Salmo salar (Atlantic salmon): 106608788
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Entry
106608788 CDS
T04363
Name
(RefSeq) multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106608788
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
L27_1
Shufflon_N
DUF6288
Motif
Other DBs
NCBI-GeneID:
106608788
NCBI-ProteinID:
XP_014062407
UniProt:
A0A1S3SDI8
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Position
ssa07:complement(16169816..16233615)
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AA seq
2093 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQLLKD
QGGVTTFGGDLSECYTTAHANGSHLAYPESSTGTQINGKPSPEEFEHIIRSMAQGRYVTH
MELVKPLSGGLGFSVVGLRSENRGELGIFVQEIQPGSVAHCDGNLKETDQILAINGQPLD
QTVTHQQAIGILQRASERVQLTVARGPIPQLASPVVSRTPSAASTMSAHSSAAHWNHVET
IELVNDGTGLGFGIVGGKNTGVIVKTILPGGIADQDGRLHSGDHILTIGDTDLYGMGSEQ
VAQVLRQCGNRVKLVITRGPPEETSTVPMALPTVTEQQDYEEEEAESFDVGLTKNAQGLG
ITIAGYVGDKNSEPSGIFVKSITKDSAVEQDGRIHVGDQIIAVDGMNIQGYTNQQAVEVL
RHTGQTVHLKLVRSGFRPEDIPPAVVPSVIVLPPTPGGQDPTLERTDVVDTTAQGEKQYQ
ALSGESDVSTVKDQLTKNTRDEAKLTEDEELELMEKWQETLGPSNKVVIAQVEKFSESSG
LGISLEANNGHHYIRSVLPEGPVGRCGKLISGDELLEVNGISLIGETHKEVVRILKELPV
CVYMACSRSAPLLQSDRDSGQTGLDEFSTEPKIKIQGDLSSFLVPGGSEGAATRENVTEE
SLGAPLAMWETEIQDIELEKGESGLGFSILDYQDPMDPAKTVIVIRSLVPEGVAERDGRL
LPGDRLMFVNSTNLDNASLEEAVQALKGANIGMVHIGVAKPLPPYNEEDSPSSSSGISFF
LSSTLLVKESDEEEPAEDHLFRAEPALIDSNEGDLTDERALEHRFSGDEDDTLQASMIAL
HGSTCSADMDYQTTLQSSTPKRSARLDLLTEHPLVMLFGLADDTEPFSPEEKPIVFPLPR
SIGGHALTIDDNALTSSDQYLAHHLTQMEPSDLSNSYSPYTDPEPGLNDLGEPVQSLHFQ
MESAMAVEDIGEMEGLMKGDEPSVKQSKEEGDEVITTGSHFERTITVVKGNSSLGMTVSS
IKDGLGMYIRSIIHGGSISRDGRLGVGDLILVINGESMANLTNTQARAMLRRHSLIGPDL
GSACAPEDDLCPFYVITYVPVEYLEEYKTSLEQPKDDVCSDAPPAPKRGIPELPEREDGE
GEESELQTATFSNWNQPMKVELKREAGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHIME
DSPAGRNGTLKTGDRIVEVDGVDLSDASHEQAVEAIRRAGNPVVFLVQSIVHRPRPKSRY
SPTSSPVIEYSTALKRLPHHMCQSSTTDTNEERVARSNSDKPPKREAGKTSSTTPHLSLP
VVPHVGETDTDTLTEIPDRPSQTEEEDTFDYRWKNISQRYGSLPGLLHMIELEKGKTGLG
LSLAGNRDRSRMSVFVVGIDPSGAAGKDGRVVVGDELLEINGQILYGRSHQNASSIIKSA
PSKVKIIFIRNTDALNQMAVGPVREHGDTLEPQTELETCSSIAPSAIDVDMVKYVQHVIL
LKEEGGFGITFNEDTKDGVVIQSITERGPAGKDGSIKSGDKLLAVEDKPVMGYTVDRVHS
LLKKAKSSVKLTISTDKSSPLLPHCTGQATSLPSIPRISMATLGQSESEPIRSSSRSSTP
GTLASSDPVTCPIIPGCETTIDISKGRTGLGLSIVGGCDTLLSSFLSLLFLQGTIIIHEV
YEDGAASKDGRLWAGDQILEVNGIDLRVATHDEAINVLRQTPQRVRLSVYRDEAQYKEED
LWDAFTVELNKKPGQGLGLSIVGRRNDTGVFVSDIVKGGVVESDGRLMQGDQILSVNKED
VRNATQELVAELLKCGVGPIVMEVGRFKAGPFHSERRFSQSSQMSETGSCKVTPHSLSAS
SGSLQVDCDSLQHTNQESLDHQEIRSVEFTKGPTDSLGISIAGGVGSPLGDVPIFIAMMN
PTSLVVQTHKLKIGDIIVSICGTATEGMSHSQAVTLLKNATGTVGLQVVAGSDTTVTGPF
HEQTATGLSVSGLTATSIFHDDLGPPQYKTITLDRGPDGLGFSIVGGFGSPHGDLPIYVK
TVFGKGAASEDGHLKRGDQIMAVNEQSLEGVTHEDAVGILKRTKGTITLTVLS
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacaatggatacccagcgtgccttgcaggcagtggagcgtctccaggccaag
ctgaaggagcggggggaggtccccaccgaggagaagctaagcctgctcaagtcggtgctc
cagagccccctgttccaccagattctggccctgcagaagtctgtccagctcctcaaagac
cagggtggtgtcacaacatttggtggtgacctgagtgaatgctacacaacagcccatgcc
aatggcagccatcttgcctacccagaatcctccactggtacacagatcaatgggaagccg
tctcctgaggagtttgagcacatcattcgctccatggctcaggggcgctacgtgacacac
atggagctggtgaagccgctgtctgggggcctaggcttcagcgtggttggtctgaggagt
gagaaccgcggggagctgggcatcttcgtccaggagatccagcccgggagcgtggcccac
tgcgatgggaatctgaaggagacagaccagatcttggccataaacggtcagcccctggac
cagaccgtgacccaccagcaggccataggcatcctgcagagagcctctgagcgtgtgcag
cttaccgtggccagaggacccatccctcagctggccagccccgtggtgtctcgcacaccc
tccgctgccagcaccatgtctgcccactccagcgcggcccactggaatcatgtggagacc
attgagctggtcaacgacgggacaggcctgggctttggcattgtgggaggaaagaacacc
ggtgtcattgtcaaaaccatcctgcctggaggcattgctgatcaggatgggcgtctgcac
agtggggaccacatcctcacgattggggacactgacctttatggcatgggcagtgagcag
gtggctcaggtcctgaggcagtgtggtaacagagtgaagctggtcatcaccagaggccct
ccagaggagacctccaccgtcccaatggcgttgcccactgtcacagagcaacaggactat
gaggaagaggaggctgaatcgttcgacgtcgggcttaccaagaacgcccaaggtctggga
atcactatcgccggctatgtgggagacaaaaattccgagccctctggtatttttgtgaaa
agtataactaaagacagtgcagtagagcaagatggccgcatccatgttggggaccagatc
atagcagtggacgggatgaatatccagggctacaccaaccagcaggccgtggaggtgctg
agacacacgggccagacggttcacctgaagctggtcagaagtggcttccgtccagaggac
atcccacccgctgtggtgcccagtgtgatcgtacttccaccaaccccagggggccaagac
cccacactggagagaacagatgttgtggacaccaccgctcaaggtgagaaacagtaccag
gcattgagtggggaatcggatgtctccactgtgaaggatcagttaactaagaacaccaga
gacgaagcaaagctaacagaggatgaagagttggagctgatggagaagtggcaggagacg
ctcggccccagcaacaaagtagtgattgcccaggtggagaagttcagtgagagcagtggt
ctgggcatcagtctggaggccaacaacgggcaccactacatccgctctgtcctgcccgag
gggccagtgggccgctgtgggaaactcatcagtggggatgaactgctcgaggtcaatgga
atatccctgattggtgagacccacaaggaagtggtgaggattctgaaggagcttcctgtc
tgtgtctacatggcctgctctaggtccgcccctctccttcagagtgacagggattctggc
caaacagggttggatgaattttccaccgaacctaaaattaagatacagggagacctcagc
agtttcctggtacccggaggttccgagggggcggcaacaagggaaaatgtgacggaggag
agtctgggagctcctttggccatgtgggagacggaaatacaggacatcgagctggagaag
ggagagagtggactgggattcagcatcttggactaccaggacccaatggatccggcgaag
acggtgatcgtgattcgctctctggtgccagaaggagtggccgaacgggatggcaggctt
ttgccaggcgaccggctcatgttcgtcaacagcaccaatctggacaacgccagtctggag
gaagccgtccaggcactgaagggggccaacatcggcatggttcacattggggtggccaag
ccactgcctccatacaatgaagaggacagtccgtcgtcatcctctggaatcagttttttt
ttatcttcaacactgctggttaaagaaagcgatgaggaggagccagcggaggaccacctt
ttccgggcagagcctgcattgattgactccaatgagggagacctgaccgatgagagggca
ttggagcatcgcttctctggcgatgaggatgacactttacaggcttccatgatcgccctc
cacggcagcacctgcagcgccgatatggactaccagaccaccttgcagtcctccacaccc
aaacggagtgctcgcctggacttgttgactgagcatcccttggtgatgttgttcggcctc
gcggacgacactgaacccttctccccggaggagaagcccatcgttttccccctgcccagg
agtattggaggtcatgccctaacgattgacgacaacgcactaactagctccgatcagtac
ctagcgcatcacttaacccaaatggagccgtcggatctgtcaaactcgtacagtccgtac
actgaccctgagcccggtttgaatgatttgggggagccggtgcagtctctccattttcag
atggagtccgccatggccgttgaggacataggggagatggaaggcttaatgaagggggat
gagccatctgtaaagcagtccaaagaggaaggggatgaggttataaccactgggagccat
tttgaaaggacaatcactgttgtcaagggcaactccagtctcgggatgacagtgagctcc
atcaaggatggcttggggatgtacatccgcagcatcatccacgggggttccatcagccga
gacggccgtctgggagtgggggacctaatcctagtcatcaacggcgagtccatggccaac
ctgactaacacccaggcccgcgccatgctccggagacactccctcatcgggccagacttg
ggatctgcttgtgccccagaggacgatctgtgccccttttatgtcattacctatgtccct
gtggagtatctggaggagtacaagactagcctggagcagcctaaagatgacgtctgctct
gatgcacctccggccccaaagagaggaatcccagaacttcctgagcgggaggatggagag
ggagaggagagcgagctacagaccgccaccttcagtaactggaaccagcctatgaaggtg
gagctcaaaagagaagcgggcaagtcccttggcatcagcattgtggggggcagagggatg
ggcagtcgccttagcaacggcgaggtgatgcggggcatcttcatcaaacatatcatggag
gacagccccgccggccgcaatggaaccctgaagactggagataggattgttgaggtggac
ggtgtggacctgagtgatgccagtcacgagcaggctgtggaggccatccgcagggcagga
aaccctgtagtgttcctggtccagagtatcgtccacaggcccaggcccaagtcccgctat
agccccacttcatcaccagtcatagagtacagcaccgctttaaaacgcttgcctcatcac
atgtgccagtcctcaaccacggacaccaatgaggagagagtggcgcggagcaatagtgac
aagccgccaaagcgggaagcgggaaagacatcgtccaccacccctcacctctctcttcct
gtggttccccacgttggagagacagacacggatactctgacagagattcccgacagaccg
tcccagacggaagaggaggatacgtttgactacagatggaagaacatcagtcagaggtac
ggcagcctcccagggcttctgcacatgattgagctggagaaggggaagaccggcctgggc
cttagcctggctggcaaccgtgaccgctcccgcatgagcgtgtttgtggtcgggatcgac
cccagtggagccgccggcaaagatggtcgcgttgtggtcggggatgaactgttggagatc
aacgggcagattctgtatgggcggagtcaccagaatgcctcctccatcattaaaagcgcc
ccatcgaaggtcaagatcattttcatcaggaacacagatgctctcaaccagatggctgtg
ggaccagtgagggagcatggagacacactggagccccagacagagctggaaacatgttct
tccattgcaccctcggcgatcgatgtcgacatggtcaaatatgtgcagcacgtcattctg
ctgaaggaggagggtggattcggcatcactttcaatgaggacaccaaggatggggttgtg
attcagagtataactgaaagaggaccagcaggaaaggacggcagcatcaaatctggagat
aaactcctagctgtggaggataagccagtgatgggctacactgtggacagggtccactct
ttactgaagaaggccaaaagctcagtgaaattgactatcagcacagacaagtcatcgccc
cttctcccccactgtactggtcaggcaaccagcctacccagcatccctagaatctccatg
gctaccctgggccagtctgagtcagagccaatcaggagctctagtcgctcgtccacccct
ggcactctggcttcctctgaccctgtgacctgtcccatcatccccggctgtgagaccacc
atagacatctccaagggccgcacaggcctgggcctcagcatcgtggggggctgtgacact
cttctgtcttcttttctttcgcttctctttctccaggggaccatcatcattcacgaggtc
tatgaggacggagctgcctccaaggatgggagactttgggctggggaccagatcctggag
gtgaatggcattgacctgcgcgtcgccactcatgacgaagctatcaacgtgctgcgccag
acccctcagcgggtgcgtctcagcgtttacagggacgaggctcagtacaaggaggaggac
ctgtgggatgccttcaccgtggagctgaacaagaagcccggccagggcctgggcctcagc
atcgtggggagaaggaatgacacaggggtgtttgtgtcagacatcgtgaaagggggcgtg
gtggagagtgacgggaggctgatgcagggagaccagatcctgtccgtcaacaaggaggac
gtcagaaatgccacccaggagttagtggccgagctgctgaagtgtggtgtgggacccata
gtgatggaggtgggcagatttaaagctgggcccttccactctgagaggaggttctcacag
agcagtcagatgagtgaaacaggcagctgcaaggtgacccctcactctctgtcagcctcc
tctggaagcctccaagtggactgtgacagcttacaacacacaaatcaggagtcactggac
caccaggagatcagaagtgttgaattcacaaagggccccactgattccttgggcatcagt
attgcgggtggagtgggcagtcccctgggtgatgtgcccatcttcatcgccatgatgaac
cctactagcctcgttgtccagacacacaaactcaagatcggtgacattatcgtcagtatc
tgtgggaccgctactgagggtatgagccacagccaggccgtcaccctgctgaagaatgcc
accggcaccgtcgggcttcaggtggtagcagggagtgataccacagtgaccggccccttt
catgagcagacagctaccggactctcagtctcaggtcttactgctactagcatcttccac
gacgacctgggacctcctcaatataagaccatcacactggacagaggcccagacggactg
ggcttcagcattgttggtggcttcggaagcccacacggagacctgcccatttatgtgaaa
accgtgttcggaaagggggcggcgtcagaggacgggcatctgaagcggggggatcagatt
atggctgttaacgaacagagtctggagggggtcacccacgaggatgccgtgggcatcctg
aagaggaccaaaggaacaatcaccctgactgtactttcctag
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integrated database retrieval system
