Salmo salar (Atlantic salmon): 106611509
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Entry
106611509 CDS
T04363
Name
(RefSeq) protocadherin-19-like
KO
K16499
protocadherin delta 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106611509
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106611509
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
ResB
Motif
Other DBs
NCBI-GeneID:
106611509
NCBI-ProteinID:
XP_014067258
UniProt:
A0A1S3SSE4
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Position
ssa09:complement(50786134..50877849)
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AA seq
1109 aa
AA seq
DB search
MYAREMDFIQIIWIVILCWTGVDSVINLKYSINEEQKSGYIIGNVTKDAQTQGFAIAPRA
PYLRVISNSEPRWVELSPAGLLLTHQKIDRDVACRQTAKCTVSLEVMSNSMEICVIKVEI
VDLNDNAPRFPTNHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNVKVIDSNDNNPVFD
QPVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGPLDYEATHIYEIDVQAKDLGPNSIPAHCKVTVNVMDANDNPPVISLLSVNTELIEVS
ENAPRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQRDTY
NLTIQAEDSGTPPLRATKSFVVKVTDENDNPPHFLKPHYQEMVLENNLPGSCLLAVSAVD
PDLGMNGTVSYTIVPSEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDQGN
PSLSSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPRNAGVGYLVTQVKADDYDEGEN
GRLTYTISEGDRLFFEIDQVNGEVRSTKMFGEQVKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGSQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFINVDNQNSRNAAPNHGSYQQHSFASGQGPQQPDLIINGMPLPETDNYVD
SSYVNSRAHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYIDTAVNDVLNMTV
PPNVCQLPDQGRRKDSSEGFHCQDECRILGHSDRCWMPRVPGPARGKSPDHGHPRNNVIA
LSIEATTVDVPHYEDCGTGTIKRTFATFGKDGPEDPERGELKGNKRTMESQAYSPKANGG
AVREAGNGREAASPITSPVHLKSPLAKAPSGYNTLKCRDAERIANHSMLRQPEGKDSEPA
VREINTLLHDSGHVEKESPSSKRLKDIVL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccagggagatggattttatacaaattatttggatagttattttatgctggact
ggggttgattctgttattaatttgaaatactcgataaacgaagagcagaaatctgggtat
atcattggaaacgtgacaaaggatgcacaaacgcaaggatttgccattgcaccacgggcg
ccgtacttgcgggtcatctcgaattcagagccgcgatgggtggaactcagcccggctgga
cttctcctcacacatcagaaaatagaccgggacgtggcttgccgacagacggcaaagtgc
actgtctctctggaggtgatgtcaaactctatggagatatgtgtcattaaagttgaaatt
gtggatttgaacgataatgcgcccagattccccacaaaccacattgacattgaaatctca
gagaacgcctcccctggtaccaggttccccctagagggggcaagcgatccggactcgggg
atcttcggtgtgcaatcatattcgatcaccccgaatgagctcttcgggctggagattaag
actaggggggacgggtccaagattgccgagctcgtagttcaaaaatctttagatcgggag
acccagtctcactattcatacgaaatcagtgcagaagacggtggagaccccccaaagatt
ggcgcagtccagctcaatgttaaagtaatagattcgaatgataataatcctgtttttgac
cagcctgtgtatacagtgaacgtgatggagaattctcctattaatacacttgtaattgac
ttgaatgcaacggatcctgacgagggaactaatggtgaggttgtgtactcgtttaacagt
tacgtcaccgagaaaacgagagacgtatttaaaattgaccctagaaccggtattatcact
gtaaatggccctttggattatgaagcaacccatatttacgagattgatgtccaagccaaa
gatttaggtcccaattctattccggctcattgtaaagtcactgtcaatgtgatggatgcg
aacgataacccacctgtcattagtttattgtcggtgaacacggagctgattgaagttagt
gagaacgcgcctcgtggatacgttattgcattagtgagggtctcagacaaggacgcgggc
gcgaatggtaaggtgcagtgtagactacaaggcaacgttcctttcaggctccaggaatac
gagagcttctcaaccatccttgttgatggcaggctagacagagagcagagggacacgtac
aatctaactatccaagcagaggacagtggtaccccccctttacgtgccactaaatcgttt
gtagtgaaagtcacagatgaaaatgataaccctccccactttctaaaaccacattaccaa
gagatggtcctagaaaacaacctgcctggctcatgtttgctggctgtgtcagctgtagat
cctgatttgggcatgaatggcacagtttcatacaccatcgtgcccagtgagattaaacac
atggacgtaaacacatatgtcagcataaatccttcagggcgtatttattccatgagatca
ttcgaccacgagtacactaggacttttgacttcaaagttttggccagggaccaggggaat
ccgtccttatccagtaacgcaacggtgcgcattgtcgttttggatgtgaatgacaataca
cctgttatgaccactccacccctggtaaatggtaccgcggaggtatccattccaagaaac
gcaggagtgggttacctggtgacccaagtcaaggccgacgactacgacgagggggagaat
ggaaggctgacctataccatctcggagggggacaggcttttctttgagatagaccaagtg
aatggagaggtgcggtccaccaagatgttcggggagcaggtcaagtcgacctacgagatc
acagtggtggcacgcgaccacgggaaaccgtcgttgtccgcctctgcatacattgttgtt
tacctctcaccggacctgaatgctcaggaatctattggacccgtaaacctgtcgttgatc
ttcatcattgccctgggctctattgctgctatcctgtttgtcactatgatttttgtggca
gtaaagtgcaaaagggataacaaggagatccgaacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcgtacggcagccagaagaagtcgagcaagaagaagaagctg
agcaagaacgacatccgcctcgtgccgcgcgacgtggaggagacggacaagatgaacgtg
gtgagttgctcatctctcacctcctccctcaactacttcgactaccaccagcagagcctg
ccgctgggctgcaggcgctccgagagcaccttcatcaacgtggacaaccagaactcacgc
aatgctgcacccaaccacggcagttatcagcagcactccttcgccagcgggcagggcccc
cagcagcctgacctcatcatcaacggcatgccgctgcctgagacggataattatgtcgac
tccagctatgtgaacagccgagcacatcttatcaaaagcacatcaacattcaaggacctg
gagggcaatagtctgaaggacagcgggcacgaagagagcgaccagacggacagtgagcac
gacgtccagagaggccactacatagacacggctgtcaacgacgtgctcaatatgaccgta
ccccccaacgtctgccagctgcctgaccaaggtaggagaaaagactcaagcgaaggcttc
cactgccaggacgagtgtcgcatcctgggccattcagaccgctgctggatgccccgtgtg
cccggcccagcccgtggcaagtctcctgatcatggccacccacgtaataacgttattgcc
ctgtccatcgaggccaccaccgtggatgtgccccactacgaggactgcggcaccggcacc
atcaaacggacttttgccaccttcggcaaggatggcccagaggacccagagcggggcgag
ctaaagggcaacaagcggacaatggagtcgcaggcgtacagccccaaggccaacggcggc
gccgtgcgcgaggcaggcaacgggcgcgaggcagccagccccatcacctcccctgtgcac
ctgaaaagccccctggccaaggcgccatccggctacaacacgctcaagtgccgcgacgct
gagcgcatcgccaaccacagcatgctgcgacagcccgagggaaaggacagcgagccggcc
gtccgggagatcaacacgctcctccacgacagcggccatgttgagaaggagtctcccagc
agcaagcgcctgaaggacattgtgctctaa
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integrated database retrieval system