Salmo salar (Atlantic salmon): 106611380
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Entry
106611380 CDS
T04363
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04141
Protein processing in endoplasmic reticulum
sasa04210
Apoptosis
sasa04217
Necroptosis
sasa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106611380
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106611380
04217 Necroptosis
106611380
04218 Cellular senescence
106611380
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106611380
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
106611380
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C2: calpain family
106611380
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
MgtE_N
Sec_GG
Motif
Other DBs
NCBI-GeneID:
106611380
NCBI-ProteinID:
XP_014067017
UniProt:
A0A1S3SRP5
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Position
ssa09:43853914..43878741
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AA seq
698 aa
AA seq
DB search
MPPPGVCMSIMQERNKQEGVGSLANPEKHSNQDFQQLTQYCLARGVRYIDEMFPPDHNSI
GDGLLTPNDMSRVVWLRPAKMIQNPDFILDGLSRFDFGQGMVGDCWFLASIGSLTFQKDI
LEQVVPLNQSFKEDYCGIFHFRFWRFGRWVDVVIDDKLPTVDGNLIFVHSKTPNEFWPAL
LEKAYAKVCGSYTDMNLGTPSEAMMDFTGGVHITFKLTDAPSNLWDLLFRAVQSKSLMGC
NTPKGETSANTVAPNGLVRGHAYTVTGVKQIMSQGRPVNLIRLFNPWGRGEWKGDWSDKS
SMWQTVSPNDRKMCLSVKEDGEFWMTMEDFCKHFTDVTICCMCPDFLDGNSKGLWTHSIH
DGRWVAGTTAGGCMNFPNSFWTNPQYRVKIEGLDRDCSETQGDNNTLVSLMQKPDKRNRR
LVKSLYIGINIFEVPSQFKGQRGKFPADFFNTNVPVAQTKNLLNARTVVLLSRLKPGEYL
IVPSSFNPNETASFILSILSKVETQIHENSNDQDIVEISKPMPTHNRADMDSKQTMFRQY
SDQFEEVDAEQLQRILNETLLQGYAKKTQGFSLESCRSMVALMDTSITGKLNSAEFQHLW
RKVTVYKDIFLRSDVNHSGMLSLSQLRNAVTASGVRLSDSLLNLIALRYGGSSGNISLES
FISLVLRMDRMAKIFRQLNQGGAISLRDNEWMYITMYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccggtgtgtgtatgagtataatgcaggagcgcaacaagcaagagggtgtt
gggagtcttgccaacccagagaaacacagcaaccaagactttcagcagctgacgcaatac
tgtttggccaggggagtgaggtacatcgatgagatgttccccccagaccataactccatt
ggtgatgggctacttacccctaatgacatgagcagagtggtgtggttgagaccagcgaaa
atgatacagaatccagattttatcctggatggactttcaaggtttgactttgggcaagga
atggttggagattgctggtttcttgcttccattgggtctttgacgttccagaaggacatc
ctggaacaagtagtacccctaaatcaaagctttaaagaggattactgtggaatattccac
ttcaggttctggaggtttgggaggtgggtggacgttgtgatcgatgacaagctaccaaca
gttgacggcaatctcattttcgttcattcaaaaactcccaatgagttttggcccgccttg
ctggagaaagcctacgccaaggtgtgtggctcctacacagacatgaatttagggacccct
tcagaggctatgatggacttcactggcggggttcacatcacattcaaactcactgacgct
ccatcaaatctgtgggacctgctgttcagagctgtccaatcgaaatctctgatggggtgt
aacacacctaaaggggaaacatcagcgaacacggtggcacccaacggattagtgaggggt
catgcttacaccgtcacaggagttaaacagatcatgagccaaggcaggccagttaatctg
atccgcctcttcaacccctggggccggggagagtggaagggagactggagcgataagtca
tccatgtggcaaacagtgagtcctaatgatcggaagatgtgtctgtcagtgaaagaggat
ggtgaattctggatgacaatggaagacttctgtaagcacttcacagatgtgactatctgc
tgtatgtgccctgattttcttgacggcaactctaaaggtctttggacacactccatacat
gatggcagatgggttgcaggaaccactgctggtggctgcatgaatttcccaaacagtttc
tggacaaatccccagtatcgggtgaagattgagggattagacagggactgctctgagaca
cagggggacaacaacacgttggtgtctctgatgcagaagcctgacaagagaaacagacgc
ctggtcaaaagtctctacatcggcatcaacatcttcgaggtgccttcccaattcaaagga
cagagggggaagtttcctgccgacttcttcaacaccaatgtgcctgtcgcccaaaccaag
aacctcctgaatgctcgaacagtggtgctgctctctaggctgaaacctggtgaatacctg
attgtgccatcatccttcaacccaaacgaaaccgcctccttcatcctgtccattctctcc
aaggtggaaacccaaatccatgaaaattcaaatgaccaagatattgtggaaatctccaag
cccatgcctactcacaatagagcagatatggacagcaaacaaactatgtttcggcaatat
tctgatcagtttgaggaggtggatgctgaacagcttcagaggattttaaatgaaactctc
ctccaaggatatgcaaagaaaacacaaggcttcagcttggagtcctgtcgcagcatggtg
gccttaatggatacatcaatcactggaaaactgaacagtgctgaatttcaacatctatgg
agaaaagttaccgtgtacaaggatatcttcttacgttcagatgtgaaccattctggaatg
ttgtcattgagtcaactgaggaacgcagtcactgcttcaggggtcaggctgagtgatagt
ctgctgaacctcattgctctgcgctacggtggatcttctggaaacatcagcctggagagt
ttcatcagcctcgttctacgcatggaccgcatggctaaaatattcagacaactcaaccag
ggaggggccatatctcttcgagacaatgagtggatgtacatcactatgtatgcataa
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