Salmo salar (Atlantic salmon): 106608787
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Entry
106608787 CDS
T04363
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa02010
ABC transporters
sasa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106608787
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106608787
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
106608787
Transporters [BR:
sasa02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106608787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
106608787
NCBI-ProteinID:
XP_014062403
UniProt:
A0A1S3SDJ9
LinkDB
All DBs
Position
ssa07:16695322..16976708
Genome browser
AA seq
2263 aa
AA seq
DB search
MGLLTQLGLLLWKNFTLRKRQKVRLVVELLWPLFLFLILVRVRSTNQPIYQGGCHYPNKA
MPSSGVLPWLQGMMCNIGNPCANHPTPGEAPGQVNNFNNSIIAGMLIELQSLLANRSILT
KFQRLSEDVNHWALIMQTSNPANGQPIPLRSILNDNEMFTAYLKKNLSMPLTVVNSLMNS
NIHRNEMMSISRQDDLRTTLCNGTTLDKYVEFTSVSDKEAFQNVSCSLPAQQMRRAKEVF
LQNLDTRKILTNLPLDVNPAETFGLVGRTTEDALHVIDEMNKLQNSMLFKSANTLDFKAD
AFGSLNMLLCGKAPDSNSTNTTMNFSASGLTRNDTENSELLDARNRSSSAFCKILIDNLE
GTPGLRVVWSTFRPLIQGKVLYTPDTPATRLMVKEANSTFNALAMIKELAQAWEDFRQLV
WDYFQNGRQVNALRAMLDNPVFVALLNQRLKGTRWTAELLSNFLYNGPPEGRPTGMPPND
WRNAFNTTSQILDLLKKFIGCLNLDKFEAADSERHLMTRALELLESNKYWAGIVFEDLNP
TASHPPPYVKYKIRMDIDKGERTNKIKERGWSPGARGNSFNDLRYIWGGFAYLQDMMDHG
IIRAHTNKSQPLGVFAQQMPYPCYVDDVFLRSLARSLPLYMTLAWIYSVAMIVKGIVMEK
EARLKETVRMMGLRSSTYWLSWAVSSMLPLAVSALLLTLILKYGKVLQYSDPSVIFVFML
VFCVATIMECFFISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVLGFQVKISVSLLS
CVAFGYGCENFAKYEEQGIGIQWSNIAQNPEGDRYSFIVSIIMMLIDALIYWLLTWYIEN
VFPGQYGIAKPWSFPFTASYWCGTSAVPNADPGQFKDPMEYNDYLEKPPPNMKAGVSIRN
LVKIYKTGKKLAVDGLSVDFYENHITSFLGHNGAGKTTTMSILTGLFAPTSGTAFINGYD
IRTDMDTIRKHLGMCPQHNVLFNDLTVEEHIYFYARLKGRSRDEVKTEMDQMIKDVGLPH
KRKELAKNLSGGMQRKLSVAIAFVGGSNIVILDEPTAGVDPYARRGIWELLLKYKKGRTI
ILSTHHMDEADILGDRIAIISHGKMCCYGSSLFLKKYFGSGYYLTLVKAGNEQITNERSG
VKQGQVKEGKHQETSPRTKETDETLRRTSLDEGIASQNWSNSDPTELTAVSKLVRRHVPE
AVFLESIGQEITYILPYSGAKDGTFALLFKELDLEMANIGLTNYGISDTTLEEIFLKVAE
DTGVDVEITDNKEPLVRDKTRSSRESKRQRQSLTNVGNTSDKVTGKSAEVKAKFTSRVED
VERVANVNGKGSSVIMGWELIRRQFLALFIKRFHHARRSRKGIIAQVILPAVFVCLSLIF
SVIIPPFAEYPNLELQPWMYGLPQTTFYSNDGPPDNTEVTQVVDSLVNNPGFGTRCMANN
PIPNLPCVPIDSKWITPSVEPSINNILINGTWSMANPSPNCQCSTPQKTIMLPDCPPGAG
GLPPPQRTQNTTDTLQNLTGRNMTDFLLKTYEKAGRKRYGGISVGGVNSQVRMTEPEIEA
VIRDLKSLFNSPQDNTTEQILLNTKTLLKELGTRDNVKVWFYNQAWHGIVSFLNVANNAI
LRGNLPTGRDPREYGISSSSHPLNLTKAQLSYQALAATSTDVVVSICVIFAMSFIPASFV
LFLIQERVNRAKHLQFVSGVNPAVYWVANFAWDICNYIVPCLIVIVIFLCFQQKAYVSPP
NLPALIWLLVMYGWSITPMMYPASFIFSVPSTAYVVLTCVNLFIGINGSLATFVMELFDD
DKISHINDIVKQVLLIFPHFCLGRGLIDMGKNQAMATLFERFGEDRFQDPLSWDMVGKNL
CAMAIQGAVMFTITLLIQYKFCCKPRLISGKSFSKEDEDVDVAQERARVHKGGAEKDLLR
ICDLSKVYSGKNIPAVDRVCLGVPAAECFGLLGINGAGKTTTFKMLTGDIAVSGGEAFLN
GYSIRTEMRDVHQNMGYCPQFDALNDLLTGREHLEFYARLRGVPEKDVTMVAEWGIQKLG
LVKYSNKSAGTYSGGNKRKLSTAIALIGCPPVVFLDEPTTGMDPKARRFLWDCILSIIKE
ERSVILTSHSMEECEALCTRMAIMVNGQFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALG
LVEEFVHETFPGSVLKEKHHNTLQYQLPLSKGALVSIFSQFTTHQQRLGVEDYSVSQTTL
DQVFVNFARYQHEEDNHATYDNKVDVSDEMPMKTQNPPVPESA
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacaacttggtctgctcctgtggaagaacttcactcttcggaagaga
caaaaggtgcgtctggtggtggagttgttgtggcctctcttcctgttcttaatcctcgtc
agggtgagatcaaccaatcaacccatttatcagggcggatgtcattatccaaataaagcc
atgccgtcctccggggtgctgccttggcttcaaggcatgatgtgtaacataggcaaccct
tgtgcaaaccatcccacgccaggagaagcaccaggacaagtcaacaacttcaataattcc
ataattgctgggatgttgatcgagctgcagtcacttctggcaaacagatccatcctaacc
aaattccagaggctttcagaggatgtgaaccattgggctttgattatgcagacatctaac
cctgcaaacggtcagcccattcctctgagaagtatcctaaatgacaatgaaatgttcacc
gcatatctgaagaagaacttgtccatgccattgacagtagtcaacagtctgatgaactca
aatattcatcggaatgagatgatgagcatttcaaggcaagacgacctgagaactaccctc
tgcaatggaacaactcttgataaatatgtggaattcaccagcgtgtctgacaaggaggcc
tttcagaatgtcagctgctccctcccagcacaacagatgagacgagccaaggaagttttc
ctacaaaacctggatacaaggaagatactcaccaacctacctttggatgtgaatccggca
gagacatttggattagtggggagaactacagaagatgcattacatgtgattgatgagatg
aacaagttgcagaactcaatgttgttcaagtccgctaacacgttggatttcaaagcggat
gcgtttggtagtctgaacatgctactatgtggcaaagctccagactccaactccacaaat
accaccatgaatttctctgcttctggactgacgaggaatgacacagaaaacagtgaatta
ctggatgccaggaaccgcagttccagtgccttctgcaaaatattgattgataatcttgag
ggaactcctggcctacgtgttgtctggagtacgtttcggcccctaatccaagggaaggtc
ctctacacccctgacacacctgccactcgactaatggtgaaagaggcaaatagcacattc
aatgcgttggccatgataaaagagctggcgcaagcttgggaggatttcagacaacttgtt
tgggactactttcaaaatggccgccaagtcaatgccctgcgggcaatgctggataaccct
gtgtttgtagccttgctcaaccaacggctcaaaggcacaagatggacggcagaactgctc
tccaacttcctgtacaatgggccccccgagggtcgccccacgggcatgccgccaaatgac
tggcgcaacgcgttcaacaccacaagccaaatcctggacctcctgaagaagttcattggg
tgcttgaacctggataagtttgaggctgccgacagtgagagacatctcatgactagagcc
ttggagcttctagagagcaataagtactgggctggtatcgttttcgaagacctcaaccct
accgccagccacccccctccttacgtcaagtacaagatccgcatggacattgataagggg
gagcgtacgaataagatcaaagaaaggggatggtcgcctggggcccgtggcaactccttt
aatgacctgcgctatatatggggaggcttcgcctatctgcaggacatgatggaccatggc
ataatacgggcgcacacaaacaaatcccagccgctcggcgtgtttgcccagcaaatgcca
tatccctgctacgtggacgatgtgttcctccgctcgctggcacgctctctgcccctatac
atgaccctggcctggatctactcggtggcaatgatcgtgaagggcatcgttatggagaag
gaggcgcgtctgaaagagacagtgaggatgatggggctgaggagctcaacctactggctg
agctgggccgtgtccagcatgctgccgctggctgtcagtgcgctcctcctcaccctcatc
ctcaagtatgggaaggtgctgcagtacagcgacccctctgtgatcttcgttttcatgctg
gtcttctgcgtggccaccatcatggagtgtttcttcatcagcgtcttcttctcaaaggcc
aacctggcggcggcgtgcggtggcctcatctacttcgtactctaccttccgcacctcctc
tgctatgcctggagggacgtcttggggttccaggtcaaaatctctgtgagtttgctgtcg
tgtgtggccttcgggtatggctgtgagaacttcgccaagtacgaggagcagggcatcggt
atccagtggagtaacattgcccaaaatcctgagggagatcggtacagtttcatcgtgtcc
atcatcatgatgctcatcgacgctctcatctactggctgctcacgtggtacatcgagaac
gtcttcccaggccaatatggaatagccaagccgtggtccttccctttcacggcctcctat
tggtgcgggacgtctgcggtgcccaacgctgaccctggtcagttcaaggatcccatggaa
tataatgattatttggaaaagccaccacccaatatgaaggcaggggtctcaatcaggaac
cttgtaaagatctacaaaacgggaaaaaagcttgctgtggatggacttagtgtggacttc
tatgagaatcacatcacctctttccttggtcacaatggcgcaggaaaaacaaccactatg
tcgatcttgacgggactcttcgctccaacatcggggaccgctttcataaatggttacgat
atccgcacggacatggacaccattaggaagcatctgggaatgtgccctcagcacaacgtc
ttgttcaatgaccttacagtagaggagcacatctacttctacgccagattaaagggtcga
agccgtgatgaagtgaaaacggagatggaccaaatgatcaaggatgtagggctgccgcac
aaacgcaaggaacttgccaagaacctgtcagggggaatgcaaaggaaactgtcggtggcc
atcgcattcgtgggaggatccaacatcgtcatcctggatgaacccacagcaggggtggac
ccctacgcccggagagggatatgggaacttctgttgaagtacaaaaaaggtcgcacaatc
atcctctccactcatcacatggatgaggcggacatcttgggagaccgcattgccattatc
tctcacggcaagatgtgttgttacggctcctccctgttcctgaaaaaatactttggcagt
ggctactacctcactctggtcaaggccggaaatgagcaaattaccaacgagcgcagcgga
gtcaagcagggccaggtgaaagaggggaaacatcaggaaacatcaccccggaccaaggag
actgatgagaccttgaggagaaccagtctggatgaagggattgcgagccagaactggagc
aactctgaccccacagagcttacagctgtcagtaagctggtgcgtcggcatgttcccgag
gcagtgttcctggagagcatcggccaggagatcacctacatcctgccctacagcggggcc
aaggatggcaccttcgccctccttttcaaagagctggacctggagatggccaacattggc
ttgaccaactacggcatctcggataccacactagaggagattttcctcaaagtggcggag
gacacaggtgtggatgtggaaattacagataacaaagaacctttggtaagagacaagaca
agaagttcaagggaatccaagcggcaacggcaaagcctgaccaatgtcgggaacacttca
gacaaagtgactgggaaaagtgctgaagtgaaagccaagttcacaagcagagtggaggat
gtggagagagtggccaatgtgaatgggaagggctccagtgtgataatgggatgggaacta
atccgaagacaattcctggccctcttcatcaaacgtttccaccacgcacgcaggagccgc
aaaggcatcattgctcaggtgattctgccagctgtcttcgtctgcctgtctctcatcttt
tctgtcatcatccccccttttgctgagtatcctaatctggagctgcagccatggatgtac
gggctgccccaaacgacattctacagcaatgatggaccgccagataatacagaggttact
caagtggtggactctttggtgaataatcctgggtttgggactcgctgcatggctaacaac
cctataccgaatctcccgtgtgtccccattgattctaaatggatcactccctcagtggaa
ccctctatcaacaacatcttaatcaacgggacctggagcatggccaacccttcccctaac
tgccagtgcagcactcctcaaaagactatcatgctgccagattgcccacctggagctggg
gggctgcctccccctcagaggacccagaatactacggacacactgcagaacctgacaggg
aggaacatgacagacttcctcttgaagacatatgagaaagcaggcagaaaaaggtacgga
gggatttccgttggaggagttaactcccaagtcaggatgactgaaccggaaattgaagct
gtaatcagggatttgaaaagcctattcaattccccccaggataacacgactgagcagatc
cttctgaacaccaagacgctcctgaaagagcttgggaccagggataacgtcaaggtgtgg
ttctacaaccaggcgtggcacgggatcgtttcgttcctcaacgtggccaacaatgccatc
ctgaggggtaacctgcctacgggccgtgaccccagggagtacggcatctcctcctccagc
caccctctcaatctcaccaaggcgcagctctcctaccaggcactggctgccacctccacc
gatgtggtggtgtccatctgtgtcatcttcgccatgtcctttatcccagcgagcttcgtc
ctcttcctcatccaggagcgcgtcaacagagccaagcacttgcagtttgtcagcggcgtc
aacccggccgtctattgggtcgccaacttcgcctgggatatatgtaactacatagtcccg
tgtctaatagtcatcgtcatcttcctgtgcttccaacaaaaagcctatgtgtcccctcca
aacctaccagctttgatttggctacttgtaatgtatgggtggtctatcacacccatgatg
tacccagcctcgtttatcttcagtgtccccagcacggcctacgtggtgctgacctgcgtc
aacctcttcatcggtatcaatggcagcttggccaccttcgtcatggagctgttcgatgat
gataaaatctcgcacatcaatgacattgtgaagcaggtgctgctcattttcccgcacttc
tgtctgggtcgagggctcatcgacatgggcaagaaccaggccatggccactttgtttgaa
cgctttggggaagaccgtttccaggatcccctcagctgggacatggtggggaagaacctg
tgtgccatggccatccagggggcagtcatgttcaccatcactctccttatccagtataaa
ttctgctgcaaacccagactgatttctggaaagtcattctctaaggaggacgaagatgta
gacgtggctcaggaacgtgcacgcgtccataaaggcggcgcagagaaggacctgttgaga
atctgcgatctctctaaggtgtactcagggaagaacattcctgctgtggacagggtgtgt
ttgggcgttccagccgcagagtgctttggactgctagggattaacggggcaggaaaaaca
accaccttcaagatgctgacgggggacatcgccgtctccggaggagaggccttcctaaat
ggatacagcatacggacagagatgagggacgttcaccagaacatgggctattgcccgcag
tttgacgccctcaacgaccttctcaccggacgagagcatctggagttctacgccagacta
cgaggcgtaccggagaaggatgtcaccatggtggcagagtggggcatccagaagcttggc
ctggtcaaatattccaacaagtcagccggtacctacagcggagggaacaaacgcaagctc
tctactgccattgctctgattggttgtcctcctgtggtcttcctggacgagccaacgaca
gggatggaccccaaagccagacgcttcctgtgggactgtatcctgagtatcatcaaagag
gaacgttcggtcatcctaacatcacacagcatggaggagtgtgaggccctgtgcacacgt
atggccatcatggtgaatggacagttcaagtgtctgggcagcatccagcatctcaagagc
aggttcggggacggctacactgtgatcgtgagggtgggcggctcgccccccgctctgggc
ctcgtggaggagtttgtccacgagaccttcccgggtagcgtactgaaggagaagcaccac
aacactctgcagtaccagctccccctcagcaagggcgctctggtcagcatcttcagccag
ttcaccactcatcagcagaggctgggcgtggaggactactctgtctcccagaccactttg
gatcaggtctttgtcaactttgccaggtaccaacatgaggaggacaaccatgctacttat
gacaacaaagtggacgtgtccgacgaaatgccaatgaaaactcagaacccacctgtccca
gagagcgcctga
DBGET
integrated database retrieval system
