Salmo salar (Atlantic salmon): 106608953
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Entry
106608953 CDS
T04363
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106608953
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106608953
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106608953
NCBI-ProteinID:
XP_014062681
UniProt:
A0A1S3SEA8
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Position
ssa07:complement(23524918..23529943)
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AA seq
291 aa
AA seq
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MYNMMEHELKPSGQQQSHQTAMSPVTGNSHPGSKSLCPPGGDPMDKVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYKYKPRR
KSKPLLKKDNQMGKYPLSAGNLLAAAAAQGQGGSPRMESYGWGPAGGYAGMQSEALGYTQ
QLHRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSHQQPNPVMSMVKPEPVSHSPTGG
PNHHRGPLQGDLRDMISMYIPGGDTNDPVSQRGGYSVQQHYLSGTVPLTHI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaacacgagttgaagccctctgggcaacagcagtcgcaccaaacc
gccatgtctccggtcaccggcaactctcacccggggtccaaatccctgtgtcctccgggc
ggggaccccatggacaaggtcaaaagacccatgaatgccttcatggtctggtctaggggc
cagcgccgcaagatggcccaggagaaccccaagatgcacaactctgagatcagcaagcgg
ctgggcgccgagtggaagctactgactgatgctgagaagcggccattcattgacgaagca
aagcgcctcagggcggtgcacatgaaggattaccccgattacaagtacaaaccacgccgt
aaatccaagcccctgctcaagaaggacaaccagatgggaaagtaccctctctctgccggg
aacctgctggctgcggccgcagcgcagggccaaggtgggagccccaggatggagagttac
gggtggggcccggcgggaggttacgccgggatgcagagcgaggccctgggctacactcag
cagctgcaccgctacgacctgtccgcgctccagtacccccaggccatgaccgcagcacag
acctatatgaacggcgccaacacttacagccccatgtcttacagcagcagccaccagcag
cccaacccagtcatgtccatggtgaagccagagccagtgtcacactccccgactggtgga
cctaaccaccaccgcgggcctctccagggggacctgagggatatgatcagtatgtacatc
cccgggggggacaccaatgaccctgtctcccagagaggaggatacagcgtccagcaacac
tatctcagtgggactgtgcctctcactcatatctag
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