Salmo salar (Atlantic salmon): 106610324
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Entry
106610324 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106610324
03036 Chromosome and associated proteins [BR:
sasa03036
]
106610324
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106610324
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106610324
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106610324
UBL E3 ligases
106610324
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106610324
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106610324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-ANAPC11
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
106610324
NCBI-ProteinID:
XP_014065085
UniProt:
A0A1S3SL55
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All DBs
Position
ssa08:complement(18979492..18983420)
Genome browser
AA seq
908 aa
AA seq
DB search
MAAAKMTLRLLKKSAPDKTSEVLSAEASPDSKCPICLDRFNNMSYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHSIQSEKDFKKYDLRPTENGSFGSFAGERFRYRTTLTGARR
QDQRRTSPPPDNGVMFEALTGASPPPRQDQGLRRMMERLAARRRAESEGRTVRSLREQEM
IKFRRALYRRGVRVRSVRDGGRSRDISAEFFQRNPACLHRLLPWLKRELVVLYGAHGSLV
NIVQHIIMSRITRYDMEDRAIQEELQPFLQARTDHFLHEFVNFARAPFNMEAYDQHAVYD
CPAPSSDEGSSSNSSVIAISEDEEGGDSVELDPVSGVALSQSTWDDETPGPSYSTTEPTR
ALLLSIRDSDSESSLGEECGAVSQPKAPRLTAGSARVKTDKDGPACTSSGDEDCIIVGFV
KPLAERTPELVKLSSDSEESVLEESKDEVPRLLQHIRFTSLSPASSQGQCPGRAEGMERE
QDVSCSKERRNTSPSIRRETSSKSTSKNSGQTEKDGRRCQSRDRSRERPRSRSRDQRRRS
RSADRSRSTKSPAISINSDSTLSRGRRQSRSQSRDRSHTKGEKKRDNKDGSRSGHSHDSS
SHSYHWHYYSRESERDSSATLYTERRTYYSSSHRNIDCRSPSQSQSPDSHRRDKRRSRSR
SSTCSPSGAHRKSRHEKPSGKRKYKSRHLEEPDPKDKSSNALDEPPSSTTSSCAKDKKKK
KRSKEKRHRKSKEKSGGKRSRSLSVEIIYEGSSSEQTRKHQKKKKKHKKKGKRHRSKERT
GSGKHSPTVITIDSDSDQHTAAGANDANHTCPVSSSTSNYVLLPSTTTTTGNPADSGLLE
SMLQDWEQQIPPVGLDSGVLEVKPPVTAAATTDTPTHSEGVLSQSASADEVNSRSPSNDN
TSHFLEES
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaagatgaccttacggctactcaagaagagtgccccggacaagacctct
gaggttttgtctgccgaggcgtctccagactctaaatgccccatctgtctggaccgattc
aacaacatgtcctacctcgatctctgcttgcacaagttctgcttccgctgcatccacgag
tggtccaagaacaaagccgagtgcccgctatgcaagcagccattcaactctatctatcac
agtatacaatcagagaaggacttcaagaagtatgacctgcggcccacggagaacggttcc
tttgggagtttcgcaggggaacggttccgctaccgcaccacgctgacgggggcgcgtcgg
caggaccagagaaggacatcccctccccccgacaacggggtcatgttcgaggccctaacg
ggggcttccccccctcctcggcaggaccaaggcctccgtcgcatgatggagcgcctggcg
gccagaaggcgggcagaaagcgagggccggaccgtgcgcagcctccgtgagcaggagatg
atcaagttcagacgggcgctctaccggcgaggggtgcgagtgcggagcgtgcgggacggc
ggccgttcccgggacatctcggctgagttcttccagaggaacccggcctgcctgcaccgc
ctgttgccctggctgaagagagagctggtggtgctgtacggtgctcacggctccctggtc
aacattgtgcagcacatcatcatgtcccgcatcacccgctatgacatggaggaccgggcc
atccaggaggagctgcagcccttcctccaggcccgcaccgatcactttctgcacgagttt
gtcaacttcgcccgagcacccttcaacatggaagcctacgaccagcatgccgtctacgac
tgccctgcgccgtcctcggacgagggcagcagctccaactcctcagtgatcgccatctcc
gaggatgaggaggggggcgattctgtggagctggaccccgtgtccggggttgccctgagc
cagtcaacatgggacgacgagacgcccggaccttcgtactccacaacagaacccaccagg
gccctgctgctatcaatcagagactcagactcggagagcagtttgggggaggagtgcgga
gcagtgtcacagccaaaggcccctcgcctgactgcaggctctgctcgggtgaaaaccgac
aaggatggaccggcgtgtacctcctctggtgatgaggattgcatcatcgtgggctttgta
aaacccctagctgaaaggactccagagctggtcaagctgtcctctgactcagaggagtct
gttctggaggagagcaaagacgaagtgcccaggctgcttcaacacatccgcttcaccagc
cttagccccgcctcctctcaaggccaatgtcctgggagggcagaggggatggaaagggag
caagatgtatcgtgctccaaggagagacgtaacacctcaccctcaattagacgtgagaca
tccagtaagtcaacaagcaaaaacagcggacaaactgagaaagacggcaggagatgtcaa
agtcgcgatagatctagagagaggccacggtcgagaagcagagaccagaggaggaggtcc
aggagcgccgatcgcagccgctcgaccaagagcccggccatctccatcaacagcgacagc
actctgtccagaggcaggaggcagtcgcgctcccaaagccgcgaccgctcccacactaaa
ggagagaagaagagggacaataaagatggcagccgatcaggccacagccacgactcatcg
tcgcactcctatcactggcactattacagccgggagagtgagagggacagcagcgccaca
ctctacacagagaggaggacctactactccagctcacacaggaacatcgattgcaggtcc
ccatcccagagccagagtcctgattcccaccggcgggataagaggcgctccagaagtcgt
tccagcacgtgttcgccatccggtgctcacaggaagtctcgtcacgagaagcccagcggg
aagagaaagtacaaatcgagacacctggaggaacctgaccccaaagacaagtcctccaac
gcccttgacgagcctccctcctccaccacctcgtcctgtgcgaaagacaagaagaagaag
aagaggagcaaagagaagcgtcacaggaagtccaaggagaagtcgggggggaaaaggagc
aggagcctcagcgtggagatcatctatgagggcagctcctcagagcaaaccaggaagcac
cagaagaagaagaagaagcacaagaagaagggcaagaggcacaggagcaaagagcgcaca
gggtccgggaaacactcgcccactgtcatcaccatagacagcgacagtgaccaacatact
gccgcaggcgctaacgatgctaaccacacctgcccggtaagtagcagcactagcaactac
gtgctattacctagcacaaccaccaccacaggcaaccctgcagactctggcctgctggag
tccatgttacaagactgggaacagcagattccacctgtgggtctggacagtggagtgttg
gaggtcaagcctcctgtaactgctgctgctactactgacacacccacacatagtgagggg
gttctgtcccaatctgcctctgcggatgaggtgaactctcgtagcccttcaaatgacaac
acaagtcattttttggaagaatcataa
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