Salmo salar (Atlantic salmon): 106607991
Help
Entry
106607991 CDS
T04363
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106607991
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106607991
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
106607991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NUP159_NUP214
Lgl_C
KNTC1_N
Beta-prop_VPS8
Beta-prop_Vps41
CFAP43_N
Beta-prop_WDR35_TULP_N
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
106607991
NCBI-ProteinID:
XP_014061021
UniProt:
A0A1S3S9K9
LinkDB
All DBs
Position
ssa06:complement(65899384..66047573)
Genome browser
AA seq
1149 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSVSSGQSGAPENNLMHETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQRRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYEAGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSRQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQARSPRKTRQPAGGNGLCDINEGSASEDRCKSPTSVLA
SNHQQFYNGGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSV
TSIDKEAREAITSFHFCETFARKGDSAITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPV
IVLPSGTLARLKGSILRMAFLDNTGTFLPPAFETWYEPNAAGADSEERDKARKRRPVSVS
PSTSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACF
CANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQET
CENLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGETQAGKASRGLAQHIP
GPQGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLK
CKDKKWYQF
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctaaaggagcaggcgtcttcctct
gtttcgtctggccagtcgggcgccccggagaacaatttgatgcacgagacccttcagtcc
gagaattttcagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagcggggccctcagactg
tttggtcgtccaggtgtggagtgctactgtcaacatgagagtggggcagccgtcatctcg
ctacagtttctcatcaatgagggtgcgctggtgagtgctctggcagacgacagcgtgcac
ctctggaacctgaggcagaggaggcccgccatcctccactcactcaagttcaacagagag
aggatcacattcgtccacctgccattccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtcgttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgaaggaaagcttatcattggatatgaggctggaattgtggtcttgtgg
gatctgaaatctaagaaagcagactaccgctacacttacgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacatcaagggccagggcaagccatttcagacaatcaccccacatggaaagcagccc
aaggatggaaagaagccagagccctgcaaacccatcctcaaagtggagtacaagaccact
agactgggagaccccttcatgatcctgtctggaggtctgtcgtatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactatcct
atcgtagacttcctcacgctctgtgagacgccatactctaacgattttcaggaaccttat
gctgtagtggtccttctagaaaaggatttagtagtaatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccatccatgagtctccggttacctgctgtgag
tactttgctgactgccctgtggacctcatacccgcactttactctgttggctccagacag
aaacgacagggctacagcaaaaaggagtggccaatcagtggtggtaactggggcctcggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gacgcttctgcaataatgctccaggtactgtacaagctgaagacagccaaggtgtttgag
aagagcaggaacaataaggaggacaagcagaacacagagattgtggatgaggacccgttt
gccatccagataatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtcc
gccaacctcatcatataccgcttcagcaggcaggagatcaccaccgaggtcgtacagctg
ttggaggtacgtctgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggggaccgtgacctgcccaccccaggagcagcctcacctagcccccagaccaccgga
cccccgactcacccctccaccagcagcaactcctctgacggggttcgagacaacgtaccc
tgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttggtg
gtgcagctggtgtgggtaagtggagagcccccccaacagatcaccagcttggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatggtctggcagtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaatgatccctac
cagagacaggctcgctctccacgcaagacacgccagcccgccggaggtaatggtctgtgt
gacatcaacgagggttctgcctcggaggaccgctgcaaatctcccacttcagtgttggcg
tcaaaccatcagcaattctacaatggaggtgggggtagaggagcaaagatgtcacggaaa
ttaagcttgcctactgagctaaagccagacttggtcctcctgtctgtatgtcctccacgg
ggcgccaacccattagaccaccgagacaactccttcagccgttcacgctcctcctccgtc
acgtccatcgacaaggaggcgcgcgaggccatcacctccttccacttctgtgagacattc
gcccggaagggggacagcgccatcacaccatgcctgtacgtgggaacctccctgggaaca
gtgctggctgtggccctcaacctgccccctgctggggaacaaaggctgctgcagcccgtt
atcgtcttgcctagcggtaccctggcacgactgaagggcagtatcctgaggatggccttc
ctggacaacacaggaaccttcctcccccctgccttcgagacctggtatgagccaaacgcc
gcgggcgccgacagtgaggagcgagacaaggcccgtaaacgccgcccggtctctgtgtca
ccctccacctcccaggagctgcaggagagccagtatgcggtggtgtgctctgagaaacag
gctaaggtcatagcactgccctcacagaactgcatcttcaaacacagcatcacagagaca
tcgttcgtcctgagggctgatgtggtccagatgaacatagggaactgtgtggcctgcttc
tgtgctaacggacacatcatgaccctcagtctgccggggctgagaccgttgctggatgta
aactacctgccactgacagacatgcggatagcccggaccttctgctttaccaacctgggc
caggccatgtacctcacctcccccactgagatacagaggatcacatacagccaggagacc
tgtgagaacctgcaggagatgctgggagaactgttcacaccagtggaaaccccagaggct
cccaaccgaggattcttcaagggcctttttgggggaggagcaacttccctggacagagag
gaactatttggtgagacgcaggcgggtaaggcgtcccgtggccttgcccagcacatccca
ggtcctcagggcctggagggcatgaagggggcagcctcgggcgtggtggcggacctggcg
cgtgcccggatagcactggatgagagagggcagaaactgggcgagctggacgagaggacg
gctgccatgttggccagcgccgactcctttggcaaacacgcccatgacatgatgctgaag
tgcaaagacaagaagtggtaccagttctga
DBGET
integrated database retrieval system