Salmo salar (Atlantic salmon): 106608808
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Entry
106608808 CDS
T04363
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106608808 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106608808 (poln)
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106608808 (poln)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
106608808 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
TetR_C_6
Motif
Other DBs
NCBI-GeneID:
106608808
NCBI-ProteinID:
XP_014062441
UniProt:
A0A1S3SDM3
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All DBs
Position
ssa07:21051431..21146072
Genome browser
AA seq
1617 aa
AA seq
DB search
MERYSSSSNRLYSGPLSASGQKILAALRAQSHNCYSDTARAQRYRQYERYDSRQRGYQSE
ASWSRGTQEERRGREADRPWSRPQSYSQSSSPWDPSSQRDYSQTPALSQDSASSSIHRVR
YPLALHTPSNEPHWRDAPEEREPTFSLHFTLEDQGPSRPPLPRAEHPRPHREKPTGACGP
PFSRANVSVAPKNHVKNLETQSEGWLLGSGDGEWQCPERSQEETSIAPEDQRERLAKAKP
IEVALASGGDADRRAPVPVTKWQFGSIVLPPPQRAYKAEEKADCDKKRPARGLLHPASES
EDFTMKDMNSAPTFELRMEDDIGESCALEKDSFGASHTVERDGFGTSHALERDGFGASQG
LETDDFGASHTVERDGFGASHALERDGFGASQGLETDDFGASHTVERDGFGASHALEMDG
FGASHALERDGFGASQGLETDDFGASHTVERDGFGASHALEMDGFGASQGLETDDFGASH
TVERDGFGASHALQRDGVGEKLLFNEGDVTEGHRDSTESQCVIGLVDQQGALHGDTAQSK
GEIVTGGGPRENLSERDPIKRKRLFGDMTTDNQRGIGGGEMEGRVERERKDDINKGGMKK
KIERKNSRSSTKPHQQRKVSPSLGKMRDGEGQGVTERDSHPEERKNMDGPLMTVAQRNSG
GSTEPLAAGHFIPKSSQESGRVFRAPPLRATRLGQTPLATNHHNNTQAGDGGSRERGLSI
DPALTNPSHAGHGRAAGLGSGLTSIRASGEEESSGPHPLPSAQQPPLTPTFSLNSKQGAP
LPKIALFRRPVKWEPPQSCQEKARTLQGGQEWCKTQTPKHPDLTPAFSLDPRAKTKTLHK
TEGTKSVALTPNPSHRPPANPVRPRQGVPMGERGLESTRDHSNSVTPQHRSSKTPKPPKP
KWDKTGPNQGQLIPETEPESGSGAGDPQAQSNQSKTCLTTAMISDPRVTDAGKLSPEERG
RVLEEAGQASALVLTMVYQDGTTQMDPEQKLSPSVCGVLVMLKRDLDPTGPIPGPEEGVA
QRDSLVYLRLEQKPAWAQSHQDHNLDLFNREMLLQVVSGSQLVVCYKAKDLVRTALQHYR
PDLHWKQFSSCRVQDPQVAAWLLDPADPSSCFTNLLTKHCRTPPRTPTPALGARKVSQVI
SSLSLLYRLNMELRSKLQSQGLWELYSNMELTMIPVLAAMESHRIHVDTESLKTTSEMLG
TKMKQLEHEAHQAAGQMFLVSSSTQLRTVLFEKLRLQDRCENKKLPKTLNKQQQSTSEAV
LLQLQDLHPLPKIILEYRQVHKIKSTFVDGILSCVMSKNSISSTWYQTSAVTGRISAKHP
NFQALPRQPVQITKKQYVQGKEAEVVTVHPRAMFIPQDGYTFLAADFCQVELRLLAHLSS
DPELQRIFNNPQADVFTMLASQWKGVSEGEVSSEDREHAKRIVYSVVYGAGRERLSGILG
VSAEQARHFQDSFLHTYREVQTFIHTTIQQCHKQGYVVSIMGRRRTLPHIHSTDWGVRMQ
AERQAVNFVVQGSAADLCKMAMIRIFSQVSSSSSLSARLIAQLHDELLYEVEDSQVEEFA
VLVKNTMESLQHIDCLGVHLKVPLKVAVSSGKSWGSMSELHLPQTSLPPLPEGGPAG
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtacagtagcagcagtaataggctgtactcagggcctctgtctgcgtctgga
cagaagatcctagcagctctccgagcccagagccacaactgctactctgacacagccagg
gcccaacgctacagacagtatgagcggtatgacagcagacagagagggtaccagtcagag
gccagctggagcagaggaacacaggaggagaggagagggagagaggcagaccggccttgg
tccagaccccagtcctactcccagtcttcctccccatgggacccttcatcccagagggac
tactctcagaccccagccctgtcccaggactctgcctcctcttctatccacagagtgagg
taccctctggccctccacacaccctcaaacgagcctcactggagagacgctcctgaagag
agggagcccaccttctcactccacttcaccttggaggaccagggcccttccagaccaccc
ttgcccagagcagagcaccctaggccccatagagagaagccaactggggcctgtggacca
ccattctccagagctaacgttagcgtagctccaaagaaccacgtaaaaaacctagaaact
caaagtgaaggctggctcttaggcagtggagatggggaatggcaatgccctgaacgcagc
caagaggaaacctccatagccccagaggaccaaagagagaggctggctaaagccaagccc
attgaagtggccttagctagtggaggagatgctgaccgtcgggccccagtgcctgttact
aaatggcagtttggcagtatagtactgcctccacctcagagagcttacaaggccgaagag
aaggcagactgtgacaaaaagagaccagcgagagggctgttacatcctgcatcagagagt
gaggacttcacaatgaaggacatgaacagtgctccgacctttgaactaagaatggaggat
gacattggagaaagttgtgcattggagaaggatagctttggagcaagtcacacagtagaa
agggatggctttggaacaagtcatgctttggagagggatggctttggagcaagtcaaggt
ttggagactgatgactttggagcaagtcacacagtagaaagagatggctttggagcaagt
catgctttggagagagatggctttggagcaagtcaaggtttggagactgatgactttgga
gcaagtcacacagtagaaagagatggctttggagcaagtcatgctttggagatggatggc
tttggagcaagtcatgctttggagagggatggctttggagcaagtcaaggtttggagact
gatgactttggagcaagtcacacagtagaaagagatggctttggagcaagtcatgctttg
gagatggatggctttggagcaagtcaaggtttggagactgatgactttggagcaagtcac
acagtagaaagagatggctttggagcaagtcatgctttacagagggatggcgttggagaa
aaactgctattcaatgagggtgacgtcactgagggccacagggacagcacagaaagccag
tgtgtaattgggttagttgaccagcagggggctctgcatggagacacagcccagtcaaag
ggggagatcgtgacaggaggaggaccaagggagaacctcagcgagagagaccccatcaag
aggaaacggctcttcggtgatatgactactgacaaccagagagggatagggggtggagag
atggagggaagagtggagagggagagaaaggatgacatcaataaaggagggatgaagaaa
aagattgagaggaagaacagcaggagtagtaccaaaccccaccagcagaggaaggtgtca
ccctcactggggaagatgagggatggagagggccagggggtgacagagagggatagtcac
ccagaggagaggaagaacatggatgggccattgatgacagttgcacagaggaacagtgga
ggaagcacagaaccattagctgctggacatttcattccgaagtcgtctcaggagagtggg
agagtattcagagccccccctctgcgggccacccgtctgggacagacccccctggctact
aatcatcacaacaacactcaggctggtgatggaggctccagagagagggggttgagtata
gatcctgcactaaccaacccctctcatgctgggcatggaagggccgcagggctggggtcc
ggcctgacctctatacgtgctagtggtgaggaggagagcagcggccctcaccctctcccc
tctgcccaacaaccgcccctgacccctaccttctccctcaacagtaaacaaggcgcccct
ctgcccaaaatcgccctcttcaggcggccggtgaaatgggaaccccctcaatcctgtcag
gagaaagcaaggaccttgcaagggggccaggagtggtgcaaaacccaaacccccaaacac
ccagacctgaccccagcctttagcctagacccccgagccaaaaccaagaccctccacaag
actgagggaaccaagagtgttgctctaacccctaacccctcacatcgacccccagccaac
ccagttaggccaagacagggggtcccaatgggggagaggggacttgaatcaaccagggac
cattctaattcagtcactccccagcatagatcctccaaaacccccaaaccacccaagccg
aagtgggacaaaactgggcctaaccagggtcaactcatcccagaaactgaaccagagagt
ggaagcggtgccggtgacccccaggcccagtccaaccaatccaaaacctgtctgactaca
gccatgatctctgaccccagagtaacggatgctgggaagttgagtcctgaagagagaggc
agggtgctggaggaggcagggcaggccagtgcgctggttctgaccatggtgtaccaggac
ggaaccactcagatggacccagaacagaagctgagcccatcagtgtgtggggtgctggtg
atgttgaaaagagatctggacccgactggaccaataccaggaccagaggagggggtggca
caacgagacagtctggtttacctcagactggaacagaaacctgcatgggcccagagccac
caagaccacaacctagacctcttcaatagagagatgctgctgcaggtagtatcagggtct
caactggtggtgtgttacaaggccaaagacctggtccgtacagcactgcagcactacaga
ccagacctacactggaaacaattctcatcttgtcgcgtccaggacccccaggtagcagcc
tggctgttggacccagctgacccctcttcctgcttcaccaacctgctcaccaaacactgt
aggacaccccccagaacccccacacctgccctgggggcaaggaaggtgtcccaggttatc
tccagtctgtctctgctctacaggctgaatatggagctacgctctaaactacagagccag
ggtctgtgggagctgtactctaacatggagctgactatgatccctgtactggcagccatg
gagagccacaggatccatgtggacacggagtccctaaagacaacatcagagatgctgggg
actaagatgaagcagctagagcacgaggcccaccaggcagcaggccagatgtttctagtg
tccagcagcacccagctcaggacggttctgtttgagaagctgcgtctgcaggaccgctgt
gaaaacaagaagctccccaagactctcaacaaacaacagcagtctacatctgaggctgtt
ttgttgcagctccaggacctgcaccccctgccgaagatcattctcgaatacagacaggtt
cataagatcaagtccaccttcgtcgacgggattctgtcttgcgtgatgagtaagaactcc
atctcgtccacatggtaccagaccagtgcagtgactggaagaatctctgccaaacaccca
aacttccaggccctcccaaggcaaccggtgcagatcactaagaagcaatatgttcaagga
aaggaagcggaggtggtgacggttcacccacgggccatgttcatcccccaggacggctac
accttcctggctgcagatttctgccaggtggaactgcgtctgctggctcacctctcgtca
gaccctgagctgcagaggatcttcaacaacccacaggccgacgtcttcaccatgctggcc
tcacagtggaagggtgtgagtgaaggagaagtgagttcagaggatagagagcatgccaag
cgtatcgtctactctgtggtgtatggagcaggtagggagcgtctgtcgggcatcctgggt
gttagtgctgaacaggccagacacttccaggacagcttcctccacacctacagagaggtc
cagaccttcatacacaccaccatccaacagtgccacaaacaaggttacgtggtgtctatt
atgggccggcgaaggacacttcctcacatccactctacagactggggagtccgcatgcag
gctgagagacaggccgtcaactttgtggtccaagggtcagctgctgacctgtgtaagatg
gccatgatccgtatcttctctcaagtctcctcctccagctctctctccgccaggctgata
gctcagctccatgacgagctgctctacgaggtggaggactctcaggtggaggagttcgca
gtgttggtcaagaacactatggagtccctgcaacacatcgattgtctgggagttcatctc
aaagtccccctgaaggtggcggtctcaagtggcaagtcctggggctccatgtccgaacta
cacctcccccaaacatctctcccccctcttcctgagggcggcccggctggttga
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integrated database retrieval system