Salmo salar (Atlantic salmon): 106611476
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Entry
106611476 CDS
T04363
Symbol
trip11
Name
(RefSeq) thyroid hormone receptor interactor 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106611476 (trip11)
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
106611476 (trip11)
Retrieval pathways
106611476 (trip11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
At4g38062_C
Rod_CreS
CCDC192
GAS
Mod_r
Motif
Other DBs
NCBI-GeneID:
106611476
NCBI-ProteinID:
XP_014067191
UniProt:
A0ABM3F8R5
LinkDB
All DBs
Position
ssa09:47564113..47625344
Genome browser
AA seq
1982 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGQVGGSLSSFTGQISTFTKDMLLEGVEEVGDASTELLVSSSKLE
QVEAEYERLKRIHAELEEKLEASEIQIKRQSAEYRTLMQQKDVEISHLKARQSGLQEEVQ
KLQHSAQSVSSDPAVLPVTAASTTTTAALNHGFHGSDEMDFGDVIWSQQEINRLSTEVMR
LEAEVSHWRRVSQASVAPGAGNGDQGEVLKLQRIIKELREEMGREVDEHQHELAALQDAQ
RQKMADVIRRHRDELAEYEERIEELEEQKQTGGTSPATANALQESSMLSDLQNTIQSLQE
AAEEQEERLKEVTANLEEAGRRQATLQQEKEEAQAENAELLQNYTRLQTSVTELQSRVQE
QEGKARNKAQLDQEIQGLRNALAGAEKEISTLKSLQSETKMEVEHADILELNTIIGTLRK
ENELVEQDKRNLQERLARAEERVESDSLDGGESSLAATEQVSVLRAELEKREQFLREIQE
ERDTLLNELEELDRQNQQATQHVISVKEQLSVQLKESEAVVARLQSELSTTTDQTVALQQ
ELQAQQEKLSQSAFTLNDLHMGKQQLEGTITELRDKLGRVTEMGKEARRETQEFQRTILE
REEQLSAARAELCEAGERGRESGGSREELEELRRELAEMRSSQEKVMSEDYEMKMEKQRL
KTEAEQAQGRIEELARQVREVQAALTRTVLEKDTRIEALKLEKSQLEGELSQAEKGLQEQ
VRQYQQTIEELTAARSMDASALQTEHERTVRLNQEKDLEIFQLRRDVEQMASDHRDTNEM
LSITVAGQKQLTDLLQEKDSFTESLRANMAATQRELEAVVQAATQEAETLRGALEEKDKQ
LGGMKEDKSHLKEEIDRLRDQQNRPQHSGLSEPRTLDIITELENEISQLKSSRDGLEDEG
HSLKRRVEEQRGHLLSSQQSLLAQQNELEQAHQRHEQSRENYDRLIHAKDEEIGRLQQEV
DHLGHTHSSQEQEGVILQQEDKTQSSLNNGENDNEKHDLSKVEINRLVKGIKEKETEISQ
LNERNMNLTRQLDQLVVSREEIGKLSQMVLQKDLEIQALHVRVSLGGGGHNQDVIFLQQQ
LQAYAVEREQVLAVLNEKTRENSQLRSDYHRIMDIVAGKEAVLLKVQQENQRLSTMSDPS
GSQEMFRETIQNLSRIIREKDIEIDALTQKCQTLVSVLQAGDSGGVSSNQFEELLQERDT
LKQQVKKMEEWKMQVITTVKNMQHESAQLVEELHKLQGQVDADNDCTSNLSVDYSRLIHS
YEQKERKLGSLSHELAHVQQTISQLSSTKDVLLGKLDSVAQSPQVTTLSAALMSTAQPPA
AVEPPRHQVAAPATPGNQEGLRQELESLRALLSERETMIRTLLENNHRLSNSAQVSDSEQ
RGQAEESRQVRERLDALQRSVREKDLLIKTKGDQLTQVSESLRNRESDNEVLKQAVTNLK
ERALILEMDTRKLKDENEAVAQRSREKESEFRALQETNMQVSLLMREKEFERSAMSEKAA
AMEKMLKDREQGNSQKSGELNQLLNELRSMQEKAVAFQQERDQVMLALKQKQMDTTAVQT
ELQHVKDREQRLKLELDRLRNHLLEIEDSYTREVLAAEDREAELRKRVTLLDDRLATSSS
QVESTSHQASLQVESLQEQLSGTVRQRDEALIQLRAAQDQVNQYAVSLSNLQMVLEQFQQ
EEKAMYSSELDKYKREKDEWRRKALKLEDRASALQINLDEANAALDSASRLTDQLDLKEE
QLEELKKQVDVRQEMLEESQDKLMNLLNSTEGQVDQALMRNLFMGYFHTPKPKRSEVLRL
MGSVLGLDKDEVNQLLEEEGGHGVGGWVSGWLGGRAVQSVPNTPQRPGAGQGGFNNSFSE
MFVKFLEVESRPALPAPRLPVYDIKPLSAPPPGRTTSSAWAQQPEGGAAAGRGQRAAGES
NPFLAPRSAAVPLMHHGSGSSSASGGHHHLLMKPISDNLPTFTPVPVSAESGGQVLKDLL
KQ
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtggctgggtggactgggctccggcctgggccagtctctcggccaggtcggg
ggaagcctctcctcattcaccggacaaatatcaaccttcaccaaagatatgcttctggaa
ggagttgaagaagttggagatgcttccactgagctgctggtgtccagttctaagctggag
caagtggaggctgagtatgagcgtttaaagaggatccatgcagagctggaggagaagctg
gaggcctcagagattcagattaaacggcagtctgctgaatacaggaccctgatgcaacag
aaagatgtggagatcagtcacctgaaagcccgtcagagtggactacaggaagaggtccag
aagctacaacactctgctcaatcagtttcctccgaccctgctgtacttcctgtcaccgcc
gcctccaccaccaccaccgccgccctcaaccatggtttccatggcagcgacgagatggac
ttcggcgacgtcatttggtcccagcaggagataaaccgcctgtctacggaggtgatgagg
ctggaggctgaggtctcccactggagacgagtgtctcaggcatctgtagccccaggggca
ggaaacggtgaccagggagaggtcctgaagcttcagaggatcatcaaggagctgcgtgag
gagatgggtcgtgaggtagacgaacaccagcacgaattagcagcgctgcaggacgctcag
agacagaagatggccgacgtcatacggcgccaccgggacgagctggcagagtacgaggag
aggatagaggagctggaggaacagaaacagactggaggtactagtccagccacagccaac
gctcttcaggagtcctccatgctctcagacctccagaacaccatccagtccctacaggag
gcagcagaggagcaggaggagcggctgaaggaggtgacagctaatctggaggaggcaggg
aggagacaggccacgctgcagcaggagaaagaggaggcgcaggcagagaacgctgagctg
ctgcagaactacactcggctgcagacgtctgtcacagagctccagtcacgtgtccaggag
caggaggggaaagcccggaataaggctcagctagaccaggagatacaggggctgaggaat
gctctcgcaggtgcagagaaggagatctctactctgaagagtcttcagagtgaaacaaag
atggaggtggaacacgccgacattctagaactcaacactatcatcgggacgttgaggaag
gagaacgaattggtggaacaagacaagcggaatctacaggagagacttgccagggccgag
gagagagtagagtcagacagccttgatggaggggagtcctccctagccgccacagagcag
gtatcagtgctgagggcagagctagagaagagggagcagtttttgagagagatccaggag
gaacgagataccctcctcaacgagctggaagaactggacagacagaaccagcaggctaca
cagcatgtgatctcagtgaaggagcagctctctgttcagctaaaggaatctgaagctgtt
gtggcgaggcttcaatcagagctcagtaccaccaccgaccagacggtggcactgcagcaa
gagctacaggcccagcaagagaaactgagccagagtgccttcactctcaacgacctacac
atgggcaagcagcagctggagggcaccattacggagctgagagacaaacttggacgggta
acagagatgggcaaggaggcacgcagggagacccaggaattccaaagaaccatactggag
agggaagagcagctgtctgctgcccgggcagagctgtgtgaggctggggagagagggaga
gaatccggggggtccagagaggagctggaggagctcaggagagagctggctgagatgagg
agctcccaggagaaagtgatgtcagaagactatgagatgaagatggagaagcagaggctg
aagacagaggctgagcaggcccaggggaggatagaggagctggccaggcaggtcagggag
gtccaggccgctctcaccaggacggtcctggagaaggacacccgtatcgaggctctgaag
ctggagaagagccagctggaaggggaactgagccaggcagagaagggactacaggagcag
gtcaggcagtaccagcaaaccatcgaggagctgaccgctgcccgctccatggacgcctcg
gcactgcagacggagcatgagaggaccgtgaggctgaaccaggagaaagatctggagatc
ttccagctcagaagagacgtggagcagatggcctccgaccacagagacaccaacgagatg
ttgtccatcaccgtggccggacagaaacagctgaccgacctcctccaggagaaggactcc
ttcacagagagcctgagagctaacatggccgccacccagagggagctggaggccgtggtc
caggcagccacccaggaggctgagaccctgagaggagctctggaggagaaggacaagcag
ctgggaggcatgaaggaggacaagagccacctgaaggaggagattgatcgcctcagggac
cagcagaacagaccccagcactccggcctgtccgagccacgcaccctggacatcatcaca
gaactggagaatgagatcagccagctgaagagctccagagacgggctggaggatgagggg
cactccctgaagaggagagtggaggagcagcggggtcacctcctctcctcccagcagtct
ctcctggcgcagcagaatgagttggagcaggcccaccaacgccacgagcagagcagagag
aactacgataggctgatccacgccaaggacgaggagattgggcgcctgcagcaggaagta
gatcacctcggccacacccactcctcccaggaacaggaaggggtcatcctccaacaggaa
gacaagacccagtcgtcactgaataacggagagaacgacaacgagaaacatgacctgtca
aaggtggagataaaccgtctggtgaagggcatcaaggagaaggagactgagatcagccag
ctgaatgagaggaacatgaacctgaccagacagctggaccaactggtggtctccagagag
gagattgggaaactctcccagatggtcttgcagaaggacctggagatccaggcactgcat
gttagagtctcccttgggggaggaggccacaaccaggacgtgatattcctccagcagcaa
ctgcaggcttacgctgttgagagagagcaggtgctggcggtgctgaatgagaagacgagg
gagaacagtcagctgaggtcagactaccatcgcatcatggacattgtagcagggaaggaa
gctgtgctcctcaaggtccagcaggagaaccagaggctgtccaccatgtctgacccctca
ggcagccaggagatgttcagagagaccatccagaacctgtcccggatcatcagagagaag
gacattgagatcgacgcgctgacacagaagtgccagaccctggtgtcggtgctgcaggca
ggagactctggaggcgtcagctccaatcagtttgaagagctgctgcaggagagggacaca
ctgaaacaacaggtgaagaagatggaggagtggaagatgcaggtgatcaccacggtaaag
aacatgcagcatgaatctgcccagctggtagaagagctccacaagctacagggacaggtg
gatgctgacaacgactgcacctcgaatctctcggtggattacagccgtctgatccacagc
tatgagcagaaggagaggaaactaggcagtctcagtcacgagctagcccacgtccaacag
accatcagccagctgagcagtactaaagatgtcctcctggggaaactggacagtgtggcg
cagagtccccaagtcaccacactgtctgctgctctgatgtctactgcccagcctcctgct
gcagtggaacctcccagacaccaggtggcagcacctgcaacaccagggaaccaggaagga
ctaagacaggagctggagtctctgagagccctcctgtctgagagggagactatgatcagg
accttgctggagaacaaccaccgcttgtctaactcagcccaggtgtcagacagcgagcag
cgtggccaagctgaggagtccagacaggtcagagagagactggacgctctgcagcgctct
gtcagggagaaagacctgctcatcaagactaaaggagatcaactcacccaggtgagtgag
agcctgaggaaccgtgagagtgacaacgaggtgttaaaacaagccgtgaccaacctgaag
gagcgagcccttatcctggagatggataccaggaagctgaaggatgagaacgaggctgtg
gcccagcggagcagggagaaggagtcagagttcagagccctgcaggagaccaacatgcag
gtgtccctcctcatgagggaaaaggagtttgagaggagcgccatgtcggagaaggctgcc
gccatggagaagatgctcaaggacagagaacagggcaacagtcagaagtctggggagctg
aaccagctgctgaatgagctgaggtccatgcaggagaaagctgttgccttccagcaggag
agagaccaggtcatgctggctctcaaacagaaacagatggataccacagccgtacagaca
gagctgcagcatgtgaaggacagagagcagcggttaaagttggagctggaccggctacgt
aaccacctgctggagatagaggactcctacacacgggaggtcctggctgctgaggacagg
gaggcggagctacgcaagagagtcacgctattggacgacagactggccacttcctccagt
caggtggagagcaccagccaccaggcgtctctccaggtggagtctctccaggagcagctg
agtggaacggtgaggcagagagacgaggccttgatccagctcagagcagcacaggaccag
gtcaaccagtacgccgtgtccctgtccaacctccagatggtgctagagcagttccagcaa
gaagagaaagcgatgtattcgtcagagcttgataaatacaagagggagaaggacgagtgg
aggagaaaagcacttaaactggaggacagagcctcagcacttcagatcaacctagatgag
gctaatgcagcgctggactcagcctccagactcactgaccagctggacctaaaggaagaa
cagctagaagagctcaagaaacaagttgatgtgaggcaggagatgttggaagagtctcag
gacaagttaatgaacctgctgaatagcacagagggacaagtagaccaggctctgatgcgg
aacctgttcatggggtacttccacaccccgaaacccaaacgctccgaggtgctgaggctc
atgggtagtgtcctgggactggacaaggatgaggtcaaccagctgttggaggaggaggga
ggccatggtgtcggcggctgggtgtccggctggttgggaggcagagctgtacagagtgtc
cccaatacaccacagagacctggagcaggacaggggggcttcaacaactcgttctctgag
atgtttgtaaagttcctggaggtggagtctaggccggcgctccctgcccctagacttcct
gtctatgacatcaaacctctcagtgctccgcctcctgggaggaccaccagctcagcctgg
gctcaacaaccagaaggaggggcggcagccggcaggggacagagagcagccggggagtcc
aaccccttcctggctccccgctctgcggccgtaccactgatgcatcatgggagtggtagt
tccagtgcgtcaggaggacaccaccacctcctaatgaaacccatctcagacaacctgcct
accttcacccccgtgcccgtctccgctgagagcggagggcaggtgctcaaagacttactc
aagcagtga
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integrated database retrieval system
