Salmo salar (Atlantic salmon): 106608158
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Entry
106608158 CDS
T04363
Symbol
SFRS5
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106608158 (SFRS5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106608158 (SFRS5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106608158 (SFRS5)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106608158 (SFRS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
106608158
NCBI-ProteinID:
XP_014061403
UniProt:
A0A1S3SAM5
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All DBs
Position
ssa06:76242968..76250200
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AA seq
326 aa
AA seq
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MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRRTNQPSGQPSA
RNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLK
NALEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSH
SPKSRSPKRDYNRSHSRSHSGSPAPRGAAPGSPPPRAKETSSSSSKRPSKPSKSASPHSP
PPAQRAPSRSPSRSRGSRSPSTDSRH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgcatattcgtcggccggttgaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctgaagaggggctttggt
tttgtggagtttgatgatcctagggatgctgaggatgcagtttatgagttggacggcaag
gagctctgcaatgagagggtgacaattgagcatgctcgtgtgcgcctgcgtggtgggcgg
ggacgtggtggtgacagaggaggaggtggaggaggaggaggaggccgcttcccagatcgc
tatggccgtggctcccaggatagtcggaggaccaaccaaccaagtggacagccgtcagct
aggaaccccccaccgatgcgtacggagaaccgtctcatcgtggagaacctgtcatctcgc
gtcagctggcaggacctgaaggatttcatgagacaggctggggaagtcacgtttgcagac
gcccaccgccccaagctcaacgaaggagtggttgagttcgcttcttacagtgatctgaaa
aacgcccttgagaagctgtctggcaaggagatcaatggaaggaagatcaagctgattgag
gcagcaaagaagaggggttcaaggagtcgttcccgctctgagagctcttctcgttcccgc
tcccgttctcgtaatcgttccccgtcccgctccaggaccccccgtcgttccaggtcccac
tcccccaaatcccgctcccccaagagggactacaaccgctctcattctcgttcccacagc
ggctccccagccccccgtggtgccgctcccggctccccaccccccagggccaaagagacc
tcttcctcctcctctaaacgaccctccaagcccagcaagtctgcctccccccactcccct
ccccctgcacagcgtgcaccttccaggtctccttccaggtctcgtggctctcgctctccg
tctacggacagccgccactga
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