgtttggccaacatggactcaattactttgactcaggg
tatctgggcttcaagccactctttctggtgccacggaaagggaccatgtggagcctgtcg
atctctgattggctgaacacagctgtgacggcggactcagtgggagacgtgatcatggtc
ctaatacccaacctgttcaacaacccctgctacctcaaacgatccatcgatcgcagattc
ccggtgttcagaaccgaaatggtccaattgaaagaagaagttgaggagaatgagggagga
gttggaagagcagagggaggagttggagaggaaggaagtggttccaccagtaacggaacg
tcccatcatacacctcagacctacagagagacagccaagaagtactacctccactaccac
gacatggacatgagaacgtttaagaatgtccagagccgagctccgtggaagcacatgcag
gttgcagaggccaaagggggactgtgtctggacctaatgcctttggcttcgctaactaag
gtccgtttcaaccccaacctgtgtgcccagagctgggtgttgtctgggggccaggcgggc
ctggtaagagcccactgcctcagggccatgaacagctctcacattaacaagatggtgcag
gagagccaggcccagttcagcaccgtgttcccccaggacacgacagacagccagggggac
gccagtgccgtccgacacacaacagaaaagctgtag
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