Salmo salar (Atlantic salmon): 106608019
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Entry
106608019 CDS
T04363
Symbol
gen1
Name
(RefSeq) GEN1, Holliday junction 5' flap endonuclease
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106608019 (gen1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106608019 (gen1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
106608019
NCBI-ProteinID:
XP_014061125
UniProt:
A0A1S3S9W9
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Position
ssa06:complement(67293581..67300508)
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AA seq
979 aa
AA seq
DB search
MGVHDLWSILGPVRESVPLYSLTGMTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKAETMSKRKDMRFGGFDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDTFLYGARTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLAILLGCDYIPKGIPGVGKEQALKLIQTLKGQTLL
QRFSQWREEGVVAPEWILKKVPHCHLCRHPGSAKAHERSGCVLCDSKHFCEPQDYDYQCP
CHWHRCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKWRKPNMLLMQ
NFAYNKMEWPKHYTSEKVLVLMTYTELMNRKHGRATSSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVERYLREKAENKTKKKKPKGKKD
KPSDHCDVSDLLAKMSLHSSTADNNTQQPSAAAEALTITTITPSNNSVLVLEGPESESPK
KHLDPGKHHPRLEVRLGAQIQEVMSPLSFTSSGKIPEAVASSPSVSMVMDALHLSDIDWE
SQSFTSSPPPQAAGACTATDPKSLQTTNDSVEERITKLGPSTDLRAAEAVPGPCYAECSL
RDRVLMRNTCKSVNMADNDDVTTIHVNSQSAAPLDLIDNNNSGPKPMALIAIKSSNDSKP
SEQPLVCGKKDTLVDKDQSIALPHKPQPAHRSSKPISLNSTQTGPFTSTQTSPVTATQTQ
GAKQHGAGEPKPPQKYRFVKKAISSSSALPQRSHSEPSNTQPGQGDRNMKSHQETKKSVC
ASVCSSSEDSDTENQCRGGGQSRAKVKPKSRPRCQYLTDYSLKPTSKPSTSTKAAWDTVT
AQPLRPRAVSASMGEQPIIGSSVSTIGKCQDVPPIRVDDDIVFIPSPVSPVTMSDGDDSV
ICSKSPLPLAERVKLKFLK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgacctgtggtccattctggggccggttcgggagtcggtgccgttgtac
agcctcaccggaatgactctggccgtggaccttagcttgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgtttttcagagtt
tcctctctcacactgatgggggtaaagctagtttttgtcatggagggagaggcccccaaa
ctcaaagcagagaccatgagcaagaggaaagacatgagattcggggggttcgacaagtca
gcccctaaaaaacaaactacaaaaaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcggcaggggaggcc
gaggccatgtgtgcctttctggatgcccagggcctggtggacggctgcatcaccaacgat
ggggacacttttctttacggagcgcggaccgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacactcgtgggtctggccatccttctgggctgtgattacattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcatacagacattgaaaggacaaacactttta
caaagattcagccagtggagggaggagggcgtggttgcgccagagtggatcctaaagaag
gtccctcactgccatttgtgtcgccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgagcctcaagactatgactaccagtgtcct
tgtcactggcaccgctgtgagcagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaatggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatggagtggcctaagcactataccagtgagaaggttctggtc
ctgatgacgtacactgagctgatgaacagaaaacatggaagagcgacgtcatctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagccaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacacgtggtggagcgg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagac
aagccttcggatcactgtgatgtttctgacctcctggccaagatgtctttgcacagttcc
actgctgacaacaacacccaacaaccctctgccgcggcagaagcactgaccattacaacc
attacaccaagtaacaactcagtgttggtcctggagggtccagagtcagagtctccaaaa
aagcatctggatcctggtaaacaccatccccgcttagaagtacgtcttggagctcagata
caggaagtgatgtcacctctgtctttcacttcctctgggaagattccagaagcagtggcc
tcctctccgtctgtttccatggtaatggatgctcttcacctgagtgacatcgactgggag
tctcagtcattcacgtcctccccacccccgcaggctgctggtgcttgcactgccactgac
cccaagtcactccaaaccacaaatgatagtgtcgaagaaaggatcacaaaactgggcccc
tctactgatctcagagcagcggaagccgtaccagggccatgttatgcagagtgttcgctg
agggacagggtcctaatgagaaacacctgcaagtctgtgaacatggcggacaatgatgat
gtcaccaccatacacgtaaactcccagtcagcagcacccctggatttaattgataataac
aacagcggccccaagccaatggcactgatagccattaaaagcagcaatgattccaagcca
tcagaacagccgctggtgtgtggcaagaaagacacacttgttgataaggaccagagcatt
gcattgccccataagcctcaacctgctcatcgcagctcaaaacctatctcattgaactca
acacaaacaggcccatttacctcaacacaaacaagcccagtcacagcaacacaaacacaa
ggggctaaacaacatggtgccggtgaaccaaagcctccacagaagtacagattcgtaaag
aaggccatatcatcatcttccgctctgccacaaaggagccactctgaacctagcaacaca
cagcctggtcagggtgacaggaacatgaagtcacatcaagaaaccaagaagagtgtgtgt
gccagtgtgtgttcatcgagtgaggacagtgacacagagaaccagtgtcggggaggaggg
cagagcagggccaaagtcaaacccaaaagcaggcccaggtgccaatacctcacggactac
tcactgaaacccacctccaaacccagcacctctacaaaggcagcctgggacaccgtgacc
gcccagcccctcaggcctagagctgtgtctgccagtatgggtgaacaaccaataataggc
agctctgtgtctaccatagggaagtgccaggatgttcctccaattagagttgatgatgac
attgtgttcattccaagccccgtttccccagtgactatgtctgatggtgatgactcagtg
atttgcagcaagagcccactgccattggcagagagggtgaagctgaagttcctgaaatga
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