Salmo salar (Atlantic salmon): 106609776
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Entry
106609776 CDS
T04363
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106609776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sasa04030
]
106609776
G protein-coupled receptors [BR:
sasa04030
]
Frizzled / Smoothened family
106609776
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
106609776
NCBI-ProteinID:
XP_014064264
UniProt:
A0A1S3SIU6
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Position
ssa07:55331670..55365516
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AA seq
832 aa
AA seq
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MSSHGWSSIVGGFGMLCVWAASFLVTHAVTVQRNETIFNDFCKKTTTCEVLKYNTCLGSP
LPYTHTSLVLAEDSSTQDEAFEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCDNGQVELP
SQHLCQATRRPCSIVDQERGWPNFLKCEETDKYPMGCTNEVQKLKFNTSGQCEAPLVKTD
VQASWYKDVEGCGIQCNNPLFTDEEHSDMHAYIAVFGTVTLLCTFFTLATFLADWKNSNR
YPAVILFYINTCFFMGSIGWLAQFMDGARKEIVCKSDNTMRLGEPSSTETLSCVIIFSLV
YYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHMVTWSVPFILTVAILATAEV
DGDSVSGICFVGYKNYHYRAGFVLAPIGVVLVIGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVLITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECTIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKVIGRSDDEPK
RIKKSKMIAKAFSKRKELHKDPEKELSFSMHTVSHDGPVAGINFDLNGEPSNEMSSAWAQ
HVTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMMKRKKKRKKRKKE
ARPLEELAEHQGYRRREFGTSSVPRLPKLPGHRSLVANLRQHQEEAEDVLPGSYPEFRPS
HPLPDQERYGGALGASSSQRSRYPDLNPLSLSDLPEDLGLGPRCRPQQPPPSFWQPNGAF
HYSGEVAPMAGVSGRTDHVGRSQGGQRRAEWGQIHSRTNLMEAELMDADSDF
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccatggctggagttccattgttggtgggttcgggatgctttgcgtttgggct
gcctcctttctggttactcatgcggtaacggtccagagaaacgaaacaattttcaatgat
ttctgcaagaaaactacaacatgtgaagtgcttaaatataatacatgtcttgggtcacca
ctaccgtacacgcacacgtctcttgtcttggctgaagactcaagtacccaagacgaagca
tttgagaagttggccatgtggtctggtctgaggaacgcccctcgctgctgggcggtcatc
cagcccctgctgtgtgcagtctacatgcccaagtgtgacaacgggcaggtggagcttccc
agccagcatctgtgccaggctacacgtcgcccctgcagcatcgtggaccaggagaggggc
tggcccaacttcctcaagtgtgaggagacggacaagtaccccatgggctgcacgaacgag
gtgcagaagctgaagttcaacacgtcgggacagtgcgaagcccccctggtgaagacagac
gttcaggccagctggtacaaagatgtggagggctgcggcatccagtgcaacaaccctctg
ttcaccgacgaggagcactcggacatgcacgcctacatcgctgtgttcggcaccgtcacc
ctgctctgcacctttttcactctggccacctttctggcggactggaagaattcaaaccgt
taccctgccgtcatcctcttctacatcaatacctgtttcttcatgggcagtatcggctgg
ctggctcagttcatggatggagctcgcaaagagatcgtgtgtaagagtgacaacaccatg
cgtttaggggagccctcgtctaccgagactctgtcgtgtgtcatcatcttcagcctcgtc
tactactccctgatgtctggggtgatctggttcgtcatgctgacctacgcctggcacacg
tccttcaaggccctgggcaccacccaccagcccctgtcgggcaagacctcatacttccac
atggtcacatggtccgtccccttcatcctcactgtggctattctagccaccgctgaggtg
gacggagactctgtcagtgggatctgtttcgtgggctataagaactaccactaccgtgct
ggctttgtgttggctcccattggagttgtgcttgtcattggtggctatttcctcatacga
ggagtcatgacgttgttttccatcaagagtaaccacccgggtcttctgagtgagaaggca
gcgagcaaaatcaacgaaacaatgctaagacttggtatatttgggttcctggcgtttggc
tttgtcttaatcacgtttggctgccacttctacgacttcttcaaccaggctgagtgggag
aagagcttcagagaatatgtgttgtgtgaggccaatgtgacgatcgctcatcagaccaac
aagccgatcccagaatgtactatcaagaaccgtcccagtctactggtggaaaagattaat
ctgttctccatgttcggcacgggcatcgccatgagcacctgggtgtggaccaaggccact
atcctcatctggaaacgcacctggtgcaaggttatcggccgtagcgacgatgagcccaag
aggataaagaagagcaagatgatagccaaggccttctccaagcgcaaggagctccacaaa
gacccagagaaggagctgtccttcagcatgcacacggtctcccatgatgggccagtagct
ggcatcaactttgacctgaacggggagccatccaacgagatgtcttcagcctgggcccag
catgtgaccaagatggtggccaggaggggcgccattctgccgcaggacatctctgtcacc
cctacagggacacctgttccacccccagaagagaggaacaagctgtggatggtggaggcg
gagatctcccctgagatgatgatgaagaggaagaagaagaggaagaagaggaagaaggag
gcacgtcctctggaggagctggccgaacaccagggctaccgtcggcgagagtttggcacc
agctcggtgccacggctacccaagctgcccggccacaggagcctggtggccaatctgagg
cagcaccaggaggaggctgaggacgtccttccaggctcttaccctgagtttaggccctct
catccgctgcctgaccaagagaggtacggaggagccctgggggcctcctctagccagagg
agcaggtaccctgacctcaaccccctctccctcagtgacctgccagaggacctcggcctg
gggcctcgctgccgcccccaacaaccacccccctccttctggcagcccaatggagcgttc
cactactccggggaggtggcgcctatggcaggggtgtctgggaggacagaccacgtgggg
aggtcgcaggggggtcaaaggagggcggagtgggggcagatccactctagaaccaacctg
atggaggcggagcttatggatgctgactctgacttctga
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