Salmo salar (Atlantic salmon): 106611846
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Entry
106611846 CDS
T04363
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106611846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106611846
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
USH complex and associated proteins
106611846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
SAM_7
Attacin_C
Motif
Other DBs
NCBI-GeneID:
106611846
NCBI-ProteinID:
XP_014067923
UniProt:
A0A1S3SUB3
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All DBs
Position
ssa01:complement(98020411..98046421)
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AA seq
497 aa
AA seq
DB search
MNDKYHRAARDGYLDLLREATRKELNAPDEDGMTPTLWAAYHGNLDALRLIVGRGGDQDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANVWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALNPKLVSKLKDRAFRMAERRIKDCVKMQQKHHQRMERKFLKESVASDNSDAMSF
TSYNSSSTLNRKLPQFNTLTSNMPYSQATLHSTAKGRTKIQKKLEKKKQVDGTFKIYEDG
RKSVRSLSGLQLGQDVMFLKQGTYANSKDRSRLNIRDMFPHHGNNHDHHDDYDDDCADTI
SHISRAISDPGLHEAAYSEISADSGRDSLFTRPGLGTMVFRRNYVSGGLFGIGARDKGSV
AGSEPIGRAPNVHLRGHLQRRQPSLDDAIEMDSIGSALSLQERHLQELPWEEADVGLDEE
LEPENGPLETFLASQSLGEFMPIFRKEKIDLEALLLCSDQDLTSIHIPLGPRKKLLEACK
RRLDTLEEPEGIEDTDL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagtaccaccgggcggcccgggatggctacctggacctactcagagaggcc
actcggaaggagctgaatgcgcctgatgaagatggaatgacaccgactttatgggctgcg
taccacggcaaccttgacgcgctccggcttattgtgggaagaggaggtgaccaggacaag
tgtgatatctggggcaacactccgctccacctggccgccgccaacggccaccacaactgc
ctatccttcctggtgtcattcggagccaacgtgtggtgcctggataatgactaccacacg
cccctcgacatggccgccaccaagagccacatggactgtgtccggtacctggactccatc
gccgccaagcagtcggccctcaaccccaagctggtgagcaagctgaaagacagagcattc
cgcatggcggagaggaggataaaggactgtgtgaagatgcagcagaaacaccaccagcgg
atggagaggaagttcctgaaggagagtgtagcatcggataactcagatgccatgagcttc
actagttataacagcagcagcacgctcaaccgcaaacttcctcagttcaacactctcact
tccaatatgccatactcacaggccactcttcactccacagccaagggtaggaccaagatt
cagaagaagctagagaagaagaaacaggtggacggcaccttcaagatctacgaggatggg
aggaagagtgtacgctcgctgtctggccttcagcttggccaggacgtcatgttcctcaag
cagggcacctatgccaactccaaggaccgctcgcgtctcaacatccgggacatgttccct
caccacggcaacaaccacgatcaccatgacgattatgacgacgactgtgcggacaccatc
tcccacatctcccgtgccataagcgacccgggccttcacgaggcagcctactctgagatc
agcgccgactcaggccgcgactctttgttcacccggccaggtctcggaaccatggtgttc
cgacggaactacgtatccggcggtctcttcggcatcggagcccgggacaagggttctgtg
gctggcagtgaacccataggccgggcccctaacgttcatctccgtggccacctccaacgt
cgccaacccagcctggacgatgcaatagagatggacagcatcggcagtgccctgagcctc
caggagaggcacctacaggagctgccctgggaggaggctgatgtgggcctggacgaggag
ctggagcctgagaacggaccactggagaccttcctggcctcccagagcctgggggagttc
atgcccatcttcaggaaggagaaaatcgacctggaggccctactgctctgctcggaccag
gacctgacctccatacacatcccccttggacctaggaagaagctactagaggcctgtaag
agacggttggacaccctggaggaaccagagggcatcgaggacactgatctctga
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