Salmo salar (Atlantic salmon): 106609016
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Entry
106609016 CDS
T04363
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
106609016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106609016
Membrane trafficking [BR:
sasa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106609016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
TMF_DNA_bd
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
106609016
NCBI-ProteinID:
XP_014062814
UniProt:
A0A1S3SEP0
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All DBs
Position
ssa07:complement(25721332..25744730)
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AA seq
1455 aa
AA seq
DB search
MSLRPPTSTLDSPFAAWLSSLTIGDSERKTSSGQQREPLADFPTESTGQGLVQRCVVVQK
DQLGFGFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEVVKLIKSG
TYVALTLQGPPPSAAALPLHPLPTDLLPNQRTSLGGEAPPPPPPPLSPGLTSTPSQRITK
PLQNLDVQKHATQILRNMLEQGEAELQVTDLMEELLLNPSPSLEERIESAKRRAQQVRVK
IQQDLDGTRLEAVTSYVVAGEGRLSGDSSEGDFEACESPHSSPSTSSFRTPLYRRQGSDT
HTFSDSAGKAQIIGPEEEEEEDDSYPLNEMDGPFQDIELLKSRPAHMTVFMRYLFSQLLD
PNPLLFYLSVEAYLGSSPKDARALAPQICSHFLDPDAPLKIRVREEYLSDIESRLHAQED
IRGPLSELQQQVLPDIQDQIQDYRSKQMMGLGSLFGEGDLQQLDGDPAKERLVVDRQVTA
LWEILSKHEEESSSRLASAVLLYLRHSGIKLRDSRVFPGLSTEKEKWLAFFPKTKKLSSS
KKEKDGEDRKRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENHTEIPGEE
GAEGDPPRLSSSSLGEDSMDSPTVSMRLARSESLKAQGEGRRRGGSSGAETVPRSRSDVD
MEDCGEEGEGPGLRPLHHSTSSASSSSARSCENPTPPYTPRSSRRKSVEFPVALLPDAPA
LEEDVVDSHNWQETVAPQVLATLCPREVDRQAVIYELLTTEASHLRTLRVLDQVFFQKMR
CVLSSDELACIFPNLPQVYELHASLCEAMKKRRESPIVQGIGDIMLARFEGVAGEEFQEQ
ASHLCSQQSQALELIKNKQRKDPRFAHIIQECEASPHCRRLQLKDLLVSETQRLTKYPLL
LDNILKHTEAGSTDLPPLQQAQACCRGILQAVNEVVRETEHRQRLNQYQRRLDPTPQFKS
LDLTSKRMIHEGPLTWKVSKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRLLGGGGG
GSGDTKASFSPVVQLDSLLVRSVATDHKALYVISTTEQQIYELVAGTSSEKNIWKDQLEK
TISLAAGSSPLTNNRSTPISSPSLGNASPVSTGSHVYQSDDSMTEQAVSMGTNSPNDEDN
ELTPTTPTAQSGAFLHSEGRDYGKRQIGVAEAALEDVEMLKQLIFHNFEEVGWSHDSDGT
PTNETANERSPLNDRQRPASSESLLSASPSQLEAEHSEAPPSEVGSPSVHVVRKAVVAGS
PSIPDDITDVNLHSDQSPEPRGGASVRGNVFYLVMPTEQGDGLLDESHTDEVIGPPTLTS
TELPDLDQEVMLSNIQHHEEEGQVSSTLSAGDQSEPGNPRLEVGLGQSQKVLQSHVIKHV
DEIFHTIEELMSKLQKLRDIETAHHQLLKTLRELPVNQESDDLPRNQETVIRTPSLDRDP
GDAEPAKPEILSTGF
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcccccccacctcaacactggacagcccttttgctgcttggctcagcagc
ctgacgataggagactcggagcgcaagacctccagcggccagcagagggagcctctggct
gacttccccactgagagcacaggtcaaggtctggttcagagatgtgtggttgtacagaag
gaccagctagggttcggcttcactgtgtgtggcgagaggatcaagctggtgcagaatgtt
cgaccaggtggcgcagcggtcaaggcgggggtccacgagggagacagaatcataaaggtc
aatggctcgctggtgtcgtccatgtctcatcaggaagtggtgaagctcatcaagtctggg
acatatgttgctctgactcttcaaggaccgcccccttcagcagctgccctccccctacat
cccctccccactgacctcttacccaatcagcggacgtcactaggaggagaagccccacct
ccaccacctccacccctctcccccggactgaccagcaccccctcccaaaggatcaccaaa
ccactgcagaacctagacgtacagaaacacgctactcagatcctcaggaacatgctggaa
cagggagaggctgagcttcaggtaacagacttgatggaggaactgttactgaacccctcc
ccatccctggaggagcgaatcgaaagtgccaagcggcgggcccaacaagtcagggttaaa
atccagcaagatctggatggaactcgattggaagctgtgaccagctatgtagtagcagga
gaaggtcggttgtcgggggattcaagtgaaggagactttgaggcctgtgagagcccccac
tcctccccctccacctcctccttcaggacccccctctaccggagacagggctccgacaca
cacaccttctccgactcggctgggaaggctcagatcattggcccggaggaagaggaggaa
gaggacgacagctatccgctcaatgagatggacggcccatttcaggacatagaacttctc
aagtcgcgaccggcccacatgaccgtgttcatgagatacctcttcagccagctactggat
cccaatccgctgctgttctacctgtcggtggaggcctacctgggctccagccctaaagac
gcccgtgccctcgccccacagatctgctcccacttcctggaccctgatgctccattgaaa
atcagagtacgggaagaatacctgtccgatatagagagtcgtctccatgcccaggaggac
atcaggggacctctttctgagctccaacagcaggtgctgcctgacattcaggaccaaata
caggattacaggagtaagcagatgatgggtctgggttctctgtttggagagggagacctg
cagcagctggatggagacccagccaaggaaagactagtggtggacagacaggtcactgct
ctctgggaaatactctcgaagcacgaagaggagagcagttctcgtctagcctctgcggtg
ctgctgtacctccgtcactcaggcataaagctgagggactccagggtgttcccaggcctc
agcactgagaaggagaagtggctcgccttctttcccaagaccaagaagctgagcagttca
aagaaagagaaggatggagaggacaggaagagaaaccccatcctgaagtatatcggcaag
cccaggagcacctctcagtccacgttccatgtccccttgtctcccactgaagtgcgtccg
ggcagtgtgaggaacatcatccagcagtttgagaaccacacagagatccccggggaggag
ggggccgagggagaccctccgagactgtcctccagtagcctgggagaggacagcatggac
agccccacggtgtcgatgcgtctggctcgtagtgagtctctgaaggcgcagggggagggg
cgtcggcggggcgggtcctcgggggcggagacagtacctcggtcccgtagcgatgtggac
atggaggactgtggagaggagggtgaagggccgggcctgagacccttacaccacagcacc
tcctctgcctccagcagctcagcacgatcctgcgagaaccccacccctccgtacacccct
cggtcttccagaagaaagagtgtggagttcccggtggccttgctccctgacgccccagcc
ctagaggaggacgtggtggacagccacaactggcaggagacggtggccccgcaggtcctg
gctactctctgtccccgagaggtggacagacaggctgtcatctacgagttgctgacgacg
gaggcgtctcacctgcgtacactcagggtgttggatcaggtgttcttccagaagatgagg
tgtgttctgagctctgacgagctggcctgcatcttccccaacctgcctcaggtctacgag
ctccacgcgagtctgtgcgaagccatgaagaagagaagagaatctcccatcgttcagggc
atcggcgacatcatgctggccaggtttgagggcgtggcgggggaggagtttcaggagcag
gcgtcccacctgtgcagtcagcagtctcaggccctggagctcatcaagaacaaacagcgc
aaagatccccgcttcgcacacatcatccaggagtgtgaggccagtcctcactgtaggagg
ttgcagctgaaggatctgctggtgtctgagacgcagagactcaccaagtaccctctgcta
ctggacaacatcctcaaacacaccgaggccggttccacagacctccctcctctccaacag
gctcaagcctgttgccgggggatactgcaggccgtcaacgaggtcgtcagggagacggaa
caccggcagcggctcaaccaataccagcgcaggttggaccccacgccacagttcaagagt
ctggacctgaccagtaagagaatgatccatgagggtcctctcacctggaaagtcagtaaa
gacaaaaccttggagatccaggcgctgctgttgtcagaccttctggtgttgctccagaga
ggtccagacgaccggctgctgctgcgctgcccgtcccgcttgctggggggaggaggtggg
ggtagcggggataccaaggcctctttcagccccgtggtccagctggactcactgctggtg
cgctctgtggccacagaccacaaggccctgtacgtcattagcacaacagagcaacagata
tacgagctggtagctgggacgtcctcagagaaaaacatctggaaggaccaacttgaaaag
accatctcattggctgctggctcctcacctttgaccaataacagatccacacctatttcc
tccccgagtcttggtaatgcgtcccctgtctcaactggcagtcatgtctaccaatcagac
gactcgatgacggagcaggcagtttcaatggggacaaactctcctaatgatgaggacaac
gagctcacgcccaccacaccaacggcacaatcaggggctttcctccacagtgaggggcgg
gactacggcaagaggcaaattggagtggctgaggcagctcttgaagacgtggagatgcta
aagcagctgattttccacaactttgaggaagttgggtggagtcacgactcggacggaacg
cccacaaacgagacagccaatgagaggagcccgctcaatgacagacagaggccggcgtcc
tctgagtctctcctcagtgccagtcccagccaattggaggctgagcattcagaagccccg
ccctcggaggtggggtcccccagtgtacatgttgtgaggaaagctgtggttgcgggctct
ccttctatccctgatgacatcactgatgtcaaccttcactctgaccaatcacctgagccg
agaggcggggccagtgtacggggaaacgtgttctacctggtgatgcctacagagcaggga
gacggactgctggatgagagtcacacagatgaggtcattggtccccccaccctgacctcc
actgaacttcctgatctggaccaggaagtgatgttatcaaacatacagcatcatgaggaa
gaagggcaggtctcttccaccctgtctgcgggcgaccaatcggagccagggaatccgagg
ctggaggtagggcttggccaatcacaaaaggtcctccagagccatgtgatcaaacacgtg
gatgagattttccacacaatcgaggagctgatgagcaagctgcaaaagctgagggacatc
gagacagctcatcaccagctgctgaaaacactaagagagctgcctgtcaatcaggagtca
gatgacctccctcgcaaccaggaaactgtcatcaggacgccgtctctggaccgggaccca
ggggatgcagagccagctaagcctgagatcctctccactggattctaa
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