Salmo salar (Atlantic salmon): 106609792
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Entry
106609792 CDS
T04363
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106609792
Enzymes [BR:
sasa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
106609792
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106609792
Prokaryotic type
106609792
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Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
106609792
NCBI-ProteinID:
XP_014064283
UniProt:
A0A1S3SIW6
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Position
ssa07:56049824..56077373
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AA seq
558 aa
AA seq
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MTMKEEAPSVPECYISEHEGFYGTIKNSTRDFVVTEIDIHGQMVTKPSVSDVPQSSNITE
ACPGAKSEGKTNIISPKHQHNLKEENCPPVVKDVDSEPGPGQNGDITSTASQDCFDLRMI
LGQVVCEELEQFTALLREVSSSPNDGVEKNLANQESSNGSEKKMANQELSLGSFPDKHQR
ANVHRAVRHNFPFLLTVTNQSEIRVKEDPAFKLLSGLVSEEEAEDFIRFIDTKMPNSVYT
FRGDDSKEHRTAVHHFLSRRFGKLVETKSFSDQQQKTTAITVRLREKGKPRKRTADESKD
EEVYTAFTLRKESQETLEAISYMAAVLGVLPSDFTYAGIKDKRAVTYQSMVVKKISPQRL
REKTSEFEKRGVVLSSIRSVSEPLHLGRLQGNHFDLVVRDLRPHQGHGTLMELDSLVQEA
VENVQVKGFVNYYGPQRFGTGQSVQSDCVGLALLKEEMVAAVRLFFTPEEGDDSQNVAKR
HFLQTGEKFLFTLVTISCLPCSLFLWSPTTTVPLPTIKDPRWVSTVHGTLRVLARVGVHC
PWDAESASQGGCPLPMGR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaggaggaagcaccgagtgtccctgagtgttacatctcagaacatgaaggg
ttctatggaaccatcaagaactccaccagagactttgtagtcacagagatagacatccat
ggccagatggtcactaaacccagtgtatctgatgttcctcaatcatccaacattactgag
gcatgcccaggtgccaagtctgaaggaaagacaaatattattagcccaaaacatcaacac
aacctcaaagaagagaattgtcctccggttgtaaaggatgtggattcagaacctggaccc
ggtcagaatggtgacatcacatccaccgccagccaagactgttttgacctgagaatgata
ctgggtcaggttgtctgtgaagagctagagcagttcactgctttattgagagaggtgtca
tcaagtcccaatgatggcgttgagaagaatctggccaaccaagaatcatccaatggcagt
gagaagaagatggccaatcaagagttgtccctgggttcattcccagacaaacaccaaaga
gctaacgttcaccgtgctgtccgacacaactttcccttcctgttgacagtaaccaaccaa
tcagagatcagggttaaggaggaccctgcctttaagctcctatcaggtttggtctctgag
gaggaggccgaagactttatcaggttcatcgacaccaagatgcctaactctgtgtacacg
ttcaggggtgatgacagtaaggagcacaggacggcagtgcaccacttcctcagtagacgg
tttggtaaactggtggagaccaagagcttcagtgaccagcagcagaagactacagccatt
acggtgaggttgagagaaaaagggaaacccaggaagaggacggctgatgagagtaaagat
gaagaggtctatacagcgttcactctgaggaaggagagccaagagactctggaggctatc
agctacatggcagctgtcctgggggtgctgccctctgacttcacctacgctggcatcaag
gacaagagggccgtcacctaccagtccatggtggtgaagaagatctcaccacaacggctg
agagagaagaccagtgagtttgagaagaggggggtggtcctctcctccatccgctccgtc
tctgagcctcttcatctgggtagactccaggggaaccactttgacctggtggtacgggat
ctgagaccacaccagggtcatggcacactgatggagctggactcactggtgcaggaggct
gtggagaacgtacaggtcaaggggtttgtgaactactatggacctcagaggtttgggact
ggacagagtgttcagtctgactgcgtcggactggccctgctcaaagaggaaatggtggca
gctgtccgtctgttcttcacaccagaagagggtgatgactctcagaacgttgccaagaga
cacttcctccagactggtgagaaattcctgtttacactagtcaccatttcctgtttacca
tgttctctgtttttatggtctccaacaactacagtcccactgcccaccatcaaagaccca
aggtgggtgtccactgtccatgggacgctgagagtgctagccagggtgggtgtccactgt
ccatgggacgctgagagtgctagccagggtgggtgtccactgcccatgggacgctga
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