Salmo salar (Atlantic salmon): 106608413
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Entry
106608413 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106608413
03036 Chromosome and associated proteins [BR:
sasa03036
]
106608413
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106608413
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106608413
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106608413
UBL E3 ligases
106608413
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106608413
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106608413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
GRP
RING_XB3-XBAT31
zf-ANAPC11
Rad50_zn_hook
DUF7385
Motif
Other DBs
NCBI-GeneID:
106608413
NCBI-ProteinID:
XP_014061819
UniProt:
A0A1S3SBV0
LinkDB
All DBs
Position
ssa07:complement(704448..713999)
Genome browser
AA seq
623 aa
AA seq
DB search
MTPTKMKLRVRRRESGGGGGQEQEETSKASSQSVSAEASPDSKCPICLDRFNNMSYLDRC
LHRFCFQCIQEWSNNKVECPLCKQPFSSILHSIKAQDNFKEFTLRPPPVPAENGTAMIAA
AEAAAAAALVTARVGGSHGERRRTRRRGGGQGRGGRERRQSGRLWRGRGLSSEPPLPPLH
PPLLPRPEDGGMRGEMDGEDPGVIFDGLTGASAPPPHDRGVQRLMVRLAVRRRSQREGRS
VRPLRPREMLAFRRALYRSGVRVRNARGGCERPRDITAAFYQRNPVALHRLLPWLQRELT
VLYGAHGSLVNIVQRIITSRITRHDMEGGGGAIQDELRPFLLARTDHFLHELISFARSPL
SMEVYDQLSIYDPPAPSYEDRMTSSSSDTDDSVIAISDEEEEEGGSEGERERRPLSVAGS
SALSQSAWDGETPGPSYSTAKPSQSPMPLSISPGGRDCGPAGANQNPAQDTTAAGDGERV
EEGGEEEEGEQCMIVGFVKAMAERTPELVQLSSDPSDEEGEKQEKKETVPQTALNPLSLV
IPPLSTPVPPIALFTNASTERQGGGGERQGGGGERQGGGGENRQHSRRSPRSDKPGGKRK
YKTRHLEDPSWEPPSSARTRMGR
NT seq
1870 nt
NT seq
+upstream
nt +downstream
nt
atgacccctaccaagatgaaactgcgtgtgcggaggagggagagcggaggaggaggtggt
caggaacaggaagagacctctaaggcttcctctcagtcggtttcggccgaggcgtctcct
gactccaaatgcccaatctgtctggaccgcttcaacaacatgtcttatctggacaggtgc
ctccatcgcttctgcttccaatgcatacaggagtggagcaacaacaaggtggagtgtccg
ctgtgtaagcagccgttctcctccatccttcactcgatcaaggcccaggacaactttaaa
gagttcactctcagaccaccacctgttcctgcggagaacggaaccgcaatgatcgcagct
gccgaagcagcagcagccgctgccttggtgaccgccagggtaggtggtagtcatggagaa
cgaaggaggacgcggagaagaggaggaggacaggggagaggagggagagagaggagacag
tcaggacgactgtggagagggaggggtctgtcttctgaacctcctctccctcctcttcat
cctcctcttctacccaggcccgaggatggagggatgagaggagagatggatggagaggac
ccgggggtcatctttgatgggctgacgggggcgtccgcgcccccacctcacgatcgaggg
gtgcagcgtctcatggtgcgcctggccgtcaggcgacgatctcagagagagggccgctcc
gtgagaccgctccgaccacgggagatgctcgctttccgccgggcgctctaccgcagtggc
gttcgtgtcaggaacgcccgcgggggctgcgagaggccccgtgacatcactgcggcgttt
taccagcggaacccggtggctctccatagactcctcccctggttacagcgggagctgacg
gtgctgtacggcgcccacggctcattggtcaacatcgtccagcgcatcatcacctcgcga
atcacacgtcacgacatggagggagggggtggggccatccaggacgaactccgtcccttc
ctgctggcgaggactgatcacttccttcacgagcttatcagttttgcacgttcccctctc
agtatggaagtgtatgaccagctgtccatctacgaccctccagcgccgtcctacgaggac
aggatgacgtcatcatctagcgacactgacgactccgtcatcgccatctcggatgaagag
gaagaggaaggagggtcggagggagaacgagagagacggccgttgtccgtagcaggaagt
agcgctctgagccaatctgcttgggacggtgaaacaccaggaccctcctactctacagct
aagccgtcccaatcccccatgccgctgtcgatcagcccaggggggcgggactgtggtcca
gcgggggctaatcagaatcctgctcaggacacgacagcggcaggggatggagagagggtt
gaggaaggaggagaggaagaagagggggaacaatgtatgatagtagggtttgttaaagcc
atggctgagagaactcctgaactggtccaactctcctctgacccctcagacgaagagggg
gagaaacaggagaagaaagagactgttccacaaacggcgttaaaccctctctctctcgtt
atccctcccctctccactcctgttccccccatcgctctgtttacaaacgccagcacagag
agacagggaggagggggggagagacagggaggagggggggagagacagggaggaggaggg
gagaacagacagcattcccgacgttccccgcgctccgacaagccgggagggaagaggaaa
tacaagacacggcatctggaagacccttcctgggagccgcccagctctgcgcggacacgg
atggggagag
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