KEGG   Salmo salar (Atlantic salmon): 106608922
Entry
106608922         CDS       T04363                                 
Name
(RefSeq) collagen alpha-5(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04382  Cornified envelope formation
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
sasa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106608922
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106608922
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106608922
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    106608922
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106608922
   00536 Glycosaminoglycan binding proteins [BR:sasa00536]
    106608922
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   106608922
Glycosaminoglycan binding proteins [BR:sasa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106608922
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 106608922
NCBI-ProteinID: XP_014062615
UniProt: A0A1S3SE43
LinkDB
Position
ssa07:complement(22108202..22192990)
AA seq 1689 aa
MNKNLKSLRNLAVGLVLVTLCIVVQESESAACHGCAAGSKCDCSGVKGGKGERGFPGLQG
QPGVPGFPGPEGPIGGRGEKGSDGPSGPSGPKGIRGPPGLPGFPGTPGIPGLPGQDGPPG
PRGTAGCNGTKGERGFPGSPGFPGLEGRSGPPGLPGQKGDPGDVISNDRFGQKGGVGLPG
LPGVPGNPGPAGLSGPIGPPGPRGYEGRSGPPGPPGPKGNMGLNFQGPKGDKGDPGLQGP
PGPPGQVGEQKRPTELEIQRGEKGDQGLPGPAGDPGYPGPPGVSGGSKGEKGEPGEAGKR
GKPGKDGDPGPAGFPGSKGDPGGPGLPGRDGDRGDKGDRGYPGPPGVVINGQTGARVGPK
GEPGFPGSSGRKGDRGQPGLSGPPGQPGTPGTGGVGQPGSPGFPGERGQKGDEGQPGISR
PGPPGRNGAPGLQGPPGPPGAAGVSTGGGNCLGGAPGLPGQQGDRGFQGETGQKGDKGET
CVNCFSRGNSIPGAPGPPGPPGFPGGPGGPGVKGDRGYPGGPGPSGSSGLPGPQGAPGFP
GEKGDPGEAIAVDGVRGDKGDTGFPGPPGLPGLDGGPGRNGVPGAPGPKGTSGSLLVKGE
RGPPGEPGLQGLPGDRGVPGSPGFGPQGPPGEKGVQGVSGRTGTPGAPGTKGEPGQTIAE
KGLPGPRGQDGDPGLPGNPGNPGGPGQPGFPGLPGAKGDPGLSGIGLPGPPGAKGFPGSS
GVPGSPGGPGRPGVDGLPGEPGGPGAKGEPGFGLPGPQGPPGFPGPKGLPGPKGDSGFPG
NPGSPGRSGFDGGPGAKGDSGINGIPGARGPPGSPSIGSQGIPGPIGPPGPMGSPGYSGA
NGEKGDPGPPGLDIPGLPGDRGSPGFPGSPGVVGPQGNPGGPGRDGLPGLPGGKGDMGVM
GAPGPLGSPGNPGAPGFPGPKGDDGFPGRPGGPGGSGLKGDRGEPGIAGLPGPSIPPQEL
KGGKGEPGAPGLGGLPGQKGIPGLPGDAGIPGQDGRPGLPGPQGPKGDAGIPGGPGSPGA
PGAKGNMGEMGFPGPTGAKGTPGQSGRSGGPGSSGAPGFPGAKGEPGSPGFGSPGATGPK
GEPGQSGFPGQNGVKGNPGTPGLPGFPGGPGAKGDPGLPGFQGSPGIPGPKGLDGIPGNP
GLSGPPGRPGENGRAGSPGFPGDKGQAGRDGIPGPAGVKGDPGLPGFGGPGSPGLPGLPG
AKGDLGAPGSSGSPGFPGQKGEMGFPGLPGSPGSVGPPGAPGVALQGPKGNAGPPGPPGR
GGPEGPPGPPGSEGPRGPVGSGGTKGEKGIPGIPGSPGFPGAKGEFGSPGFPGNAGLPGA
KGLKGDIGLPGVPGFPGPKGDSGIPGSSGLPGDPGDVGPAGPPGDPGFAPAPIVLKGERG
PPGPSGLPGGRGATGPPGLEGLSGQPGQPGDPGPEGPPGFSGASGRKGDPGPAGQPGERG
YPGPPGSDGLQGPPGPSGSASVAHGFLITRHSQGEDVPLCPEGTSLIYDGYSLLYVQGNE
RAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPTPMPMTMAPITGEG
IKPYISRCAVCEAPAMVIAVHSQTIQIPTCPSYWEPLWIGYSFMMHTSAGAEGSGQALAS
PGSCLEEFRSAPFIECHGRGTCNYYGNSYSFWLATVDQSEMFRKPQSETLKAGNLRTRVS
RCVVCMKRT
NT seq 5070 nt   +upstreamnt  +downstreamnt
atgaataaaaacttgaagagtctgcgaaatctcgcggtggggttggtgctcgtaaccctg
tgtatcgtggtccaggagtcggaatcagcggcgtgtcatggctgtgcagcgggatcaaag
tgtgactgcagcggagtaaaaggaggcaagggcgagaggggtttcccaggactacagggt
cagccaggcgtaccagggttccccggacctgaggggccaatcggaggcaggggagagaag
ggtagtgacggaccttcagggccatcaggtccaaaaggaattaggggacctcctggactg
cccggattcccaggaacaccaggaattccaggtctcccaggacaggacgggcccccgggc
ccaagaggaactgcaggctgcaacggaactaagggtgagagaggattccctggaagtcca
gggttccccggcctggaggggcgatcgggtccacctggtttgccaggacaaaagggagac
ccaggtgatgtcatctcaaatgaccgctttggacagaaaggaggtgtaggtttacctggc
ttgcctggagttcctggtaacccaggccctgcaggattgtcaggccctatcggtccacct
ggccccagaggttatgagggtcgttccgggcctcctggtcctcccggtcctaagggtaac
atgggattgaacttccaaggtcccaaaggagataagggggatccaggtctgcaggggcct
cccggtccaccaggacaggtcggggagcagaagagacccaccgagttagagatccagaga
ggagagaaaggtgatcaaggtttacctggtccagctggtgatcctggctatcctggtccc
cctggtgtatctggaggttcgaagggagagaaaggagagcctggagaagcaggcaaacgc
ggcaaaccggggaaagatggcgacccgggtcctgctggattccctggtagtaaaggagac
ccaggcggcccaggtctgccaggtcgggatggggacaggggggacaaaggtgaccgtgga
taccctggacctccgggcgtggtgattaatggtcagacaggagcacgtgtggggccaaaa
ggagagcctggtttccccgggtcatcaggaaggaaaggagacagaggacaacctggtctc
tcaggtcctccaggacaaccaggaaccccaggtaccggaggtgtaggccaacccggttcc
ccaggcttcccaggagagaggggccagaagggagacgagggccagccaggcatctcccgc
cctgggcccccaggacgaaatggggcccctgggcttcagggaccaccaggccctcccggg
gccgcaggggtctccacagggggcggtaactgtttaggaggggcccccgggttaccagga
caacaaggagacagagggtttcaaggagagaccggacagaaaggtgacaagggagaaacc
tgtgtgaactgtttctcacgtgggaactccatccctggagcaccaggccctcctggacct
cctgggttcccaggtggaccaggaggaccaggggttaaaggtgacagaggatatccaggt
ggcccagggccctcaggttcttctggtttgcctggtccccagggtgcacctggtttccca
ggagagaagggtgacccaggtgaggctattgctgtggatggggtgaggggcgacaaggga
gacacagggttccccggaccccctggcctgcctggtctggacggaggacctggtcgcaat
ggagttcctggagctcctggacccaaaggaacatctggctctctgttagtgaagggtgag
cgagggcctccgggtgagcccggtctgcagggtctcccaggtgacaggggtgtccccgga
tccccaggcttcggcccccaggggccccctggagagaagggtgtgcagggcgtctcaggg
agaacgggaacacctggagcaccaggcactaaaggtgagccgggtcaaacgatagcagag
aagggactcccaggacccaggggacaggatggagacccgggtcttcctggaaacccaggc
aaccccggcgggccaggacagcccggtttccccggcttaccaggtgccaagggcgacccc
ggcctctccggcattggactgccaggaccccccggcgctaaaggattcccaggctcatct
ggtgtgccaggtagtcccggaggtccaggaagaccaggagtggacggcctccccggtgag
ccaggtggacctggagctaagggagagccaggattcgggctgccaggtccccagggccct
ccaggcttccctggacccaaaggattacctggacccaaaggagactccggtttccccggc
aaccccggctcgcccggacgttccggcttcgacggtggccctggtgccaaaggtgactct
ggtatcaatggtatacccggagcccgtggacctccaggttcgccctccatcggctctcag
ggcatccccggccccattggacccccaggacccatgggctctccagggtactcaggtgcc
aacggagagaagggagaccccggtcctcctggcctggacattccagggttgccaggcgac
agaggaagtcccggtttccccggcagccccggggtagttggaccacagggtaaccctggc
ggccctggccgagacggactgcctggcctgcctggtggtaaaggagacatgggtgtgatg
ggagctcctggacctctgggatcccctgggaaccccggagcccccggcttccctggacct
aaaggtgacgatggtttcccagggcgaccaggtgggcccggcggttcaggtttgaaggga
gacaggggagagcccggtatcgcgggactcccaggacccagcattcctccccaggaactg
aagggtggcaagggagaaccaggagctccaggtttgggaggactgccaggtcaaaagggt
atccctggtctccctggagatgctggtataccaggacaggacggacgacctgggttgcca
ggacctcaaggtcccaaaggagacgcaggtatccctggaggaccaggctcaccaggagcc
ccaggagcgaaaggcaacatgggagagatgggcttcccaggacccacaggggcgaaagga
actccgggtcaatcaggtcggtcgggtggacccggtagttcaggagcaccagggttccct
ggagctaagggagagcccggttcccctggttttggttccccaggagctacaggtcccaag
ggtgagcccggtcagtcaggattccccgggcaaaacggagtaaaaggaaaccctggaaca
ccaggtcttccagggtttcctggcggccctggcgccaaaggtgaccccggcctcccagga
ttccaaggttctcccgggattcccgggcctaagggtctggatggtatcccaggtaacccc
ggtctcagcggaccacccggccgaccgggagagaacggccgtgccggatcacctgggttc
ccaggggacaagggtcaggcgggtcgtgacggaatccctggaccagcgggagtcaaagga
gacccaggtcttcctggtttcggtggccccggttctcctggtctcccaggattaccaggt
gctaagggagatcttggcgcccctggttcttccggtagccctggcttccctggtcagaag
ggagagatgggtttccctggcctgcctgggtcccctggcagcgttgggccccctggcgcc
ccaggtgtggccctccagggtcccaaaggtaacgccggcccccccggaccccctggaaga
ggagggcccgaaggtcctccaggtcctcctggctccgaaggtccccgtggccctgtcggc
agcggagggaccaaaggtgagaagggaattcccggaattcctggatcgcctggtttcccc
ggagcaaagggagaattcggatcgcccggattcccgggtaatgctggccttcctggtgcc
aaagggctgaagggagacatcggactgcctggagttcccggattcccaggaccaaaggga
gattctggaatccctggatcatctggtctccctggagaccccggagatgttggccctgct
ggacccccaggtgacccaggttttgctccagcccccatcgtgctgaagggagagcgtggc
ccccccggcccttcaggtctaccaggcggccgtggcgccacaggaccccccggactggag
ggactctcaggtcagcccggtcagccaggagaccccggtcctgagggacccccaggattc
agtggagcctccggccgcaaaggagacccaggacccgccggacagccaggtgagcgtgga
tatcccggtccccctggttcagatggcctgcagggccccccaggtccatctggatctgcc
tctgtggcgcacggcttcctgatcaccagacacagccagggcgaggacgtccccctctgc
ccagagggcaccagcctcatctacgatggctactctctactctacgtacagggcaacgag
agggcacacggacaggatctgggaactgctggtagttgcctgcgccggttcagcaccatg
ccattcatgttctgtaacatcaacaacgtgtgtaacttcgcctcccgtaacgactactcc
tattggctgtccacacccacgcccatgcccatgactatggcccccatcaccggagagggc
atcaaaccttacatcagcaggtgtgcagtgtgtgaggcccctgccatggtgatcgctgta
cacagtcagaccattcagatccccacctgccccagctactgggaaccactgtggatcgga
tactccttcatgatgcacactagtgctggtgctgagggttcgggtcaggctctggcctct
cctgggtcctgtctagaggaattccgaagcgctcccttcatcgagtgccacggtcgggga
acctgcaactactacggcaactcctacagcttctggctggccaccgtcgaccaatcagaa
atgttcaggaagccacagtcggagacgctgaaagcaggtaacctgcggacacgcgtcagc
cgctgtgtggtctgtatgaagaggacgtaa

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