Salmo salar (Atlantic salmon): 106608594
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Entry
106608594 CDS
T04363
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106608594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106608594
Spliceosome [BR:
sasa03041
]
Complex A
Other components
Complex A specific factors
106608594
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
106608594
NCBI-ProteinID:
XP_014062100
UniProt:
A0A1S3SCN0
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Position
ssa07:10096426..10108910
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AA seq
680 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGLMPPPGPPVAFPSLPNFQPPIPNVSFPQAH
PVFTAVAAFPTPPQPPQGAGMQSQSDFGQKKARKRSRWNSETPDQKTVIPGMPTVIPPGL
TRDQEKAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNNQN
SSHNRGNNQPPPSRPPWMNSGQSENRNFHSMHGGHGGHGNQHGGHGNHGGHGGHGGHHNF
PPPMSNMGGHPMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMMPPPPPPPNNQPPPP
PSGPLPPWQQQAPPPPPTSSMATSAPLPWQQNTTTTSSPGTGNLPPWQQPQQSAASAAQP
PPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPMDPSNFVTMMGMG
VPGMPPFGMPPAPPPPPPQN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcgaatgcaacccctctagggaagctgcacccgagtatcggcgctaaa
cgaggctttgatgctgggcctggtgcggggttaatgcctccacccgggcctcctgtggcc
tttccttcactaccgaattttcagccaccaattccaaacgtgtctttcccgcaagctcac
ccggtgtttactgcggtggctgcttttcccaccccaccacaaccaccccaaggtgccgga
atgcagtctcagtcagactttggtcagaaaaaagccaggaaaaggagccgctggaatagt
gaaacacccgaccagaagacagtcattcctggtatgcccaccgtcatcccgccaggactg
actcgggatcaggagaaggcctatatagtccaactgcagattgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacagatccccgtctccagag
cccatctataacagcgagggcaagaggctgaacaccagggagtaccgcacgcgcaagaag
atcgaggaggagcgtcattccctcatcaccgatatggtggcactcaaccctgagttcaag
cccccggctgactacaagcccccagccaccagagtcaacgacaaggtgatgattccgcag
gacgagtacccagagatcaactttgttggcctgctgattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggcaagggctcggtaaag
gagggcaaggtgggccgtaaggacggccaaatgctgccaggggaggacgagccgctgcac
gccctggtcactgccaacaccatggagaacgtcaagaaggctgtggaacagatccgcacc
atcctcaagcagggcatcgagacccctgaggaccagaacgacttgaggaagatgcagctg
agagagctggccagactcaatggaaccctgagagaggacgacaacaggatcctgcgtccg
tggcagagcactgaaccccgcagcgtcaccaacacgaccctctgtaccaagtgtggcggt
gcaggccacatctcctcagactgcaagttcaccagctcctttgctgcgcccagggccggt
gagcccccccaatctgcccaggacaaggcccgtatggacaaggaatacctgtccctcatg
gcagagctgggcgaggcccctgtaccctcctctggtgggggacactccaacaaccagaac
agcagccacaacagaggcaacaaccagccaccaccgagccgtcctccctggatgaactcc
ggccaatctgagaacaggaacttccacagcatgcacggaggccacggtggtcatggcaac
caacacggtggtcatggtaaccacgggggtcatggaggtcacggaggccaccacaacttc
ccaccccccatgtccaacatgggaggacaccccatgccccccaacaacggcatgccaccc
ccgtggatgcagcccccaccgccccccatgggccagggacacggacaccatatgggtctg
ttgcctccacccatgatgccaccaccacctccacccccgaacaaccagcctccccctcca
ccctcgggtcccctgcctccatggcaacagcaggcccctccaccccctcccaccagcagc
atggccactagtgcaccactgccatggcaacagaataccaccacaacgtccagtcctggc
actggcaacctgcccccctggcagcagccccaacagtccgctgcctcggctgcccagccc
cctccccccatgggcaacccctccatggtcccccctccgcccggagtccagccccctctc
ccccctggcgccccacctccccctcctcccccaccccctggctcggccggcatgatgtac
gcccctcctccccctccgcccatggatccctccaactttgtcaccatgatggggatgggg
gtgccaggcatgccccccttcggtatgccccctgcgccgccacctccacccccccaaaat
taa
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