Salmo salar (Atlantic salmon): 106608059
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Entry
106608059 CDS
T04363
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04517
IgSF CAM signaling
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106608059
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106608059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106608059
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106608059
Intermediate filaments
Intermediate filament-binding proteins
106608059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
CH_2
PH_11
Motif
Other DBs
NCBI-GeneID:
106608059
NCBI-ProteinID:
XP_014061214
UniProt:
A0A1S3SA45
LinkDB
All DBs
Position
ssa01:complement(68976590..69094846)
Genome browser
AA seq
2360 aa
AA seq
DB search
MELQRATSMPGPLSPGPIFPGSHSPGPLSPSSGPGPSLASSPGPDPGYSAKQAAFNYNQL
EGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
IRVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLID
FDKLKKSNAHHNLQNAFNLAEQHLGLHKLLDVEDISVDHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDNAIETDNMIQKYESLASDLLEWIEQTIIILNNRRFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPRDGKLISDINKAWERLEK
SEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAAT
KKHEAIETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARR
IRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHTLVEADIAIQA
DRVKAVNNNAQKFAIDAEGYKPCDPQVIRDRVAHMDFCYAELSQLAAERCARLEESRRLW
KFFWEMAEEEGWIREKEQILSSEDCGKDLTGTVRLLSQHRAFEDEMIGRAGHLQQTIKQG
EELVAADHFGADKIRERIQDIQEQWAALERLSAVRKARLEEACNLHQFQADADDIDTWML
DVLRIVSSADVGHDEFSTQALVKKHKDVAEEIAGYRPVIDALHEQSKTLPGEQTGSEEVQ
GRLSGIEERYKEVAELTRLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKL
EDLEVVQHRFESLEPEMNNQASRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFR
DLVDLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGM
ERDLTAIEDKLGELGKEGERLAAEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEA
SKLQQFLRELDDFQSWLSKTQTAIASEDMPNTLTEAEKLLAQHEGIKNEICNYEVDYQKM
RDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQA
EAFLNNQEYVLAHTEMPTTLEGAEGAIKKQEDFMTTMDANEEKINAVVDTGRRLVSDKNI
NADRIQEKVDSIDERHKKNRLAASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDM
SYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETEAMVKEKLAALHKM
WDDLESTTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKK
QQMLESQVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLKKRKGNL
MASREIHQFNRDVEDEILWVEERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRC
DDIFERSQQVLKDDDNSPSGEGIRQRLADLRRLWAQILEETGKRHGRLEEAHKAQQYYFD
AAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLAA
AGHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVV
AGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHADAATIAEWK
DGLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVE
TLQRMHTTFEHDIQALGTQVRMLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEAC
DGRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEI
DARNDSFTNCIELGKSLLARKHYALEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVH
QFGRDAGVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLT
TMELLEVRRQQEEEERRRNPPPAETQTDTASPQQKEGEQVSLNGLPSDQDSPRDNGEGSD
IVNGVAEPSPGGSPSAARKGKPSQAATLPAKSLDSTPANQMEGILHRKHEWEGHNKKASS
RSWHNVYCVINNWEMGFYKDIKSASQGIPYHNQIPISLKDAACEIALDYKKKKHVFKLKA
TDGNEYLFQAKDDEEMNSWMQAISSAACSDKTEMTPSSHSTPASSRAQTLPASVALATES
SPGKREKDKEKRFSLFSKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagcatgcctggccccttgtccccagggcctatctttcca
gggtcccactccccagggcccctgtccccttcctctgggcctggcccctctcttgcctcc
agccccggccctgatccgggctactctgctaaacaggctgccttcaactacaaccaactc
gagggccgttttaagcagctgcaagatgagcgtgaagcagtgcagaagaagaccttcacc
aagtgggtcaactcccacctagccagagtgtcctgcaggatcactgacctctatatggac
ctgagagatggacgcatgctcatcaaactactggaggttctctctggggagaaactgccc
aagcccactaaggggcgcatgcgtatccactgcctggagaacgtggacaaggccctgcag
ttcctcaaggagcagagggtccacctagaaaacatgggctcccatgacattgtcgacggc
aaccaccgcctcacccttggcctcatctggaccatcatcctccgcttccagatccaggac
atcagagtggagacggaggataacaaggagaagaagtcggctaaagatgctctgctgctt
tggtgccagatgaagaccgcaggatatcccaatgtaaacattcacaacttcagcaccagc
tggagggatggcatggctttcaacgccatcctccacaaacacagacctgacctgatagac
tttgacaagctgaaaaagtcaaatgcccaccacaacctgcagaatgccttcaacctggca
gagcaacacctgggcctccacaagctactggacgtggaggatatcagcgtggaccaccct
gatgagaagtccatcatcacctatgttgtgacctactaccactacttctccaagatgaag
gccctgaaggtggagggcaaacggattgggaaggtgctggacaatgccattgagactgat
aacatgattcagaaatatgagagtctggcctctgacctcctggaatggattgaacagacc
atcatcatcctcaacaaccgcaggtttgccaactccctagtgggggtgcagcaacagctt
caggccttcaacacctaccgtaccgtggaaaagccgcctaagttcactgagaaaggcaac
ctggaggttctcctcttcaccatccagagcaagatgagggccaacaatcagaaggtctac
atcccgcgggacggcaaactcatctcagacatcaacaaggcctgggagaggctggagaag
tcagagcatgagagggagctggcgctaaggacggagctgattcgtcaggagaaactggag
cagctggcccgccgctttgaccgcaaagccgccatgagagagacctggctgagtgagaac
caacggctcgtctcacaggacaactttggcttcgacctgcaggcggtggaggccgccacc
aagaagcacgaggccatcgagacggacatcggcgcctacgaggagcgtgtgcaggcagtg
ctctccgtggccaaggagctggaggcagagaactaccatgacatcaagcgcgtgactgcg
aggaaggacaacgtgctgcgtctgtgggagtacctgttggagctgctgaaggcccggcgc
atccggctggagatgaacctgggcctgcagagggttttccaggagatgctttacatcatg
gactggatggatgagatgaagatgctgctgctgtctcaggactatgggaaacacctgctg
ggagtggaggacctgctgcagaagcacactctggtggaggctgatattgccatccaggcc
gaccgcgtcaaagccgtcaacaacaacgctcagaagttcgccattgatgcagagggctat
aagccctgtgacccccaggtgatccgggaccgagtggcccacatggacttctgttacgca
gagctgagccagctggccgccgagcgctgcgcccgcctggaggagtcccgccgcctctgg
aagttcttctgggagatggccgaggaggagggctggatccgggagaaagagcagatcctg
tcctcggaggactgcggtaaggatctgacgggcaccgtgcgtctgctgagccagcaccgc
gccttcgaggatgagatgatcggccgcgccggccacctgcaacagaccatcaaacaggga
gaggagctggtggccgccgaccacttcggagccgacaagatccgtgagcgcatccaagac
atccaggagcagtgggcggccttggagaggctatctgccgttaggaaggcccggctggag
gaggcctgcaacctgcaccagttccaggctgacgccgacgacatcgacacctggatgctg
gatgttctccgcattgtgtccagtgccgacgtgggccacgacgagttctccacccaggcc
ctggtcaagaagcacaaggatgtggccgaggagattgccggctaccgacctgtcatcgac
gccctgcacgagcagtccaaaaccctgcccggggaacagactggctcagaggaggtgcag
gggcgcctgtcaggcatcgaggagcgctataaggaggtggctgagctgacccggctgagg
aagcaggccctacaggatgccctggccctctacaagatgttcagcgaggcggacgcctgt
gaggtgtggatcgatgagaaggagcagtggctcaacagtatggagataccagagaaactg
gaggatctggaggtggttcagcacaggtttgagagtctggagccagagatgaacaaccaa
gcttcccgcgttgccgtggtgaaccagattgctaggcaactcatccacagtggtcacccc
agtgaaaaggagatcaaagcccaacaggacaaactcaacaccagatggagccagttccgt
gacctagttgacctgaagaaagactccctcaactcagctctgggtgtacagaactaccac
ctggagtgtaacgagaccaagtcgtggattcgcgagaagaccaaggtgatcgagtccacc
caggagctgggcaacgacctggccggggtcatggccctgcagcgcaaactcaccggcatg
gagcgcgacctgaccgctatcgaggacaagctaggagaactggggaaggagggggagcgc
cttgcagccgagcaccccgaccaagcccagggcatcatgggtcgtctgggggagatcaca
ggagtgtgggacgagatgaagggcaccctgaagaaccgcgaggagtccctgggcgaagcc
agcaagctgcagcagttcctccgggagctggatgacttccagtcatggctgtccaagacc
cagacggccatcgcttcagaagacatgcccaacacactgacggaggccgaaaagctgctg
gcgcagcacgagggcatcaagaacgagatctgcaactatgaagtggactaccagaagatg
agggacatgggggaaatggtgacccagggccagacggacgcccagtacatgttcctgagg
cagaggctgcaggccctggacacaggctggaacgagctgcacaagatgtgggagaaccgt
cagaacctgctgtcccagtcccatgcccaccagctgttcctcagggataccaagcaggct
gaagccttcctcaacaaccaggagtacgtgctggcccacactgagatgcccacgactctg
gagggggcagagggcgccattaagaagcaggaggacttcatgaccaccatggatgccaac
gaggagaagatcaatgccgtggtggacaccggacgcagactggtcagtgacaaaaacatc
aacgctgaccgcatccaggagaaagtggactctatcgatgagagacataagaagaaccgc
ttggcggccagtgagcttctctgtaagctgaaggataacagagacctacagaagttcctt
caggactgccaagagctgtccctgtggatcaatgagaagatgctcacggctcaggacatg
tcgtacgatgaagccaggaacctccacagcaaatggctcaaacaccaggccttcatggcc
gagctgcagtccaacaaggagtggctggacaagatcgagaaggacgggatgcagctgata
gctgagaagccggagaccgaggccatggtgaaggaaaagctggcagcactccataagatg
tgggatgaccttgagtccaccacccagactaaggccaagtgtctgtttgacgccaacaag
gccgagctgttcacccagagctgtgccgacctggacaagtggctggtgggagtggatgga
cagatccaatcagacgactacggcaaagatctgaccagcgtcaacatcctgctcaagaaa
caacagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagagc
caggcccaggtcctcagccaggaggggaaggacacggacgaggtggacggccagcgccgc
atcgtggagaagaagttccagcagctgctggacccactgaagaagaggaagggaaacctc
atggcctcccgcgagatccaccagttcaacagagacgtggaggacgagatcctctgggtt
gaagagagaatgccactggcaacatctacagaccacggaaacaacctgcaaacagtccag
ttactcatcaagaaaaaccagaccctgcaaaaggagatccagggccaccagccgcgctgt
gacgacatctttgagcggagtcagcaggtgctgaaggatgacgacaacagccccagcggc
gaggggatccgccagcggctggccgacctgcggcgcctgtgggcccagatcctggaggag
acgggcaaacgccatggacgcctggaggaggcccacaaggcccagcagtactactttgat
gctgccgaggctgaggcctggatgagcgagcaggagctctacatgatgtcagaggagaaa
gccaaggatgagcagagctccgtggccatgctgaagaagcaccagatcctggagcaggct
gtggaggactacgctgagactgtccaccagctctccaagaccagcaggggcctggcggcc
gccggacacccagaaagtgaacggatcggcatgcgtcagtcccaggtggataagctgtac
gcggggctcaaggacctgtcggaggagaggagggggaagctggacgagaggttccgtctg
ttccagctcaatagggaggtggatgacctggagcagtggatcgctgaaagggaggtggtg
gctgggtcacatgagctgggacaggactatgaacatgtcacgatgctgcaggagcgtttc
cgtgagtttgctcgcgacacgggcaacatcggtcaagagcgtgtggacactgtcaaccag
ctggcggacgagctcatcaactcgggccacgcggacgcggctaccatcgccgagtggaag
gacgggctgaatgaggcatgggccgacctgctggagctgattgacacacgcacgcagatc
ctggcggcgtccttcgagctgcataagttctaccacgacgccaaggagatcctcaaccgc
atcctggacaaacacaagaagctgcctgaggagctgggccgagaccagaacacagtggag
accctgcagaggatgcacaccaccttcgaacatgacatccaagccctggggacacaggtg
aggatgttgcaggaggatgctgtgcgcctgcagtctgcctatgccggagataaggctgat
gacatccaaaagagagagggtgaggttttggaggcctggagaacactgctggaggcctgt
gacggccgcagggtcagactgctcgacaccggcgacaagttccgtttcttcagcatggtc
cgagacctcatgctctggatggaggacgtcatccgcctaatcgaggctcaggagaagccc
agggatgtgtcgtctgtggagctcctgatgaacaaccaccagggcatcaaggctgagatt
gacgcccgtaacgacagcttcaccaactgcatcgagctgggcaagtccctgttggcacgg
aaacactacgcattagaggagatcaaagagaagttactacagttgacggacaagaggaaa
gacatgattgacaagtgggaggacagatgggagtggcttagattggttctggaggtgcac
caatttggaagggacgcgggtgtggccgagtcgtggctgctgggacaggagccgtacctg
tccagcagggagatgggtcagaacgtggatgaagtggagaaactcatcaagagacacgag
gcctttgagaagtcagctgccacctgggaagagcggttctctgcgctggaacggctgact
acgatggaattactggaagtgagaagacagcaagaggaggaggagaggaggagaaatccc
ccacctgcagagactcagacggacactgcatcgccacagcagaaggagggtgagcaagtg
tctctgaatggactgccatcggaccaggactcccctcgggacaatggggagggaagtgac
attgtaaatggggtggcggagcccagcccaggcgggtcacccagtgcagcacgcaagggc
aaacccagccaggctgccacgctcccggcaaagtccctggactcaaccccagccaaccag
atggaaggcatcctgcaccgcaaacatgagtgggagggtcacaacaagaaggcatccagc
agatcctggcacaatgtgtattgtgtgatcaacaactgggaaatgggcttctacaaagac
attaagagtgccagccagggcatcccctatcacaaccagatccccatcagcctgaaggat
gctgcatgtgagatcgccctcgactacaagaagaagaagcatgtgttcaaactgaaagct
acagatgggaatgagtatctcttccaagccaaagatgacgaggagatgaactcgtggatg
caggccatctccagtgctgcgtgctctgataagaccgagatgacccccagcagccatagc
acccccgcctccagccgagcccagaccttgcccgcctctgttgccctggcaaccgaatcc
agcccaggcaagcgcgagaaagacaaagaaaaacgcttcagccttttcagcaaaaagaag
tag
DBGET
integrated database retrieval system
