Salmo salar (Atlantic salmon): 106608644
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Entry
106608644 CDS
T04363
Name
(RefSeq) DENN domain-containing protein 4C-like
KO
K20163
DENN domain-containing protein 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106608644
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106608644
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
CA109-like
PPR
Motif
Other DBs
NCBI-GeneID:
106608644
NCBI-ProteinID:
XP_014062195
UniProt:
A0A1S3SCX8
LinkDB
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Position
ssa07:12723309..12784921
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AA seq
1951 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSAQQANLNHGSLKSPEIFLCYKRGHDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGHCANVNNSSATSQRIFITLRRAPPVQPQNSLSVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSNVFLCYKKSVSVSNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WTPNTRYPLPVFSTFVLTNSSGEKVYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPMPLSGADYSTLLINLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHSNWKNLPKKPCKSLFNSLTNLQHQLGIVRRTAQEGSAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMAHILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLKSRERAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQRSEHTVFVMPPEPPTPEDESDPPTRYSYKSFPRLRIDLFD
RPREVIPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSDPPLWAKCLFSHCYS
LWFICLPVGVRLVQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGLYGQPVMAV
RVLVEMRKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVVRTVAQFKQALHR
MPATKGPTIITTVVSVSGLVSGDRMSHGSADHSSEVNGEDHTLFARSLIIGDATDNHCST
GGQSDQGYGSKDELHQEQVDLAQSAAPLIDVDHRSKPKAQHNGGDIAGSVDSSVVVAEPT
SPVEAILHVPSIVKLSTGGSFDTAMKRGGTAPGKLFSLRSQSQDVSLPEEGESAAPGGSG
EAGPAVQGQRQKAFSERSCSFSVESRAGMLMEKHGVDHIARRMGADARILAAALSGCGTT
QPPTNPPSKALFKELESEEGRGPMLGKLSEEEGPVMDPTPLEEGLGKEEKRMDGEDEMGL
KLEEEGDSGGRGDDSLPTLEMKEVEVGADPLSLLVSEHEELASVTSQELPHSLPAVVSRN
LADEIEMYMSLRSPLGPKSSSMEFHQGGQGGDSSPDTAPVKQALERRSSLPVPPVKHPGG
LSGDSTPKRSPAAVTRSKTFAVMATRSPASSGGVVASPRSSLTALVRSSQNGSLGSVINS
ISGMKMDTLLSGPKMDVLKSGMKQAGNLASKVWGAVASAYSYSDDEDELAPGYRDRDSFP
AGLDESMLSGGGGGDSPTHRGPTQGLVSNGLTQSSTSLASSSSSSDTGRGPHSTLTPGRP
GRGPDSDQGSHHTSSSSIYQNCALEVLMSSCSLCRSCECLVYDEEIMAGWTADDSNLNTT
CPFCRTAFLPLLHVEFHDLRTNTAFYLKPSASGDSIHSASHQPTTTDSTVLKVGGAADTP
RPDLISFPESSSEDPGEVPTSQTATHKSLVPVPEPAQSDPLGLLEHQAGKRGTSLTRSNS
VGGPLQSLVSAQRQPGHGVSTTSLPCSLTEVDGLGQKRPNPMPVSVPYLSPLVLRKELET
LLENEGDQVIYTHKFLSQHPIIFWNLVFYFCRLDLPSYLPGLILTSEHCNNGVQLPQTSL
SQDSKQVYVQLLWDNINLHQEPGHPLYQSWRTLLEKKATLAPTDHQETRTLLNSIVRSIQ
TNDVYGPINLLLREVKRHPEVKRQRGIYREILFLALVALGRENIDVEAFDREYRLAFDDL
SPEQLKALHKIDRPPNSNVQWCLKCFGAPVI
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgccactggagcaggacctgtcggagaccaagtccagcgggcccaaggcgccc
atcactgacctggctgtcatcaacaaatcggcgggcgagacggtgccggagggcttcacc
tgcatcgagagcacttacagcgcgcagcaggccaacctcaaccatggcagccttaagagc
cctgagatatttctctgctacaagaggggccacgacaagcccccgctcattgacatcggg
gtgttatatgaaggtaaggagcgtctcatccagggctgtgaggtaatccaggctacgccg
tatggccactgtgccaacgtcaacaacagctctgccacctcacagcgtatcttcatcacc
ttacgccgcgcgccgcctgtccagccccagaactccctgtccgtcaccgacatctgcgtc
atcgtcaccagcaagggcgagacgccgccgcacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggctctaatgttttcctgtgctacaagaaatcagtgtcggtgtcc
aactccattaattacaaagccggcctcatcttccgctacccagaggatgactatgagtcc
ttccccctgtcggagtctgtgcccctgttctgcctccccatgggggctaagatcgaatgc
tggacccccaacacacgctaccctctccctgtcttctccacctttgtgttaaccaactcc
tctggggaaaaggtgtacggcgcggccatccagttctatgaagcctaccccatagatctc
ctcagtgagaagcagaaggtgcagttgggcctgctcaccaccgtggagaagaagatgatc
cccaaccggacagtcaacaccaacaagtgcatctgcctcctttcccgctggcccttcttc
gagtcgttccgcaaattcctcatgttcctctacaagctgtccgtctcgggcccccacccg
ctgcctatcgaaaagcacatctcacatttcatgcacaacgtgtccttcccctcccctcag
aggcccagaatcttggtccagctctctgcacacgacaccttgatgctcgcacagcctgtg
tgtactcctatgcctctcagtggtgcagactacagtacactgctgattaacctgggctca
gagaactgtgccacgctgttgcacttcgtcctgctggagagtaagatcctgctgcactcc
ctgagacctgctgtactcaccggggtagcagaggctgtggtggcgatgatttttccattc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaacgca
ccctgtcccttcattgtgggtgtggactcccgctactttgacctctatgaccccccgccg
gacgtggtctgtgtggacctggacaccaatacgatctacctgtctgatgagaagaaacac
agcaactggaagaacctcccaaagaagccctgcaagagtctgtttaactccctgaccaac
ctgcaacaccagctgggcatcgtgcgtcggacggcccaggagggctcggcggtggagatg
acccccatcgaagcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggcccacatcctgaagggctaccgttcctacctcaaa
cccatcacccaggccccctccgagaaagccacctctgcagactcactatatgacctacag
ggtttcctaaagagcagggagcgagcccaccagaagttctattcgcagctgaccaagact
cagatcttcatccgcttcatcgaggagtgcacgttcgtcagcgacaaggacacaggcctt
gccttcttcgacgactgcatcgagaagctatttccctctgataaaggcaacgacaaaggc
actaaggtggagggtgagtcctcagaggacactaagctcatggaactagacgaatcacag
aggagcgagcatacagtcttcgtcatgcccccagaacctcccacccccgaggacgaatct
gatccccctacccgctacagttataagagtttccctcggttgcgtatagacctgtttgac
cgtcccagagaggtgataccagcgctgaggagcagtacaccaggggccagcctgtccagc
agccctgcactgctggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccgaccctccgctgtgggccaagtgtctgttcagccactgctacagt
ctgtggttcatctgtctgcctgtcggggtgaggctggtccagtccaagagctgggcaatg
cagcaggcctacaacgtcctgctcaagatgaggacctctgaggtggaggtcctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtttgtacggtcagccggtcatggccgtc
cgtgttctggtggagatgaggaaggcaggggtgcaccctaacgctatcacctatggctac
tacaacaaggctgttctggaaggtccctggccaagtcgaaaccgcagtggtctcttcatg
tgggccaaggttcgcaacgtggtgcgcactgtagcccaatttaaacaggcactccaccgg
atgcccgccacgaaaggacccaccatcatcacgacagtggtgtcagtgagcggcttggtg
agcggcgatcggatgagccacgggagtgcagatcactccagtgaggtgaacggagaggat
cacacgctgttcgcacgcagcctcatcataggagacgccacagacaaccactgcagcaca
ggaggtcagtctgatcagggctacggctctaaagatgagttgcatcaggagcaagtggat
ttggctcaatcagcagcccctcttatcgatgtggatcaccggagcaagcccaaagcacag
cacaatggtggggacatagctggctcggtggacagttctgtggtcgtagcggagcccacc
agccctgttgaagccatcctacatgtccccagcatcgtcaagctgtccacaggagggagc
ttcgataccgccatgaagagaggaggcactgccccagggaagctgttctctctgcgcagc
cagagccaggatgtctctctgccagaggagggtgagtccgcagccccgggtggctctggg
gaggcggggcctgcagttcagggccagcgccagaaggccttctcggagcgcagctgcagc
ttcagcgtcgagagtcgtgctggcatgctgatggagaaacatggcgtggaccacatcgcg
agacgcatgggcgccgatgcccgaatccttgccgctgccctttctgggtgtggcaccacc
caaccgcctacaaatccgccatccaaggctctttttaaggagttggagtcagaggagggg
cgtggtccgatgctggggaaactgtcagaggaggagggccctgtaatggacccaacccca
ctggaggaggggctagggaaagaggagaagagaatggacggggaggatgagatgggactg
aagttggaggaggaaggagattcaggggggaggggtgatgactctctgccaaccctggag
atgaaggaggtggaggtcggggctgatcccctctccctgctggtctcagagcacgaagag
ttggcgtccgtaaccagccaggagctgccgcactccctgcccgccgtggtgtcccgaaac
ctggcagacgagattgagatgtacatgagcctgcgaagcccactgggccccaagtcctcc
agtatggagttccaccaggggggccagggaggggactcttccccggacactgccccagtt
aagcaagctctagaacggaggtccagcctccctgtgccccctgtcaaacacccagggggt
ttaagcggggactcgacgcccaaacgcagccctgctgctgtcacgcgctccaagaccttc
gccgttatggccaccaggagccctgcctcttccggcggtgttgtggccagcccgaggtcg
tcactgacggcgctggtgaggtcctcgcaaaacggctcgctgggctcagtcatcaactcc
atctcaggcatgaagatggacaccttgctctctggtcccaagatggacgtgttgaagtca
ggcatgaagcaggcaggaaacctggccagcaaagtgtggggggccgtggcctcagcctat
tcctactccgatgacgaggatgagctggccccgggctacagggatagggatagtttccct
gccgggctggatgagtccatgctgtcagggggtggaggaggggacagtcccacccacaga
gggccaacccaaggcttggtgtccaacggactgacacagagcagcaccagcctggccagc
agcagtagcagcagtgacacagggagaggacctcactccacactgactccaggacggcca
gggagaggtccagactctgatcaaggctcccaccacaccagctcctcaagtatctaccaa
aactgtgccctagaggtgctgatgtccagctgctccctgtgtcggtcgtgtgagtgtctg
gtgtacgacgaggagatcatggcgggctggacggcagacgactccaacctcaacaccacc
tgtcctttctgccgcaccgccttcctgcctctgctccacgtcgagttccacgacctgcgc
accaacacagcgttctacctgaagcccagtgcatcaggagacagtatccacagcgccagc
caccagcccacaactacggactccaccgtgctcaaggtggggggtgcagcagacaccccg
cgcccggacctcatcagcttcccagaatcctcctctgaggacccaggggaggtcccgacc
agccaaaccgccactcacaagagtttggtaccggtaccggagccggctcagtcggaccct
ctgggcttgctggaacaccaggcagggaagcgggggacgtctctgacgcgcagtaacagc
gtgggcgggccactacagagcctggtctctgcccagagacaacccggacacggcgtgtcc
accaccagcctgccctgcagcctgacagaggtggatggcctgggacaaaagcggcccaac
cccatgccagtgtctgtaccctacctcagccccctggtcctccgcaaagaactggagacc
ctactagagaacgagggggaccaggtgatctacacccataaattcctgagtcagcacccc
atcatcttctggaacctggtgttttatttctgtcgcctggacctgcccagctacctgcct
ggcctcatcctcacctcggaacactgcaacaacggagtacagctcccccagacctccctg
tcccaggacagtaaacaggtgtatgtgcagctgctgtgggacaacattaacctgcaccag
gagcctggccatcccctctaccagagctggaggaccctgctggagaagaaggccaccttg
gcccccacagaccatcaggagacacggaccctcctcaacagcatcgtccgcagcatccag
acgaacgacgtatacggccccatcaatctgctcctccgagaggtcaagcggcacccagag
gtcaaacgccaaaggggtatctatagggagatcctcttcctggcacttgtggcattggga
cgggagaacattgacgtcgaggcctttgaccgtgaataccgcctggcctttgatgatctg
agcccagagcagctcaaggccctgcacaagattgaccggccacccaacagcaatgtccag
tggtgcctcaagtgctttggagctccagtcatctga
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