Salmo salar (Atlantic salmon): 106608817
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Entry
106608817 CDS
T04363
Symbol
gigyf1
Name
(RefSeq) GRB10 interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106608817 (gigyf1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106608817 (gigyf1)
Surveillance factors
Other surveillance factors
106608817 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
Motif
Other DBs
NCBI-GeneID:
106608817
NCBI-ProteinID:
XP_014062452
UniProt:
A0A1S3SDN2
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Position
ssa07:19532568..19575507
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AA seq
1066 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFAAILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVMRLMGKGGGVAPAGMARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEVGFGRGAREIYRSQSWDDRGERRFEKPARAREGVR
VGLEEVTGVPVPGVPRKDYTRSDSENWRTLREEQEEEEGADPGGSWRLAGARRLDDGGPR
SAGWREHDGPVEGRRRKFEFDFGGGRRRAGSEGLEDDRDGLPEWCTDEEDGEMGTFDASG
AFLPLSKDDEFDFQGIEEEEESLSGMERIMNGGQRVDAKESASDGEVKNRTSPPSSSPPA
PPALGLNPPMPQLSLTVAELEASQMADSHPLPAPLPAPAPLAVPVPAKASKMPSEVVVPE
GSPAEGSTTQQSPSTSSSLPSPPPSASSSSAATHLPPPPGGDTEDDEGMKHLQQEAEKMV
ASLQDTSLEEECFTQMLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMYEWFQ
AGYFSMSLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRPPPPRPQPLPPRGPA
GNMDQDRLKKQQDLAAAALYQQLQQQQQLFQLINRCGEQGMMPSVNRSMSVPDTGSMWDM
HTSASQQSGGEASLWDLTMNSSTQGPTLEQLQKLQQERREAELRTKREEEEQRKRREEKR
RQQEEQKRREEEEIFRRKQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKPGAKGL
SLLDMQEAERLLKQQQRAQQQQRERHQGMSMGQWGDGGAVPGGLWGGGGGMEGKAGGGGA
MGLWEEAVKNQSRGGSMQGLKNSRSSPSLSEQYMLSRRKQRTDEEDKLLKLLQGIKTPQD
GFTTWCEQMLHALNTQANNTSSPLDVSTIVAYLKEVESPYEVLDFICSYLGDTMEAKEFA
KQFLERRAKQKQNQKRQQEQLSKEVAGLTMNNFPLQDSMRGVNPSALQSMFQAAHMAKGG
MYDPQGGMKKKKQPVMLQSDPSILGYSFHNAGERLSLNEMEMVEDY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggcccagaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagcgtggcagtgatg
aggctcatgggtaaaggaggtggagtcgcccctgcgggcatggcccgaggcagaggcact
acacgaggaggaggccgagggcgaggccgaggagagagtggaggattctaccaaagaagt
attgaggagggagaggtgggcttcggccgcggagccagagagatctatcgcagccagagc
tgggatgacaggggcgagaggcgttttgagaagcctgcgcgtgccagggagggggtacgt
gttggattagaggaggtgacgggtgtccctgtgccgggggtgccgaggaaggactacaca
cggtctgacagtgagaactggcgtaccctcagagaggagcaggaggaagaggagggggcc
gacccaggaggcagctggagactggccggagcacgtagattagatgacggtggtccaagg
tctgcaggctggcgggagcacgacgggccagttgaggggcgtcgcaggaagtttgagttt
gacttcggcggaggtcgcaggcgggccgggagcgaagggttagaggacgacagagacgga
ctgcctgagtggtgcactgatgaagaggacggagaaatgggcaccttcgacgcatccgga
gctttcctccccctatccaaggatgatgagtttgacttccagggtatagaggaggaggaa
gagagcctgtcaggcatggagaggatcatgaatggaggacagagagttgacgccaaggaa
tcagccagtgacggggaggtgaagaacagaaccagtcccccctcctcctctccccctgcc
cctccagctctgggcctcaacccccccatgccccagctctccctcacagtggctgagctg
gaggcctctcagatggccgacagccaccctcttcctgctcctctccctgctcctgctcct
cttgctgttcctgtccctgccaaggccagcaagatgccaagtgaagtagtagttcctgaa
ggatcaccagcagagggctccaccacccagcagagccccagcacctcctccagtctgcct
tcaccccctccctccgcctcctcctcctctgctgctacccacctccccccgccaccaggg
ggtgacaccgaggacgacgagggcatgaagcacctgcaacaggaggcagagaagatggtg
gcgtccctgcaggacacgtctctagaggaggagtgttttacccagatgctacaggagagc
agaaacacagcctctgccctgcccctctcccacgacgctgccatgaagtggttctacaag
gacccccaggcagagatccagggtccgttcaccactctggagatgtacgagtggttccag
gcgggctacttctccatgtctctgctggtgaagaggggctgcgacgagggcttccagccg
ctgggcgacgtcatcaagatgtgggggcgcgtgcctttcgcccccgggccctccccaccg
cccctgctggtgagacctccaccaccgcgccctcagccgctgccaccccggggtcctgct
ggtaacatggatcaggaccgtttgaagaagcaacaggacttggcagcagcagctctctat
cagcaactccagcagcagcagcagctattccagctcatcaacaggtgtggagaacagggt
atgatgccttcagtgaacaggtcgatgtcagtgccagatacagggtccatgtgggacatg
catacctcagcttcacagcaatcaggcggtgaagccagtttatgggacttaacaatgaat
tcttcaactcagggtccaacactcgaacagcttcagaagctccagcaggagaggagggag
gctgaactcaggacgaagcgcgaagaggaggagcagcgcaagaggagagaggagaaaagg
aggcagcaggaggagcagaagaggagggaggaggaggagatcttcagacgcaaacagtgt
cgccagcagcaggagctaatcatgaagctcctccagcaggcccctcagcagggctcaggc
tccggggtggggtctggctggggcactgggggcctcaacaagccaggggccaagggcctc
agtctgctggacatgcaggaagctgagaggcttctcaaacagcagcagagagcccagcag
caacagagggaacgccatcaaggcatgtccatgggtcagtggggggacggaggtgcggtc
ccagggggcctgtggggaggtggaggggggatggagggtaaggctgggggcggaggggcc
atgggtctgtgggaggaggcggtgaagaaccagtccagaggtggcagcatgcagggtctg
aagaacagccgcagcagcccctcactcagtgagcagtatatgttaagtcgtaggaagcag
cgtacggatgaggaggacaagctgctgaagctgctgcagggcatcaagacgcctcaggac
gggttcaccacctggtgtgaacagatgctgcacgccctcaacacccaagccaacaacacc
tcctccccactggacgtgtccacaatcgtggcgtacctgaaggaggtggagtctccctat
gaggtgttggactttatctgctcctacctgggagacaccatggaagccaaagagttcgcc
aagcagttcctggagcgccgtgccaaacagaagcagaaccagaagaggcagcaggagcag
ctatcaaaggaagtagcagggctgaccatgaacaacttccctctgcaggactccatgcgg
ggcgtgaaccccagcgcactgcagtctatgttccaggcagcccacatggctaagggaggg
atgtacgacccccaggggggcatgaagaagaagaaacagcccgtgatgctgcagtctgac
cccagcatcctaggctactcgttccacaacgcgggcgagcgcctgagcctaaatgagatg
gagatggtggaggattactga
DBGET
integrated database retrieval system
