Salmo salar (Atlantic salmon): 106610697
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Entry
106610697 CDS
T04363
Name
(RefSeq) transcription factor SOX-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106610697
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106610697
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106610697
NCBI-ProteinID:
XP_014065663
UniProt:
A0A1S3SMU1
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Position
ssa09:10225230..10227826
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AA seq
357 aa
AA seq
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MVQHTDNSETEGTMSREATDSEESEFIACSPVQINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKLSAPFPEKSSSKMAKTPGKKCSKIKAKTQSKSSHSYGDDRVFPKVTKTVKSEL
TDDDDADEYEEAYGMRIKQEDEEQMRLYNVAKVPASPTLSSSAESEGTSMYEEVRNAAPN
RLFYNFKNITKQSTMYPASVSPASSRSVSTSSSSSEDADDLLFDFSLNFAPSAHGQELGN
TNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacaccgacaacagcgagacggagggcaccatgtccagggaggctaccgat
tccgaggagagtgaatttattgcttgcagccccgtgcagataaacccagactggtgcaag
acagcaaccggtcatataaagagacctatgaatgcatttatggtttggtctaaaattgaa
agaagaaagatcatggagcagtctccggacatgcataacgcagagatttccaaaaggctg
ggaaagcgatggaagatgctaaaggacagtgaaaagattcccttcatcagggaagcagag
agactcaggttaaaacacatggctgattatcccgattataagtatagacccaagaaaaag
ccaaagctcgacagttcaaaactatcagcaccatttccagagaaatctagcagcaaaatg
gcaaagactcccggtaagaaatgctcaaaaataaaggctaagacccaatctaaatcgtct
cacagctacggagatgaccgtgtgttccccaaagttacaaagacggttaaaagtgaactc
acagatgatgatgacgcggatgaatacgaggaggcctatggtatgcggattaaacaggag
gacgaggagcagatgaggctgtataatgtagcaaaagttcccgcgagcccaactttgagc
tcctcggctgagtccgaggggaccagcatgtatgaagaagtacggaatgcggcaccgaac
agactgttttacaatttcaaaaacattactaagcagagcacaatgtaccctgcttccgtc
tcaccagcatcttctaggtcagtttccacatcttccagttccagtgaggacgcggacgac
ttgctttttgacttcagtttaaatttcgcccccagcgctcacgggcaggagctgggaaac
acgaattcaggaaatctttccctctctcttgtggataaagatttggactctttcagcgag
ggcagtctgggctctcactttgaatttccagactattgcacaccagagctcagtgaaatg
atagcaggggactggttggaggcgaacttttctgacttggtgttcacatactaa
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