KEGG   Salmo salar (Atlantic salmon): 106608922
Entry
106608922         CDS       T04363                                 
Name
(RefSeq) collagen alpha-5(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
sasa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106608922
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106608922
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106608922
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106608922
   00536 Glycosaminoglycan binding proteins [BR:sasa00536]
    106608922
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   106608922
Glycosaminoglycan binding proteins [BR:sasa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106608922
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 106608922
NCBI-ProteinID: XP_014062615
UniProt: A0A1S3SE43
LinkDB
Position
ssa07:complement(22108202..22192990)
AA seq 1689 aa
MNKNLKSLRNLAVGLVLVTLCIVVQESESAACHGCAAGSKCDCSGVKGGKGERGFPGLQG
QPGVPGFPGPEGPIGGRGEKGSDGPSGPSGPKGIRGPPGLPGFPGTPGIPGLPGQDGPPG
PRGTAGCNGTKGERGFPGSPGFPGLEGRSGPPGLPGQKGDPGDVISNDRFGQKGGVGLPG
LPGVPGNPGPAGLSGPIGPPGPRGYEGRSGPPGPPGPKGNMGLNFQGPKGDKGDPGLQGP
PGPPGQVGEQKRPTELEIQRGEKGDQGLPGPAGDPGYPGPPGVSGGSKGEKGEPGEAGKR
GKPGKDGDPGPAGFPGSKGDPGGPGLPGRDGDRGDKGDRGYPGPPGVVINGQTGARVGPK
GEPGFPGSSGRKGDRGQPGLSGPPGQPGTPGTGGVGQPGSPGFPGERGQKGDEGQPGISR
PGPPGRNGAPGLQGPPGPPGAAGVSTGGGNCLGGAPGLPGQQGDRGFQGETGQKGDKGET
CVNCFSRGNSIPGAPGPPGPPGFPGGPGGPGVKGDRGYPGGPGPSGSSGLPGPQGAPGFP
GEKGDPGEAIAVDGVRGDKGDTGFPGPPGLPGLDGGPGRNGVPGAPGPKGTSGSLLVKGE
RGPPGEPGLQGLPGDRGVPGSPGFGPQGPPGEKGVQGVSGRTGTPGAPGTKGEPGQTIAE
KGLPGPRGQDGDPGLPGNPGNPGGPGQPGFPGLPGAKGDPGLSGIGLPGPPGAKGFPGSS
GVPGSPGGPGRPGVDGLPGEPGGPGAKGEPGFGLPGPQGPPGFPGPKGLPGPKGDSGFPG
NPGSPGRSGFDGGPGAKGDSGINGIPGARGPPGSPSIGSQGIPGPIGPPGPMGSPGYSGA
NGEKGDPGPPGLDIPGLPGDRGSPGFPGSPGVVGPQGNPGGPGRDGLPGLPGGKGDMGVM
GAPGPLGSPGNPGAPGFPGPKGDDGFPGRPGGPGGSGLKGDRGEPGIAGLPGPSIPPQEL
KGGKGEPGAPGLGGLPGQKGIPGLPGDAGIPGQDGRPGLPGPQGPKGDAGIPGGPGSPGA
PGAKGNMGEMGFPGPTGAKGTPGQSGRSGGPGSSGAPGFPGAKGEPGSPGFGSPGATGPK
GEPGQSGFPGQNGVKGNPGTPGLPGFPGGPGAKGDPGLPGFQGSPGIPGPKGLDGIPGNP
GLSGPPGRPGENGRAGSPGFPGDKGQAGRDGIPGPAGVKGDPGLPGFGGPGSPGLPGLPG
AKGDLGAPGSSGSPGFPGQKGEMGFPGLPGSPGSVGPPGAPGVALQGPKGNAGPPGPPGR
GGPEGPPGPPGSEGPRGPVGSGGTKGEKGIPGIPGSPGFPGAKGEFGSPGFPGNAGLPGA
KGLKGDIGLPGVPGFPGPKGDSGIPGSSGLPGDPGDVGPAGPPGDPGFAPAPIVLKGERG
PPGPSGLPGGRGATGPPGLEGLSGQPGQPGDPGPEGPPGFSGASGRKGDPGPAGQPGERG
YPGPPGSDGLQGPPGPSGSASVAHGFLITRHSQGEDVPLCPEGTSLIYDGYSLLYVQGNE
RAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPTPMPMTMAPITGEG
IKPYISRCAVCEAPAMVIAVHSQTIQIPTCPSYWEPLWIGYSFMMHTSAGAEGSGQALAS
PGSCLEEFRSAPFIECHGRGTCNYYGNSYSFWLATVDQSEMFRKPQSETLKAGNLRTRVS
RCVVCMKRT
NT seq 5070 nt   +upstreamnt  +downstreamnt
atgaataaaaacttgaagagtctgcgaaatctcgcggtggggttggtgctcgtaaccctg
tgtatcgtggtccaggagtcggaatcagcggcgtgtcatggctgtgcagcgggatcaaag
tgtgactgcagcggagtaaaaggaggcaagggcgagaggggtttcccaggactacagggt
cagccaggcgtaccagggttccccggacctgaggggccaatcggaggcaggggagagaag
ggtagtgacggaccttcagggccatcaggtccaaaaggaattaggggacctcctggactg
cccggattcccaggaacaccaggaattccaggtctcccaggacaggacgggcccccgggc
ccaagaggaactgcaggctgcaacggaactaagggtgagagaggattccctggaagtcca
gggttccccggcctggaggggcgatcgggtccacctggtttgccaggacaaaagggagac
ccaggtgatgtcatctcaaatgaccgctttggacagaaaggaggtgtaggtttacctggc
ttgcctggagttcctggtaacccaggccctgcaggattgtcaggccctatcggtccacct
ggccccagaggttatgagggtcgttccgggcctcctggtcctcccggtcctaagggtaac
atgggattgaacttccaaggtcccaaaggagataagggggatccaggtctgcaggggcct
cccggtccaccaggacaggtcggggagcagaagagacccaccgagttagagatccagaga
ggagagaaaggtgatcaaggtttacctggtccagctggtgatcctggctatcctggtccc
cctggtgtatctggaggttcgaagggagagaaaggagagcctggagaagcaggcaaacgc
ggcaaaccggggaaagatggcgacccgggtcctgctggattccctggtagtaaaggagac
ccaggcggcccaggtctgccaggtcgggatggggacaggggggacaaaggtgaccgtgga
taccctggacctccgggcgtggtgattaatggtcagacaggagcacgtgtggggccaaaa
ggagagcctggtttccccgggtcatcaggaaggaaaggagacagaggacaacctggtctc
tcaggtcctccaggacaaccaggaaccccaggtaccggaggtgtaggccaacccggttcc
ccaggcttcccaggagagaggggccagaagggagacgagggccagccaggcatctcccgc
cctgggcccccaggacgaaatggggcccctgggcttcagggaccaccaggccctcccggg
gccgcaggggtctccacagggggcggtaactgtttaggaggggcccccgggttaccagga
caacaaggagacagagggtttcaaggagagaccggacagaaaggtgacaagggagaaacc
tgtgtgaactgtttctcacgtgggaactccatccctggagcaccaggccctcctggacct
cctgggttcccaggtggaccaggaggaccaggggttaaaggtgacagaggatatccaggt
ggcccagggccctcaggttcttctggtttgcctggtccccagggtgcacctggtttccca
ggagagaagggtgacccaggtgaggctattgctgtggatggggtgaggggcgacaaggga
gacacagggttccccggaccccctggcctgcctggtctggacggaggacctggtcgcaat
ggagttcctggagctcctggacccaaaggaacatctggctctctgttagtgaagggtgag
cgagggcctccgggtgagcccggtctgcagggtctcccaggtgacaggggtgtccccgga
tccccaggcttcggcccccaggggccccctggagagaagggtgtgcagggcgtctcaggg
agaacgggaacacctggagcaccaggcactaaaggtgagccgggtcaaacgatagcagag
aagggactcccaggacccaggggacaggatggagacccgggtcttcctggaaacccaggc
aaccccggcgggccaggacagcccggtttccccggcttaccaggtgccaagggcgacccc
ggcctctccggcattggactgccaggaccccccggcgctaaaggattcccaggctcatct
ggtgtgccaggtagtcccggaggtccaggaagaccaggagtggacggcctccccggtgag
ccaggtggacctggagctaagggagagccaggattcgggctgccaggtccccagggccct
ccaggcttccctggacccaaaggattacctggacccaaaggagactccggtttccccggc
aaccccggctcgcccggacgttccggcttcgacggtggccctggtgccaaaggtgactct
ggtatcaatggtatacccggagcccgtggacctccaggttcgccctccatcggctctcag
ggcatccccggccccattggacccccaggacccatgggctctccagggtactcaggtgcc
aacggagagaagggagaccccggtcctcctggcctggacattccagggttgccaggcgac
agaggaagtcccggtttccccggcagccccggggtagttggaccacagggtaaccctggc
ggccctggccgagacggactgcctggcctgcctggtggtaaaggagacatgggtgtgatg
ggagctcctggacctctgggatcccctgggaaccccggagcccccggcttccctggacct
aaaggtgacgatggtttcccagggcgaccaggtgggcccggcggttcaggtttgaaggga
gacaggggagagcccggtatcgcgggactcccaggacccagcattcctccccaggaactg
aagggtggcaagggagaaccaggagctccaggtttgggaggactgccaggtcaaaagggt
atccctggtctccctggagatgctggtataccaggacaggacggacgacctgggttgcca
ggacctcaaggtcccaaaggagacgcaggtatccctggaggaccaggctcaccaggagcc
ccaggagcgaaaggcaacatgggagagatgggcttcccaggacccacaggggcgaaagga
actccgggtcaatcaggtcggtcgggtggacccggtagttcaggagcaccagggttccct
ggagctaagggagagcccggttcccctggttttggttccccaggagctacaggtcccaag
ggtgagcccggtcagtcaggattccccgggcaaaacggagtaaaaggaaaccctggaaca
ccaggtcttccagggtttcctggcggccctggcgccaaaggtgaccccggcctcccagga
ttccaaggttctcccgggattcccgggcctaagggtctggatggtatcccaggtaacccc
ggtctcagcggaccacccggccgaccgggagagaacggccgtgccggatcacctgggttc
ccaggggacaagggtcaggcgggtcgtgacggaatccctggaccagcgggagtcaaagga
gacccaggtcttcctggtttcggtggccccggttctcctggtctcccaggattaccaggt
gctaagggagatcttggcgcccctggttcttccggtagccctggcttccctggtcagaag
ggagagatgggtttccctggcctgcctgggtcccctggcagcgttgggccccctggcgcc
ccaggtgtggccctccagggtcccaaaggtaacgccggcccccccggaccccctggaaga
ggagggcccgaaggtcctccaggtcctcctggctccgaaggtccccgtggccctgtcggc
agcggagggaccaaaggtgagaagggaattcccggaattcctggatcgcctggtttcccc
ggagcaaagggagaattcggatcgcccggattcccgggtaatgctggccttcctggtgcc
aaagggctgaagggagacatcggactgcctggagttcccggattcccaggaccaaaggga
gattctggaatccctggatcatctggtctccctggagaccccggagatgttggccctgct
ggacccccaggtgacccaggttttgctccagcccccatcgtgctgaagggagagcgtggc
ccccccggcccttcaggtctaccaggcggccgtggcgccacaggaccccccggactggag
ggactctcaggtcagcccggtcagccaggagaccccggtcctgagggacccccaggattc
agtggagcctccggccgcaaaggagacccaggacccgccggacagccaggtgagcgtgga
tatcccggtccccctggttcagatggcctgcagggccccccaggtccatctggatctgcc
tctgtggcgcacggcttcctgatcaccagacacagccagggcgaggacgtccccctctgc
ccagagggcaccagcctcatctacgatggctactctctactctacgtacagggcaacgag
agggcacacggacaggatctgggaactgctggtagttgcctgcgccggttcagcaccatg
ccattcatgttctgtaacatcaacaacgtgtgtaacttcgcctcccgtaacgactactcc
tattggctgtccacacccacgcccatgcccatgactatggcccccatcaccggagagggc
atcaaaccttacatcagcaggtgtgcagtgtgtgaggcccctgccatggtgatcgctgta
cacagtcagaccattcagatccccacctgccccagctactgggaaccactgtggatcgga
tactccttcatgatgcacactagtgctggtgctgagggttcgggtcaggctctggcctct
cctgggtcctgtctagaggaattccgaagcgctcccttcatcgagtgccacggtcgggga
acctgcaactactacggcaactcctacagcttctggctggccaccgtcgaccaatcagaa
atgttcaggaagccacagtcggagacgctgaaagcaggtaacctgcggacacgcgtcagc
cgctgtgtggtctgtatgaagaggacgtaa

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