Salmo salar (Atlantic salmon): 106609308
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Entry
106609308 CDS
T04363
Name
(RefSeq) transmembrane and TPR repeat-containing protein 1-like
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106609308
Glycosyltransferases [BR:
sasa01003
]
O-Glycan biosynthesis
O-linked Man type
106609308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_11
TPR_17
TPR_8
TPR_14
TPR_12
TPR_19
TMTC_DUF1736
TPR_10
TPR_7
TPR_CcmH_CycH
TPR_15
TPR_Slam
FAT
ANAPC3
TPR_9
TPR_6
TPR-S
ARM_TT21_C
HAT_PRP39_C
DUF7017
ARM_TT21_5th
TPR_5
ARM_TT21_2nd
ARM_TT21_N
HAT_PRP39_N
TPR_MalT
TPR_3
ARM_TT21
Suf
Mad3_BUB1_I
Wzy_C_2
NatA_aux_su
RPN6_N
SNAP
PknG_TPR
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
106609308
NCBI-ProteinID:
XP_014063452
UniProt:
A0A1S3SGI6
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Position
ssa07:38344410..38431915
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AA seq
866 aa
AA seq
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MTVHGREKTPGRLRLSVPLEAGKGAGRYAVLLALCALCYSNSLHGEFVHDDVWAISNNPD
VRPGSSLQSIFSNDFWGKRMADNTSHKSYRPLCILTFKLNILLGGMTPIYFHVVNVCLHC
AVTCLLMHTCDRCVFDDPRLAFLTALLFAVHPIHTEAVSGIVGRADVLACMLFLLAFLSY
IRSVGECDSADCLPSTVSVWALGASLLLGTCAMLVKETGITVFGVCVFYDALVLCRKPLL
LHLSSSKMKDLLRISVPFLKRACAVSLYVAIIMSFRLWLMGGSMPLFSEQDNPASFSPHL
LTRFLTYCYLLAFNAWMLLSPAVLCYDWQVGSIPLVESLWDMRNVAALLLGVVMVALCLH
CVMSLQRLENREVLLGVLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILVAHGLGR
LCSVVGRWGTTALTVSTLLLLLLFSWKTVQQNDIWLSREALFRSGIQTLPHNAKVHYNYA
NFLKDRGRHQEAIHHYKTALRLCPRHASAMNNLGTLTRHPEDAEHYYRTALDTNPQHNRA
LFNLGNLLKSQGKKEEAEALLRDSIRFGPHFADAYSSLASLYAEQKRFAEANEVYLQGIE
SCPDSSDLHNNYGVFLVDTGEGDLAAAHYQHAVRLKPSHYVAMVNLGRLLRSSSENKEAE
SWYKKALQVTRKVDILTPLGALYYNTGRYEEALQVYREAATLQPDSTDIWLALAQVLAMA
GRSKEAEKMTLGIISKQGSCIECYRLLSAIYSKRGNYTEALDALDKALLQNPIDVSVRAE
LHFSKGNQLREMNQLDRAFESYKLVVELKPDQSQAWMNMGGIQHIKGDYAAARQYYQRAL
ILTPGSKLLKENLAKLDRLERRLTGA
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgacagtacacggacgagagaagacccctggccggctccgcctgtcggtcccgttagaa
gcgggaaaaggagcgggtcgctatgccgtgttgctggctctgtgcgcgctgtgctacagc
aactctctgcacggggagttcgtgcacgacgatgtgtgggctatcagcaataaccccgac
gtccggcccgggtccagcctgcagagcatcttctccaacgacttttggggcaagaggatg
gcggacaacacaagccacaagtcctacagaccgttatgcatcctcaccttcaaattgaac
atcctcttgggtggaatgaccccaatctacttccatgtggtcaacgtgtgtcttcactgt
gccgtgacctgtctgctcatgcacacgtgtgatcgttgcgtgttcgacgacccccgcctg
gccttcctcaccgccctcctcttcgcggtgcaccccatacacactgaggctgtgtctggt
atcgtgggcagggcagatgtcttggcctgcatgctgttcctcctggcctttctctcctat
attaggagtgtgggtgagtgtgattctgcagactgtctgccctccactgtgtctgtgtgg
gcgctgggtgccagtctgctgctgggcacctgtgccatgctggtcaaggagacgggcatc
accgtcttcggggtgtgtgtgttctacgacgccctggtgctctgccgcaagcccctcctc
ttgcacctctccagctccaagatgaaggatcttctcagaatctccgtccctttcctcaaa
cgagcctgtgccgtctctctctatgtggcgatcatcatgtccttcaggctctggctgatg
ggcggctccatgcctctcttctcggagcaggacaacccagcctccttctctcctcacctg
ctcaccaggttcctgacctactgctacctgttggcgttcaacgcgtggatgctgctgtct
cccgcagtgctgtgttatgactggcaggtgggcagtatacccctggtggagtcactgtgg
gacatgcgcaacgtcgccgccctgctgctgggagtggtcatggtcgccctctgtctgcac
tgtgtcatgtcgctacagaggttggagaatagggaggtgttgctgggggtgttgttcctg
gtctttcccttcatcccggccagtaacctcttcttcagagtgggcttcgtggtggcagag
agggtcctctacatgcccagtatgggttactgtatcctggtggcccatggcctggggagg
ttgtgttctgtggtgggtcgctggggcaccacggccctgaccgtctccacgctgctgctc
ctcctgctcttctcctggaagaccgttcagcagaacgacatctggctgtcccgggaggcc
ctcttcaggtctggcatccagacgttgcctcacaacgccaaggttcactacaactacgcc
aacttcctgaaagacagagggcgccaccaagaggccatccaccactacaaaactgctctc
aggttgtgccctcgccatgccagtgccatgaacaacctgggtactctgacacgccaccca
gaggatgccgagcactactacaggaccgccctggacaccaacccccagcacaacagagcc
ctgttcaacctgggaaacctgctcaagtcccaagggaagaaggaagaggcagaggctctg
ttgagagactccattcggttcggtccacacttcgctgacgcctactccagtctagcatca
ctttatgcagagcagaagcggtttgcggaggccaatgaagtttatcttcaaggcatagag
agctgcccggacagctcggacctgcacaataactacggtgtgtttctggtcgataccgga
gaaggggatctggcggcagcccactaccagcatgccgtgcgtctcaagccgtcgcactac
gtcgccatggtaaacttgggccgcctccttcgctcctccagtgagaacaaggaggcggag
tcttggtataaaaaagccctgcaggtgacgaggaaggtggacatcctgacgccactaggg
gcgctgtactacaacacaggacgctatgaggaggctctgcaggtgtaccgcgaggcggct
acgctacagccagacagcaccgatatctggctggctctggcacaagtgttagccatggca
ggccgctctaaagaggcagagaagatgactctgggcatcatatcgaagcaggggagctgc
atcgagtgttaccgcctactgtctgccatctacagcaaacggggcaactacacagaggct
ctggatgctctagacaaggccctactgcagaaccccatagacgtgtctgtcagggcagag
cttcacttctccaagggcaaccagctcagagagatgaaccagctggacagagccttcgag
agctacaagctggtagtggaactaaagcctgaccaatcgcaggcttggatgaacatggga
ggaattcaacatatcaagggagactatgcagcagccaggcagtactaccagagggccctg
atcctaacccctggctccaagctgctaaaggagaacctggccaagttggaccggctggag
aggaggctgaccggggcctag
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