Salmo salar (Atlantic salmon): 106609095
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Entry
106609095 CDS
T04363
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106609095
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106609095
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
106609095
NCBI-ProteinID:
XP_014062973
LinkDB
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Position
ssa07:33537461..33566561
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AA seq
1722 aa
AA seq
DB search
MLILHIASLLTLGWRTFAQMPEFGDVCTEGSCYPATGDLLIGRAHKLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREKYDERMNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYNCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGRNTNACKMCECNYHSRSCHFDMAVYLSTGNVSGGVC
DECQHNTMGRQCEQCRPFYYQHPERDLRDPNICEPCSCDPTGSLQGGVCDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLSGGSPCDMETGNCFCKR
LVTARNCDRCLPQHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCQCREHMYGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVTVVPRPYPLNHSPTWTGAGFVKVPEGAHLEFHINN
LPDSMDYDMLIRYEPQLPEQWEQVEIRVIRPYSMRVGQPVSPCDNTLQGGDQQLVSLPPG
SRHVLLPRPVCLEKERNYTVRLSLPLYSSLSDVQSPYTLIDSLVLIPRVRELLLFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICSNYIFSVSALLHQGAMACQCDSQGSLSAVCDP
SGGQCQCRPNVAGRNCDRCAPATFLFSPFGCRRCECSPTGSVNAFCHEVTGQCECVPGAT
GRQCAQCLPGYWGFPQCQPCQCNGNSDYCHPQTGECQGCRAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADSCYQTANNDQLVCVCSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCNDNIDQLDPGSCDARTGVCLTCLHHTEGYGCQRCKLGYYGNAATQSCRK
CMCYSVGTTSEACPSPGECHCDLQTGQCPCRPNVIGQNCDRCAPDTFHIGSGKGCQTCDC
DPTHSFGTSCNELSGQCSCKSGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNHCARGYHGTFPACERCHQCFAAWDGVVGELSNQTQRLKDHVTE
LQTSGVTAPYKDTVSSLEISANAISAIVENNPAIQKVEDVQQMMQQATELVADLNERLNV
SEGSLSRLVANANDTEASLDALRKQAQELERTVTDIRDHIKTVKNSNIEGAMDTITKAHL
ESKKAEIRANQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLERLATELN
TLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSEDGTLRCGGEGCDGLVTQTQSTLKTAK
DFDQEILSTVQEVDKLSRMVWEVKVRADETKLNAQEVLLKSNQSRDRVVQSNEQLRSLIK
EIRGLLTNDRANVEVIEAVSNEVLALEMPTSPEQLEALTKEIRDRVGTLTSVEDILSQSA
NDIHTAERLLEQARTASQEVSEMKETAALAKEALEMTERAQNAAVDAVKQAHNNTRGTLD
LTTSEFDLEVKGKYSVVEGLVVTKAEGVSDARKRAELLQQEAKELLTQTSVKLQRLRELE
RSYAANQRTLEAKTVQLAGLEETARQLLNDVSQKVMVYSTCS
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgttgatattgcacatcgcatcacttttgaccctcgggtggcgcacctttgcccagatg
ccggagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgcgcgcacaagctcaccgcctcctccacctgcggcattgagaagcctgagcgc
ttttgcatcgttggtcacttggaggaggagaagaagtgttttgtgtgtgactccagggag
aagtatgatgagaggatgaaccacaccaccagccacagcatcgaaaacttggtcaccacc
ttcgcccccaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacctttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttgggaagaagtggcaggtg
taccgttactatagctataactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacgacatcatctgtgactctcgctactctgacatagagccgtctgcagag
ggagaggtgatattcagggtgctggacccagcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcactaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacggagaaatattactacgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaaatgcgcccct
gtcgatgggatacatgtaggcacagagggcatggtccatggtcactgtatgtgtaaccat
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacgcaacaccaatgcctgcaagatgtgcgagtgtaactaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacaacaccatggggcgtcagtgtgagcagtgcagacccttctattac
cagcaccccgaaagagacctgagagaccccaacatctgtgaaccgtgtagctgtgacccg
acgggctccctgcagggtggtgtgtgtgatggcaggacagatgtgtctgctggtctgata
gcaggacagtgtcgctgtaagaccagtgtggagggagagcgctgcgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaatcccctg
ggcacactgtctggaggaagcccatgtgacatggagacaggaaactgcttctgcaaacgc
cttgtcaccgccaggaactgtgaccggtgtctgccgcaacactggggcctgagtaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagccgtcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccaggtg
gagtcaggattctacttcatcgccctggaccactacacctatgaggctgaggacgccaag
cacggcccaggtgtgacggtggttcccaggccctatcccctaaaccatagtcctacctgg
acaggggcagggtttgtcaaagtacctgagggagcccacctggagttccacatcaacaac
ctacctgactccatggactacgacatgctgatccgctatgaaccacagttgccggagcag
tgggagcaggtggagatcagagtgatacgtccttactcaatgagagtgggacagccagtc
agcccatgtgacaacacgctacaaggaggagatcagcagttggtgtctcttcctccagga
tccagacacgtgctgctcccgaggcctgtgtgtctggagaaggagcggaactacactgta
cgtctcagtctgcctctctactcctcgctcagtgacgtccaaagcccctacacgctcatc
gactccctggtgttgattccacgggtgcgtgagctgctgttgtttgagggttctcagggc
gagggggcgtgggatacgttccagaggtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgacggacatctgcagcaactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctctctcagtgcagtgtgcgacccc
agcggcgggcagtgccagtgtcggcccaacgtggcaggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagcccctttggatgcagacgctgtgagtgtagtcctacgggc
tctgtgaacgctttctgccatgaggtcacaggtcagtgtgagtgtgttccaggggcgaca
gggcgtcagtgtgcccagtgcctgccaggctactggggcttccctcaatgccagccctgt
cagtgcaatggcaacagcgactactgccaccctcagactggggagtgccagggctgccgc
gccttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggcgacccagtg
ttgggtttggggggtcactgccgcccctgcatgtgtcccgatgggccggggagcggacgc
cagtacgcagacagctgctaccagactgccaacaatgaccagctggtctgtgtttgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggtcactatggtaacccccag
gtgcccagcgggcgctgtctgccctgccagtgtaacgacaacatcgaccagctggacccg
gggtcctgcgacgctcgcacaggcgtttgcctcacatgcctgcaccataccgagggctat
ggctgccagcgttgcaagctgggttactacggcaacgccgccacccagagctgcaggaag
tgtatgtgttattcagtgggcacaacgtcggaggcgtgtccgtccccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaactgcgac
cgctgtgcccctgatacgttccacattggaagcggaaagggctgccagacctgtgactgt
gacccaacccactcctttgggacgtcgtgcaacgagctgtcagggcagtgctcatgcaag
tcaggtttcgggggaagaaaatgcaacgagtgccgagataagttctggggagaccctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgcgtggagggtgtgtctgggcccaggtgtaaccattgtgcc
agagggtaccatgggacgttccccgcctgcgaacgatgccaccagtgctttgccgcgtgg
gacggcgtggtaggggaactgtccaatcagactcagcgtttgaaggatcatgtgacagag
ctccagaccagtggggtgacggcgccgtacaaagacaccgttagcagtctggagatcagt
gctaatgctatcagtgcgatagtagagaacaaccctgctatacagaaggtggaagatgta
caacagatgatgcagcaggccactgagctggtggcagacctgaacgagaggctgaacgtc
tcagagggttccctgtcccgtctcgttgccaatgccaacgacaccgaggccagtctggac
gcactgagaaagcaggcccaagagctagagagaacagtcacagacattcgagaccacata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccaaggcccacttg
gagtctaagaaggcggagatccgtgccaatcagaccaccagttaccccgacaacactttg
gaacagtcggctacactacggcgtgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggctcgccacagagctcaac
actcttgacctatcagagctcagcaagcagacatgtggagcggctgggggggaggagggg
tgtgctgcgtccccctgtggaggggtggggtgtgtgtcagaggacggcacccttcgctgt
ggtggggaggggtgtgacggtttggtcacacagacacaaagcactctgaaaacagccaag
gactttgaccaggaaatcctctccaccgtgcaggaagtggacaagctctctaggatggtg
tgggaggtgaaggtgcgtgcggacgagaccaagctgaatgctcaagaggtgctgctgaag
tccaaccagagccgagacagagtggtacagagcaacgagcagctccgcagcctcatcaag
gagatacgaggcctactcactaacgaccgtgccaacgtggaggttattgaagcggtgtca
aatgaggtgttggccctggagatgcccacatcgcccgagcagctggaggccctgaccaag
gagatcagagacagggtgggaaccctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactgcagagaggctgctggagcaggcccgcaccgccagtcaggaggtg
tctgagatgaaggagacagctgccctggcgaaggaagctctggaaatgactgagcgtgct
cagaatgctgccgtcgatgccgtcaaacaggcccacaacaacaccaggggaacacttgac
ctcaccacatctgagtttgacttggaggtgaagggtaaatacagtgttgtggagggcttg
gtggtgacgaaggcagagggcgtgtctgatgccaggaagagggcggagctactgcagcag
gaggccaaagagctgctcacccagaccagtgtaaaactacagagactcagagagttggag
aggtcgtatgcagccaaccagcgtactctggaggccaagacagttcagctggccgggctg
gaggaaacggcacgccagctgctcaatgacgtcagccagaaagtaatggtctacagcacc
tgttcttag
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integrated database retrieval system