Salmo salar (Atlantic salmon): 106608613
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Entry
106608613 CDS
T04363
Name
(RefSeq) protein transport protein Sec24D-like
KO
K14007
protein transport protein SEC24
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106608613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106608613
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106608613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
106608613
NCBI-ProteinID:
XP_014062123
UniProt:
A0A1S3SCP9
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All DBs
Position
ssa07:complement(14704508..14734283)
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AA seq
1032 aa
AA seq
DB search
MSQQGYVATHPYSQAQPGMVGYPAGFGSSPAQPLYGHYGGQPQSFPAPPTGLMKPVSSPS
GMPPPEVSSQYGSNGQQNGAHPQRYPASPAAAASASPYGQPPNSPYHSMAPQAPAQQLTN
QMGSMNLGYGPGPMQSPQAPPTSPPAQQPFQTAPPPTMGHSTLGPPTGPHSPQMAPPQSP
LAGPSMGGHPPMGGMGRPFPGPPPPGAGGFQQPGPGAAGQPGYPQQPQGQFGGQMAGPGM
AGPFQGGAAHMSGPPQKKLDPDSIPSTTQVTEDDQAKRGGQVYTTNLRGQVPPLVTTDFT
VQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLGAIIKPFATVPKNETPLYVVNHGETGP
IRCNRCKAYMCPYMQFIDGGRRYQCGFCNCVNDVPVFYFQHLDHMGRRVDLYKRPELSLG
SYEFEATLDYCKNNKPASPPAYIFMIDVSYANIKSGLVRLICEELKTLLDNLPREDGAES
STVKVGFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNFQESRAVINNLL
DQIPDMFADTNESETVFAPVIQAGVEALKTAECSGKLFIFHSSIPTAEAPGKLKNRDDKK
LTHTEKEKTLFQPQKGVYEQLSQDCVSQGCSVDLFLFPSQYVDLATMGDVPTHTGGSIFK
YTNFQVEMDGQHFLSELRKDVKKAIGFDAIMRVRTSTGFRATNFFGAIHMNNTTDVEMAA
VDCDKAVTVEFKHDDKLSEETGALMQCALLYTTVSGQRRLRIHNLSLNCSAQLSELYKSC
ETDALINFFAKSAYRAMLNQPLKTVREILVNQTAHMLACYRKNCASPSAASQLILPDAMK
VFPVYLNSLMKTGPLVGSAELSTDDRAHQRLITMAMGVEDTQLLLYPRLVPLHNMDVASD
VVPAPVRCSEERLTDAGMFLLENGRSLFLWLGQACPPELVQRVFNVPSFAHVPADLSSLP
VLDNPQSKKLRSIIDSLLDQRPSAMKLLIVKQKDRSELLFRQHLVEDKGLHGGASYMDFL
CYVHCEIRQVLT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacgcatccatactcccaggcccagcctgggatggtg
ggctacccagctgggtttgggagttcgcctgcccagcccctctatggacactatggggga
caacctcagtcattcccagccccaccaacaggtttgatgaagcctgtgtcctccccctcc
ggcatgcctccaccagaggtctccagccagtatggctcaaacggtcagcagaatggagct
caccctcaaaggtaccctgcctctcctgctgctgctgcttccgcctctccgtatggacaa
ccccctaattccccctaccacagcatggccccccaggccccagcacagcagctcaccaat
cagatgggttccatgaacctcggatatggtccagggcccatgcagagccctcaggcaccc
cccacctctcccccagcccagcagccattccagaccgcccctcccccaaccatgggacac
tcaaccctgggcccacctacgggcccccattcacctcagatggctcccccacagtcgccc
ctagctggcccatctatgggagggcacccacccatgggaggcatgggtaggcccttccca
ggcccaccccctccaggcgctgggggcttccagcagcccgggcctggagcagccggacaa
ccaggataccctcagcaaccacaaggtcagtttggggggcagatggcgggacccgggatg
gcgggacccttccaaggcggggcagcccatatgtccgggccacctcagaaaaagctggac
cctgattccatccctagcacaacacaagtcacagaggatgaccaagccaaacgaggggga
caggtgtacaccacaaacctcaggggtcaggttcccccgctggtcactactgactttact
gtacaggaccaaggaaatgccagtcctaggttcatgcgttgcaccacctactctttcccc
tgcacggctgacctggccaagcagtgccaagttcctttgggtgccatcatcaaacctttc
gccacggtgccaaagaatgagactcctctctatgtcgtgaaccatggtgagaccggtccg
atccgctgtaaccgctgcaaagcctacatgtgtccctacatgcagttcatcgatggcggc
cgccgctaccagtgcggcttctgcaactgcgtcaatgacgtgccagtcttttatttccaa
cacctggaccacatgggcagaagggtggatttatataagaggccagagctgtcgctgggg
tcctatgagttcgaagccaccctggattactgcaagaacaacaagccagccagtcctccg
gcgtacatcttcatgatcgacgtgtcctatgccaacatcaagagcggactggtcagactg
atatgtgaggagctgaagaccttgctagacaacctgcccagagaggatggtgccgagagc
tcgacggtgaaggtgggcttcgtcacttacaacaagatcctacacttctacaacgtgaag
agtgccctggcccagcctcagatgatggtggtgtctgacacggccgagatgtttgtccca
ctgctcgacggcttcctcgtcaacttccaggagtctcgtgccgtcatcaacaatctcctg
gaccagatccctgatatgtttgcagacaccaacgagagcgagacggtctttgcccccgtc
atccaggctggggtagaggcactcaagacagcagaatgcagtggcaagctgttcatcttc
cactcatccatccccactgccgaggcccctgggaaactgaagaacagggacgacaagaag
ctgacccacacagagaaagagaagactctgttccagccccagaagggtgtgtacgagcag
ctctcccaggactgtgtgtctcagggttgcagcgtggatctcttcctcttccccagccag
tatgtggacctcgccaccatgggagacgtccccacacacacaggaggctccattttcaag
tacaccaacttccaggtggagatggatgggcagcatttcttgagtgaacttaggaaggat
gtgaagaaggccatcgggtttgacgccatcatgagagtccgcaccagcacaggcttcagg
gctacaaacttcttcggtgctatccacatgaacaacaccacagacgtggagatggctgcc
gtggactgtgacaaggctgtgactgtggagttcaaacacgatgacaaacttagcgaggag
acgggcgcactcatgcagtgtgccttgctgtacacgaccgtcagcggccagcgtcgtctg
cggatccacaacctcagtctgaactgcagcgcccaactgtctgagctatacaagagctgc
gagactgacgccctcatcaacttcttcgccaagtcagcgtaccgtgccatgctgaaccag
cccctgaagacggtgagggagatcctggtcaaccagacggcccacatgctagcctgctac
aggaaaaactgtgccagtccctccgctgccagccagctgattctgcctgatgccatgaag
gtgttcccagtctacttaaacagcctgatgaagactggtcccttggtaggcagcgctgag
ctctctacagacgacagggctcaccagagactcatcaccatggccatgggggtggaggat
acccagctgctgctctacccacgccttgtcccactgcacaatatggatgttgccagtgat
gtggtgccagctccagtgcgctgttctgaggagcgcctgacagatgctggcatgttcctg
ctggagaatgggcgctccctcttcctgtggctgggccaggcctgccccccagagctggtc
cagagagtcttcaatgtgccctccttcgcccacgtgcccgctgacctgagctccctgcca
gttctggataacccacagtctaagaagctgcgttccatcattgactcattgcttgaccag
aggcccagcgccatgaagcttctgatcgtgaagcagaaagaccggtctgagttgctgttc
cgccagcacctggtggaggacaaggggctccacggtggagcctcctacatggacttcctg
tgctacgtccactgcgagatcagacaagtcctcacttaa
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