Salmo salar (Atlantic salmon): 106611587
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Entry
106611587 CDS
T04363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106611587
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
106611587
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
V-set
LRRNT
LRR_9
LRR_Zer-1
Ig_6
Receptor_2B4
Big_6
Motif
Other DBs
NCBI-GeneID:
106611587
NCBI-ProteinID:
XP_014067430
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Position
ssa09:56479315..56954531
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AA seq
628 aa
AA seq
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MRMSSAVKRKSRDRMVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQS
KSVLCHRKRLPSIPDGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEP
GAFNPLYSMHSLSLKSNRIKLIPMGVFTGLSNLTRLDVSDNNIVILLDYMFQDLNNLKFL
EVGDNDLVYISHRAFSGLLSLETLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLHA
YSFKKLFRLRHLEIDSWTSLDSVPANTLHGLNLTTLFITNTNLSTFPYQAIKHLHYLTLL
NLSFNRIRHIEGRMLSELVHLRELHLVGAQLSTVEPYAFQGLRWLKVLNVSHNRLDTLEK
GVFQAPEALEVLLIDDNPLVCDCRLMWILQRRQSIYFGDSQPECSTPEGIRGKPFREFKE
TLLSYYVTCTKPKIRENKTQTIAVDEGQPVRLHCSVEGTPRPVVSWLSPRRHLLTNKSHG
RVMVHNNGTLEIKAAEVQDGGVYLCMATNTAGNDSLMTSLAVKSLGSLYANRTQYYTDPS
NATTNGTINVTYGLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYV
PRSKSNGTSIDGGAEGQAGPRRFNMKMI
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgagcagtgcagtaaagagaaagagccgtgacagaatggtcgactgtatgagt
aaagtcatgctgcacacggccctctcatgctggcaaccattcctgggactggctcttgtg
gctgtcttcgtgggttccgccttaggatgtcccgcccgctgcgactgctcggcccagagc
aagtcggtcctgtgccaccgcaaacgcctaccgagcatcccagatggcatccccatcgag
accaggatcctggacctgagcaagaacaagctgcaggccgtcaacccggatgactttgcc
ccctatcctggtctagaggatttggacctcagtgggaacattatcagctatgtggagccg
ggggccttcaaccctctgtacagcatgcactcactcagtctcaaaagcaatcgtattaag
ctcattcctatgggcgtcttcacaggcctgtccaacctcacccggttggacgtcagtgac
aacaatattgtcatcctgctggactacatgttccaggacttgaacaatctgaagttcctg
gaggtgggtgacaatgacctagtgtacatctcccacagggcgttcagtggactgctgagc
ctagagacgctaaccttggagagatgcaatctgacggtggtgcctactgaggccctgtcc
cacctgcacaacctggtaagacttcacctgcgatacctcagcatcagcaccttgcatgcc
tactccttcaagaagctgttccgattgcgccacctggagattgacagctggacctcgctc
gacagtgtgccggccaacacgctgcatggcctcaatttaaccacgcttttcatcaccaac
accaacctgtccaccttcccataccaggcaattaagcacctgcactacctgacgctcctc
aacctgtccttcaaccgcatcagacacatcgaagggaggatgctgtcggagttggtgcac
ctaagggaactgcatctggtcggggctcagttgtcgaccgttgaaccgtacgcatttcag
ggcctccggtggctcaaggtcctcaacgtctcccacaaccgtttggacaccctggagaag
ggtgtcttccaagctcctgaggctctggaggtcctcttgatcgatgacaaccccctggtt
tgcgactgccgcctcatgtggatcctgcagaggagacagtccatctactttggtgactca
cagccggagtgcagtacccccgagggcatccgcggcaagcctttcagggagttcaaggag
accctgctctcctactatgtgacgtgcaccaagcccaaaatacgagagaacaagacgcag
acaattgccgtggacgaaggtcagccagtgagactgcactgcagtgttgaggggaccccc
aggccggtggtttcgtggctgtccccacgccggcacctcctcaccaacaagagccacggt
agagtcatggtccacaacaatgggacgctagagatcaaggcagccgaggtgcaggacggc
ggggtgtacctttgcatggcaaccaacactgcgggtaacgactcattaatgacctcccta
gcagtgaaaagcctggggtcgctctacgcaaacaggacccagtactacacagatcccagc
aatgccactaccaatgggactatcaacgtgacctatggcttggacctaaagactatctta
gtgtcgacagcaatgggttgtttcacattcctgggggtggttttgttctgcttcctgctc
ctgttcgtttggagtcggggcaaagggaagcataaaaacaacatagatattgaatacgta
cctcggtccaagtctaatggcacctctatagatggaggagcagaggggcaagctggaccc
cgtcgctttaacatgaaaatgatctaa
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