Salmo salar (Atlantic salmon): 106610811
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Entry
106610811 CDS
T04363
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
sasa03083
Polycomb repressive complex
sasa04110
Cell cycle
sasa04330
Notch signaling pathway
sasa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106610811
03083 Polycomb repressive complex
106610811
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106610811
04350 TGF-beta signaling pathway
106610811
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106610811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106610811
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106610811
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
106610811
HDAC complexes
Sin3A-HDAC complex
106610811
BRAF-HDAC complex
106610811
REST complex
106610811
SHIP complex
106610811
MiDAC complex
106610811
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106610811
Heterochromatin formation proteins
Other heterochromatin formation proteins
106610811
Chromatin remodeling factors
NuRD complex
106610811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
106610811
NCBI-ProteinID:
XP_014065888
UniProt:
A0A1S3SNH0
LinkDB
All DBs
Position
ssa09:complement(17048663..17064754)
Genome browser
AA seq
497 aa
AA seq
DB search
MALSSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACDEE
FSDSEDEAEGQGGGRRNAASFKKAKRTKTEEDKEGEEKKAGDEKKADEKKDVKEEKVPDE
EKMDTSTKGPKEETKTP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagttctcaaggaacaaagaaaaaagtttgctactattatgatggtgatgtt
gggaattactactatggccagggccaccccatgaagccacaccgtatacgcatgacacac
aacctcttgctgaactacggtctctacagaaagatggagatataccgacctcacaaagcc
aatggagaggagatgaccaagtaccacagtgatgactacatcaagttcctgcgttccatt
cgtccagacaacatgtcagagtacagcaaacagatgcagagatttaacgttggagaggat
tgccctgtgtttgatggcctgtttgagttctgccagctctcaacaggaggctctgttgct
ggagctgtgaagctaaacaaacagcagacagacattgccattaactgggccggaggcctc
catcacgccaagaagtctgaggcgtcaggtttctgctatgtgaatgacattgtgctcgcc
attctggagttactgaaataccaccagagagtcctgtacatagacattgatatccaccat
ggagatggagtggaggaggcgttttacaccacagacagggtcatgaccgtgtccttccac
aagtatggagagtacttccccggcaccggagacctgagggatattggcgccgggaaggga
aagtactatgctgtgaattaccctctgagagatggtatagacgacgagtcttacgaagcc
atattcaaacctatcatggctaaggtgatggagatgtaccagcctagtgcagtggttctt
cagtgtggagccgactccctctcaggagacaggcttggctgctttaacctcaccatcaaa
ggccatgctaagtgtgtggagtacatgaagagcttcaacctgcccctgctgatgctgggt
ggtggaggctacaccatccgcaacgtggcccgctgctggacctatgagacagccgtggcc
ctggacagctccatacccaatgagcttccatacaatgattactttgagtactttgggccg
gacttcaaactgcacatcagcccctctaacatgaccaaccagaacaccaacgactacctg
gagaagatcaagcagcgtctgtttgagaacctgcgcatgctgccccatgccccgggtgtt
cagatgcaggccatcccagaagacgctgtgcaggaggacagtggagacgaggaggaggaa
gaccctaacaaacgcatctccatccgtgcccacgataagaggatagcatgtgacgaggag
ttctctgactctgaggacgaggctgagggtcaagggggcggacgcagaaatgcagccagc
ttcaagaaggccaagagaaccaagactgaggaagacaaagagggtgaggagaagaaagca
ggtgatgaaaagaaagctgatgagaagaaagacgtaaaagaagaaaaggtgccagatgag
gagaaaatggacacctccacaaaggggccaaaagaggagaccaagacaccgtga
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