Salmo salar (Atlantic salmon): 106608564
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Entry
106608564 CDS
T04363
Symbol
sorcs2
Name
(RefSeq) sortilin related VPS10 domain containing receptor 2
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106608564 (sorcs2)
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Others
Others
106608564 (sorcs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
InlK_D3
DUF6786
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
106608564
NCBI-ProteinID:
XP_014062008
UniProt:
A0A1S3SCD4
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Position
ssa07:8318520..8607849
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AA seq
1033 aa
AA seq
DB search
MEVILILTKYYHVDSSKVLESSLWRSSDYGTTYTKLNLMPGTTIVVSNFYICPTNKKKVI
LVSSSINERDQLLFISTDEGSSFQRQPLSFTAETLLFHPKEEDKVLAYCKEGKLYVSMDL
GRKWTLMQERVTKGRIFWSVADVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKTVTAQF
LGKIDHHSLSVQDDYIFVKVTTGNRTKHYVSYRRNDFVQMSFPKYALPKDVYIVSTDESQ
VFLALQEWYQTDSFNLYQSDPHGVYYSIVLENVRSAKQPEESVLIDILEVRGIKGVFLAN
QKVDGKVRTLITYNKGRDWEPLAPPSTDMNGKPVNCKSPDCHLHLHLRWADNPYVSGTVH
TKDSAPGLIMGAGNLGSQLVEYKEEMYITFDCGKTWRQVFEEEHHILYLDHGGVIVAIKD
TSIPLKILKFSIDEGRTWTIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVK
VDFRQSFPRQCTEGDYDSWKLTDLQGEKCIMGQERSFRKRKDTAFCIKGRSYTSALTTKP
CQCSEKDFNCDYGFERAQSLKTEGDRCFADFWHDPDSPPDNCHQGHNFESSTGYRKVVSN
LCEGGVNKQQSGKQHTCPLLPPRGLQLGIKGQMLAVAPGDDITFIVHQEQGDTSSTKYQV
DLGDGMRAIYQNLTVTDEPIQHRYKQQGVYRITVKAENMAGHDQATIYIQVTAPLQEVHL
EVVPIAGINQEVNLTAVVLPFEANLTVFYWWIGDNLQPKMSLGNSLITRFPEEGEVSVTV
QASNGRSMVQNTKNVHVYDRFQVIPLAFSSNLDRLNPNIPEWREDVGQVVTKILAKITGI
PQVSLVTMVKRGLPTTADLYVLPPESQRAKWSVFVDKRIPAIKQAFNDNNVSFIVRGGLQ
VLVKLADPNAGSQGGVAGPGVWALAVIFLISLLATGSFILYKFKSPWLRTEDAYPPLFFR
KLPGRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGNAEGNHSGVVL
SINSRELHSYLTS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcattctcatcctgaccaagtattaccacgtcgactccagcaaggtcctggag
agctccctctggagatccagtgactatggcaccacctacacaaagctcaacctgatgcct
ggtacaaccatcgtggtctctaacttctatatctgccccaccaacaagaaaaaggtgatc
ctggtgagctcgtccattaatgagcgggaccagttgctgttcatcagtacagacgagggc
tcctctttccagcgccagcccctctccttcactgctgagaccctcctcttccaccctaag
gaggaggacaaggtgctggcttactgcaaggagggcaagctctatgtgtccatggatttg
ggccggaagtggactctaatgcaggaacgagtaaccaagggcagaatattctggtctgtg
gctgatgtagatgtggatcctgacttggtgcatatggagatgcaggacacaagtggaggg
tacctgtatgtaacctgtctgatccagaactgctcagacaagacggtgacggcccagttc
ctggggaagattgaccaccactctctctcagtccaggacgactacatctttgtcaaggtg
accacaggaaaccgcaccaagcactacgtctcataccgacggaacgactttgtccagatg
agtttccctaaatacgccctgccaaaggacgtctacatagtgagtacggatgagagccag
gtgttcctggccctgcaggagtggtaccaaacagacagctttaacctgtaccagtcggac
ccgcatggtgtctactactccatcgtgctggagaacgtccgcagcgccaagcagcctgag
gagagcgtccttatagacatactggaggtgcgcgggatcaagggggtcttcctggccaat
cagaaggtggatggcaaagtgcggactctcatcacctataacaaaggccgagactgggaa
ccgctagccccgcccagtactgacatgaacggcaaaccggtcaactgcaaatcacctgac
tgtcacctccacctccacctgcgctgggctgacaacccctacgtatcagggaccgtccac
accaaagactccgcccccggactcatcatgggcgcaggtaacttgggttcccagctggtg
gagtataaagaagagatgtacatcacctttgactgtgggaagacctggaggcaggtgttt
gaggaggagcatcacatcctgtacctggaccatggaggggtcatcgttgccatcaaagac
acctccatccctctcaaaatactcaagttcagtattgatgagggacgcacctggaccatc
cacaacttcacaagcacctcagtgttcgtggacggacttttgagcgagccgggagatgag
acgttggtcatgacggtgttcggtcacatcagctatcggtcagactgggagctggtcaag
gtggacttcagacagtcattccccagacagtgtacagagggagactacgactcctggaaa
ctcacagatctgcagggagagaagtgcatcatgggtcaggagaggagtttcaggaagagg
aaggacactgcgttctgtatcaaggggaggagctacacctccgccctgactaccaagccc
tgccagtgttccgagaaagacttcaactgtgactatgggtttgaacgtgcccagagcctc
aaaaccgagggagatagatgcttcgctgacttctggcacgacccagactcaccgcctgac
aactgtcaccagggacacaactttgagtccagtactgggtacaggaaggttgtgtccaac
ttgtgtgaggggggagtgaacaagcagcagagcggcaagcagcacacctgtcctctactg
ccgcccagaggcctccagctaggcatcaaaggacagatgctggctgtggcgcctggtgat
gacatcaccttcatcgtccaccaggagcagggtgacaccagcagcactaagtaccaggtg
gatctgggggacgggatgagggccatctaccagaacctgacggtgacagacgaacccatc
cagcaccgctacaaacagcagggggtttaccgcatcaccgtcaaggccgagaacatggcc
ggacacgaccaggccaccatatatatccaggtcacagcccctctacaggaagttcaccta
gaagtagttcccatcgccgggattaaccaggaagtcaacctgacagctgtggtacttccc
tttgaggccaacctgactgtcttctactggtggataggagacaacctacagcccaagatg
tctctggggaacagtctgataacgaggttccctgaggaaggagaggtgtctgtcaccgtc
caggcctctaacggacgctccatggtgcagaacaccaagaacgttcacgtctacgaccgt
ttccaggtcatccccctggccttcagcagtaacctggaccgcctcaacccaaacattcca
gagtggagggaggacgtgggtcaggtggtcaccaagatattggcaaagatcacaggtatc
ccccaggtgtccctggtaaccatggtgaagcggggcctgcccaccacagctgacctgtac
gttctcccaccagagagccagcgtgctaagtggagcgtgtttgtggataagcgtatacct
gcgatcaagcaggccttcaacgacaacaacgttagcttcatcgtacgaggaggtctacag
gtgttggtgaagctagctgaccctaacgcaggttctcagggtggagtggcaggtcctgga
gtctgggctctggctgtcatcttcctcatcagcctcctcgctaccggatccttcatcctc
tacaagttcaagagtccttggcttaggacagaggatgcctatcctccgctgtttttcaga
aagctgcccggccggaacgtctacgcccagatgcacaatgagaaggagcaggagatgacc
agccctgtcaatcacagtgaggacacgcagcacatcatccagggggaggagtttatcgac
gacgacctggactcgcagactctaggtaacgcagaaggtaaccactcgggcgtggtgctg
agcatcaactccagagagctgcacagctacctgaccagctga
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