Salmo salar (Atlantic salmon): 106611784
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Entry
106611784 CDS
T04363
Symbol
pcdh10
Name
(RefSeq) protocadherin 10
KO
K16499
protocadherin delta 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106611784 (pcdh10)
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106611784 (pcdh10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
106611784
NCBI-ProteinID:
XP_014067838
UniProt:
A0A1S3SU15
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Position
ssa09:61831177..61843193
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AA seq
1032 aa
AA seq
DB search
MIVLFLLLCITNGVVSQIRYSVPEEADHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFVNERIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NAPVGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVCGEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKVTDVNDNAPDITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVAKDTGTP
SLATSKSIKVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMDCDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGSPELSSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSKETTLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLTSDCC
LGCATCCSRHARARKKKLSKSDIMLVQSANVTGAGTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSTGADLFSNCTEE
CKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFESQEQTGDKSFSTFGK
ETPLSHLYQNHYQNHHKNHLHLSHHHATHANQATLERREFEALLSSTRAPYKPAYRGKGF
ASSFRVDIPETA
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattccttcttctgtgtattacaaatggagtggtctcgcagatacgctac
tctgtgccggaggaggcggatcacggcacgttcgtagggaatattgccgaggaccttgga
ctggacatgaccaaaatcgcctcgcggcgcttccaggtggtgcctagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcgtcaacgaaagaattgaccgggag
cagatctgcaagcagagtgccagctgcctattacaccttgaagtgtttctggagaaccca
cttgagctgttccgcgtggagatagaggtcgtggatatcaatgacaatccgcccagcttc
cccgagaccgacatcacggtggagatttcagagagcgctacccctggtacccggttccct
cttgagagtgcattcgatccggacgtgggctccaacgcgctgcgcacatacgacatcacc
accaataactacttctacctggatgtgcagacgcagaccgacgggaacaaattcgcagag
ctggtgctggagaagccgctggacagggagcagcaggcggcccacaggtacgtgctaact
gctgtggacggggggcagcctccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccggtgtattcggtgagccttcaggaa
aacgcaccggtggggaccctcgttatccaactgaacgccaccgacttggacgaggggcag
aacggggagatagtgtattcattcagcaaccacatatccagccgcgtcaaggatctgttc
gccatagatgcgcgcactggacgaatcgaggtgtgcggcgaggtggattttgaggagagc
agcttatatcaaatattcgttcaggcgaaagatcttggacccaatgcagtggctgcacac
tgtaaagttctggtgaaagtgacagacgtaaatgataatgctcctgatatcacctttagc
accgtgactgagtcggtgagcgagagggcagccccaggtaccgttatagccctgctgagc
gtgacggacaaagatgctgaggaaaacggaaagattcatgttgaaatcctcggtgacgtc
ccgttcaaactcaaaccctcctttaggaactatttcaccattgtaacagacggacctcta
aatagggagaatgctgactcttattcagtgactgtagttgccaaggatacagggacccct
tccctcgcaaccagtaaatcaatcaaagtgcaagtgtcggatgaaaatgacaatgcgcca
acgtttacgcagcccatatatgatgtttatgtgactgaaaataatgtgccaggtgcttat
atccacgctgtgacagctttggacccagacgttggacagaacgctctaattagttactcc
ataatggattgtgatattcagggtatgtctgtgaaaacatatgtgtcaatcaacgaggaa
actggctacctttacgcactcagatcattcgattacgagcagcttaaagacttcactttc
atggttcaggcgaaagatgcaggtagccccgagctctcctcgaacgcgacggtcaaagtg
atcatcgtagaccagaatgacaaccctccctcagtcattgctcctctgggtaaaaatggc
actgcgagagagccgctgccccgctccgccgagcctggctacctggtgacccgtatcgtc
gccatggacgcagatgacggcgagaacgcacggctctcctacagcatccagcgggggaac
gagaacggcatgttccgtatggactggaggacaggagagctgcgcactgcccggcgcgtc
tcaaccaagcgggacccgaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccacccctctcctccaccgccagtgtgttcgtggtgctggtggacagcgtggtggag
gaccaccgggagaggggcaccgccaagtccaaggagaccactctggaccttaccctcatc
ctcatcatcgccttgggctctgtctccttcatcttcctcctggctatgatcgtgctggcc
gtgcgctgccagaaggacaaaaagctaaatatctacacgtgcctcaccagtgattgttgc
cttgggtgcgccacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tctgatatcatgctggtgcagagcgccaacgtcaccggggccggtacagcccaagtgccc
gtggaagagtccgggagcttcggctctcaccaccaaaaccagaactattgctaccaggta
tgtctgacaccggagtctgccaaaaccgacctcatgttcctaaagccgtgtagcccatct
aggagcacagacacggaacacaacccgtgcggggccatagtgacagggtacactgaccag
cagcctgacatcatatcaaacggcagcattttatcaagcgagaccaaacatcagcgagcc
gaactcagttacctggtggacagacctcggcgtgtgaacagttcggctttccaagaagcg
gatctcgttagctctaaagacagtggtcacggtgacagcgaacagggcgacagtgaccat
gacgccaccaatcgaggtcactctacgggcgctgatctcttctctaactgcacagaggag
tgcaaggctctgggccactccgaccgctgctggatgccctccttcgtgccctccgacggg
cgccaggcggcagactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgac
actgaggtatttgaaagccaagagcaaacgggcgataagtcattctctacctttggcaaa
gagacgcccctcagccacctctaccaaaaccactaccaaaaccaccacaaaaaccacctc
cacctcagccaccaccatgccacccacgccaaccaagccacgctagagaggagagagttt
gaggcgcttctgtctagcacgcgagcgccttacaaacctgcctatcgaggaaaagggttt
gctagctcctttcgcgtggacataccagagactgcatga
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