Salmo salar (Atlantic salmon): 106607983
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Entry
106607983 CDS
T04363
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106607983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106607983
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106607983
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
106607983
Messenger RNA biogenesis [BR:
sasa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
106607983
Transfer RNA biogenesis [BR:
sasa03016
]
Prokaryotic type
tRNA degradation factors
106607983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_KRR1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
106607983
NCBI-ProteinID:
XP_014061003
UniProt:
A0A1S3S9J9
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Position
ssa01:complement(68636377..68644967)
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AA seq
779 aa
AA seq
DB search
MCNVSFYLNMRHLLRLGPPLARLNVRLCHQSVWNSHGTIRKVGVDFGEKKLEISTGKLAR
FADGSAVVQLGDTTVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNHLRRELGTTE
NEILTSRLIDRAIRPLFPAGYFYDTQVLCNLLAVDGVNDPDVLAINGASAALSLSDIPWN
GPIGAVRIGLVNGEFLVNPTRKEMASSTINLIVAGAPLSQVVMIEASAENVLQQDFCHAV
KVGVKHTQQIILAIQQMAREAKVSKRTPPKIFSAPLEMIELARQLASEKVYAVFTDFTHD
KISRDDAINKVRLETEEQIKEKYPQAEPYEVMESFNMVSKEVFRNLVLNEYRRCDGRDLT
SLRNISCEADIFKPLHGSALFQRGQTQVLCSVTFDSLESSIKTDIITTALSGVKDKNFML
HYEFPPYATNEIGKMSGMNRRELGHGALAEKSLRPVIPKDFPFTIRVTSEVLESNGSSSM
ASACGGSLALMDAGVPISSAVAGVAIGLISKANPEKPSEIQDYRILTDILGIEDYLGDMD
FKLSGTNKGINALQADVKIPGLPLKLVMEAIQQATVAKREILGIMNKTIAKPRDKRKENG
PVVENVRVPVSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMNEAQEFI
TEICKDDQEQLLEFGAVYTATIMEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALG
LEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPAATVVKTLSEKQSISMGTGNVQATSTSS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaatgttagcttttacttgaatatgagacatttactgagacttgggcccccgctg
gcccgactaaatgtgcggttgtgccaccaaagcgtctggaacagtcatggaacgatacga
aaagtgggagtggacttcggtgagaaaaaacttgagatctcaacagggaaacttgccaga
tttgcagatgggtcggctgttgtgcagcttggggatacaacagtgatggtgacagctgtc
agcaaaacaaaaccgtccccctcccaatttatgcctctagtggtggactacaggcaaaaa
gcagctgctgctggtagaatcccaactaaccacctgcggcgggagttgggcactactgaa
aatgagattctgactagtaggctaatagacagggcaatcagaccgctttttccagctggt
tatttctatgacactcaggtcctgtgtaacctgttggcagtagatggtgttaatgatcca
gatgtactggccattaatggagcctctgctgctctatccctgtctgacattccctggaat
gggcccattggtgcagtgcgcattggcctggtgaatggagagtttctggtgaacccaaca
cgaaaggaaatggcttccagcactatcaacctgatagtggctggagcaccgctcagccaa
gtggtgatgatagaggcttctgctgagaatgtgttgcagcaggacttctgtcatgcagtc
aaggttggtgtgaagcacacacagcagatcatactggcaattcaacagatggccagagaa
gcaaaggtgtccaagcgcactcctcccaaaatattttctgctccactggaaatgattgag
cttgcacgacagttggcctctgaaaaggtctatgctgttttcacagacttcactcatgac
aaaatttccagagatgatgccattaataaagtaaggcttgaaacggaggaacaaataaaa
gagaaatatcctcaagcagaaccttacgaggtgatggagtccttcaacatggtatcaaaa
gaggttttccgcaatctggttttgaatgagtacaggaggtgtgatggaagagacctgact
tcattgagaaatatttcctgtgaggcggacatctttaagccccttcatgggtctgcactt
ttccagaggggacagacacaggttctgtgctctgtaacatttgactccttggagtctagt
attaaaacagacatcattactacggcgttaagtggagtcaaagacaagaatttcatgctt
cactatgagtttccaccttatgcaaccaatgagattggaaagatgagtggaatgaacaga
agagagcttggtcatggggcactggctgagaagtctttgagacctgtcattcctaaagac
ttccccttcactattagagttacctctgaggttctggagtctaatgggtcctcgtctatg
gcatcagcatgtggaggcagtctggctttgatggatgctggtgttcctatttcatcagct
gtggcaggtgttgctattggactcatatccaaggcaaacccagagaagccatcagaaatc
caggactaccgaatattgactgatattctgggaatagaggattacctaggagacatggac
ttcaaactgtcaggaacaaacaagggcatcaatgccttacaggctgatgtgaagattcca
ggcttacctctgaaacttgtaatggaggctattcagcaagccacagttgccaagagggag
attttgggcatcatgaacaagaccattgccaagccaagggataaaagaaaggagaatggc
ccagttgtcgagaatgtcagagtccctgtctccagacgagcacgctttgtcgggccaggg
ggatataacctccgcagactacaagctcaaacaggtgtgacgataagccaggtggacgag
gagaccttctctgtgtttgcacctactccaggtgccatgaatgaagcccaggaattcatc
acagaaatttgcaaggatgatcaagagcagctgctggagtttggtgctgtttacactgcc
accatcatggaaataagggacattggtgtcatggtgaagctatatcccaacatgagtgct
gttctgctccataactctcagctggaccacaaacggataaaacacccaagtgctcttgga
ttagaggttggacagcagattcaggttaaatactttgggcgagacccaacagatggtaga
atgaggctttcgaggaaggtgttacaatctccagcagcaacagttgttaagacactgagt
gagaaacagagcatctccatgggcacagggaatgtccaagcgaccagcacctcctcttga
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