Salmo salar (Atlantic salmon): 106609338
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Entry
106609338 CDS
T04363
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106609338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106609338
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106609338
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Retinal
Motif
Other DBs
NCBI-GeneID:
106609338
NCBI-ProteinID:
XP_014063516
UniProt:
A0A1S3SGP8
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All DBs
Position
ssa01:complement(74204335..74211079)
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AA seq
562 aa
AA seq
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MASDDISLLAEALSKTHVGYGELSYKGQGLKLDNTESVKELVREIEEYQGLRALRLEGNT
VGVEAAQAIAKALECKDQLQSCHWSDMFTGRLRSEIPTALRSLGSALMTAGARLRELDLS
DNAFGPDGVKGIETLLKSSVCHSLQELRLNNCGMGIGGGKILAAALTECHEQSSALGAPL
KLKVFIAGRNRLENEGATALALAFQLMGSLEEVHMPQNGINHAGVTALATALQHNPQLRI
LNLNDNTFTKRGALAMAQALRHLRTVQVINFGDCLVRSEGAIALSAVLREGLPTLKELNL
SFGEITEAAALVLAQAVQDKPHMEKLDLNGNCLGEEGCEALKETMDNMDRADILASLSDD
EGEPDEEEEEEEEDEENGKEMKENGVKDKRDSPVKPEPTCHPEILSFLSSPTAETLLKLG
DNRTGLIQQHVDVSDSDKVADAFLRISSLYSDDHEVKKAVLETIDTLLKKAFSGSSLQTY
SFLSTLLVMLGLLKGEGKVKKVQVLPGHLLVLEHAVQQDYFPQDHASLLDTFVARHGKAL
KSCSHARDSLKSTLERRISPEC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatgacatttccctgctggccgaagcgctgtccaagacccatgtaggatat
ggagagttgagctacaagggccagggactgaagctggacaacacagagtctgtgaaggag
ttggtgcgggaaatagaggagtaccagggactccgggccctgcggttggagggaaacaca
gtgggagtggaggcagcgcaggctatcgccaaagccttggagtgcaaagaccaacttcag
agttgccactggagtgatatgttcacgggtcgcttgcgctcggaaattccaactgccctg
aggtccctaggcagtgcgttgatgacagcaggggccagactgcgagagcttgacctgagt
gataacgcctttgggccagatggggtgaagggcattgagactctactgaagagctctgtg
tgtcactctctacaggagctgagactcaacaactgtggcatgggcatcggagggggcaag
atcctggcggcagcgttgactgagtgtcatgaacagtccagtgctctcggtgccccactg
aaactgaaagtgttcatcgcaggcagaaaccgcttggagaacgaaggagccacagccctt
gccctggcatttcagctgatgggaagcctagaggaggtgcacatgccccagaatgggatc
aaccatgctggggtgactgctctggccactgccttgcagcacaacccccagctgcgcatc
ctcaacctcaacgacaacaccttcaccaagagaggggcgttggctatggctcaggctctg
aggcacctgaggactgtgcaggtgatcaactttggggactgcctggtgcgttctgaaggg
gccatcgctctctctgctgtcctgagagagggacttcccactcttaaggagctgaatctg
tcctttggggagatcacggaagctgcagcactggtgttggctcaggctgtacaagacaaa
ccccatatggaaaaactggatctcaatggtaactgtttgggggaggaggggtgtgaggct
ctgaaggagaccatggacaacatggacagggccgacatactggcgtctctcagtgatgat
gagggagagcctgatgaagaagaggaggaggaggaagaagatgaggagaatgggaaagag
atgaaggagaatggagtgaaggataaaagagacagcccagtgaaacctgagccaacttgt
catccagagatcctctctttcctcagctcccctactgctgagacactgctcaaactgggg
gacaacaggactggactcatccagcaacacgtggatgtgtctgactctgataaggttgcc
gatgccttcctgagaatctcctctctgtacagtgatgaccatgaggtcaagaaggctgtc
ctggagactattgacaccctgttgaagaaggcattctctggttcctccctgcagacctac
agcttcctgtcaactctactggtgatgctggggctcctcaagggtgagggcaaggtgaag
aaggtgcaggtgttacctggtcacctgttggttttggagcacgctgtccaacaggactac
ttcccccaggaccacgcctccctgctggacacctttgtcgccaggcacggtaaagccctg
aagtcctgcagccatgcccgagatagtctcaagtccacactggagagaaggatctccccg
gaatgctga
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