Salmo salar (Atlantic salmon): 106611963 Help Entry 106611963         CDS       T04363                                  Symbol polr1a Name (RefSeq) RNA polymerase I subunit A   KO K02999   DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa03020   RNA polymerase Brite KEGG Orthology (KO) [BR:sasa00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     106611963 (polr1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sasa03021]     106611963 (polr1a) Enzymes [BR:sasa01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      106611963 (polr1a) Transcription machinery [BR:sasa03021]  Eukaryotic type   RNA polymerase I system    RNA polymerase I     Core subunits      106611963 (polr1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_2 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 ASCH Motif Other DBs NCBI-GeneID:  106611963 NCBI-ProteinID:  XP_014068156 UniProt:  A0A1S3SUY3 LinkDB All DBs Position ssa09:complement(74702225..74712383) Genome browser AA seq 1467 aa AA seqDB search MLFGKEVPWRRLEGMTFGMYSAEEIRKLSVKNITNFRFLDNVGNVAPNGLYDLSLGPADS KEVCSTCMQDFNNCPGHLGHIELPLPVYNPLFFDKLYLLIRGSCLNCHMLSCPRAAIHLL LNQLKLLDVGALQEVYELEHVLNQFLEGNAQASGVEIQVVLEDYCAHVNKGKTGGDHSSP IKHLCEKKNKLITLFWRVQMNSRKCPHCKSGRSQVRREHNSKLIVTLPAAMYKDGAIKGP DEEDGMAGKRGYLTPSTARDHIAKLWDKEGFFLKCLFSGLEELESSPNGIYPGLFFLELM VVPPCRYRPINRLGDQMFTNGQTVNMQAVMKDSGVIQKLLALLAGEKLKEKELELEEVQE ADPSQTDQAFLAGIPGVTLTDKLYNTWIRLQSHVNIVFDSDMDKLMTEKYPGIRQILEKK DGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGVPMVFATKLTYPQPVTPWNVKELRQAV LNGPNVHPGASMVINEDGSRTILSSTNLTQREAIAKQLLTPCTGQHMMPMKIVNRHIKNG DVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGR AEAYTLVSTDQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFSRDQYTELVYRGLTDKV GRVKLLPPAILKPFPLWTGKQVVSTLLMNVIPGNHIPLNLTGKAKIPSKAWIKESPRCVP GYKPETMCDSQVIFRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLF TAYLQLYRGFTMGVEDILVKLGANRQRKQIIKESVTCGTKALQAAFNLPDTVDESEARGR WQDAHLNPDQRDFNMVDLKFKEVANQVNNDINKVVMPLGLHCSFPENNLQLMVQSGAKGS TVNTMQISCLSFHFIRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDVPKTQFLQP RQFPFIQDNYEVIRKLKCLDEVLAKLDPQAATNHFKAIRKWKAKREHLSPREGAFLLFSQ KKLKKTECQTLENLANGRDTATLKLVDRWISDQECWPDISFGSVSETFDSIVESYLKDIQ VKQLAEGSSKNLDAQRLKHLLQLKWQRALCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAG RGEMNVTLGIPRLREILMIASSSIKTPMMSIPVLNSKKAIKRVKTLRKKLTRVCLAEVLH KVDVLETLRVKNKRQKDRVFKITFRFLSPERYQEDKMLTPHQILHYMENRFFRLLLEAIK KRNTKLASINAVETRKATVRDNDQDVGDSSVVPFSHTYFIEDYSDSQQGLCVMETKGITR CXLSEVTKKDGSKELELKTEGINMHELFNHSEILDVNRLYSNEVHAMANTYGIEVALRVI EKEIKDVFAVYGTNRLTTSLAIYSSQHMCFEGXQSNSLQQIETSYKFLKQATMLGSHDKL VSPSACLVVGKVVKGGTGIFDLKQPLQ NT seq 4404 nt NT seq  +upstreamnt  +downstreamnt atgctttttgggaaagaagtaccatggaggcggctggaaggaatgacatttggcatgtac tctgccgaagaaataagaaagttgagtgtcaagaacattaccaacttcagattcctggat aatgttggtaatgttgcccccaatggcctctatgacctgtcattgggcccagctgattcc aaagaggtgtgctccacctgtatgcaagacttcaacaactgccctgggcaccttgggcac atcgagctacccttacccgtatacaacccactcttctttgataaactgtacctgctgatc cgagggtcatgtctgaactgccacatgctgtcctgccccagagcagcgatccatctcctg ctgaaccagctgaagctgctggatgtgggagctctacaggaggtctatgagctggagcat gtgctgaaccagttcctggaaggcaatgcccaagcttctggggttgagatccaggtggtg ttagaggactactgtgctcatgtcaacaaagggaagacaggcggcgatcacagctcacca atcaagcatctctgtgagaagaagaacaagcttataacactcttctggagggtccaaatg aactccaggaaatgccctcactgcaagagtggccgatcacaagtgcgcagggagcacaac agcaaactgattgtcaccttgcctgcggctatgtataaagatggtgccatcaagggaccc gatgaagaagatgggatggctggaaaacgtggatacttgacccctagcacggcacgggat cacatcgccaaactgtgggataaagaaggtttcttcctgaagtgcttgttctctggactg gaggagttggagagctcacccaatggcatttaccctggccttttcttcctggagcttatg gtggtccctccatgcaggtatcggcccattaaccgtctgggagaccagatgttcactaac ggccagacggttaacatgcaggcagtgatgaaggacagtggcgttatccagaagctccta gcacttctagctggagagaagctgaaagaaaaggagttggagctggaggaggtacaggaa gccgacccctctcagacagaccaggccttcctggcagggatccccggtgtcacactcaca gataaactctacaacacctggattcggctccagagtcacgtcaacatagtctttgacagt gacatggacaaactgatgacggagaagtaccctggcattcgtcagatcttagagaagaag gatggtttgttcaggaagcacatgatgggtaaacgtgtggactatgcagcacgctctgtt atttgtcctgacatgtacattgggaccaatgagattggagtacccatggtgtttgccacc aagctgacttaccctcaacctgtgacgccttggaatgttaaggagctgaggcaggcagtt ctgaacgggcccaatgtccaccctggggcctccatggtcattaacgaggacggctcccgc accatcctgagcagtactaacctcacccagagagaggccatcgccaagcagctcctcaca ccctgcaccgggcagcacatgatgcccatgaagatagtgaatcgtcacatcaagaatggc gacgtcctgctcctcaaccggcagccaacactgcatcggccgtccatccaggctcactgc gcccgcatcctgccaggggagaaagtgttaaggcttcactacgctaactgtaaggcctac aacgctgactttgatggggatgagatgaatgcccatttccctcagagtgaactgggcagg gctgaggcctacacactcgtcagcactgaccagcagtaccttgtgcccaaggatgggaag cctctggcgggtctgatccaggatcacatggtgtcaggcactaggatgaccatccgcggc tgcttcttctcccgtgaccagtacactgagctggtctaccgaggtctaaccgacaaggtc ggcagagtcaagctgctgccgcccgccatactcaaaccattccctctctggactgggaaa caggtggtgtctacactactgatgaacgtcatcccaggaaaccacatccctctgaacctg acagggaaggccaagatccccagtaaggcctggatcaaggagtctccacgctgtgttcct ggctacaagcctgaaaccatgtgtgactcccaggtgatcttccgtcagggagagttgctg gtgggggtgttggacaaggcccactatggcagctctgcatacggcctggtccactgctgc tacgagctgtatggaggagagaccagtggtaaactcctcagctgcctggctcgtctcttc actgcctacctccagctgtaccggggcttcactatgggtgtggaggatatcttggtgaaa ctaggagccaacagacagagaaagcagatcataaaagagtctgtcacttgtgggactaag gccctgcaggcagcctttaaccttcctgacaccgtggacgagagtgaggctaggggccgc tggcaggacgcccacctcaacccagaccagagagacttcaacatggtggacctcaagttt aaggaggtggccaatcaggtcaacaacgacatcaacaaggtggtcatgcccctgggtctc cactgcagcttccctgagaacaacctccagctgatggtgcagtctggggctaaaggctcc actgtcaataccatgcagatctcatgtctgtcgttccacttcataagatgtgtgatcaaa catctggagggcctggtggttcagtatgacctgactgtgagggacagtgacggcagcgtg gtccagtttctctatggagaggatggcctggacgtccccaagacacagttcctccagcca aggcagtttcccttcatacaggacaactatgaggtcatcagaaagttaaagtgcttggat gaggtcctggccaaactggaccctcaggctgccaccaaccatttcaaagccatcaggaag tggaaagccaagagggagcatctttctcccagagagggggccttcctgctcttctcccag aagaaactgaagaagacagagtgccagactctagagaacctggccaatggcagggatact gccactctgaagctggtggatagatggatctctgaccaggaatgttggcctgacatctca tttgggtcagtgtcagagacatttgacagcattgtggagtcctatctaaaggacatccaa gtcaagcagttagctgagggaagctcgaagaaccttgatgcacaaagactgaagcatctg ctgcagctgaagtggcagcgagccctgtgtgacccaggggaggcggtgggtctgctggct gctcagagcatcggagagccttccacccagatgaccctcaacaccttccactttgccggc aggggggagatgaacgttaccctcggtatcccaaggcttagagaaatattgatgattgcc agttccagcatcaagactccgatgatgagtattcctgtgttaaacagtaaaaaagccatc aagcgggtgaagacactaaggaagaagctgactcgtgtgtgtctagctgaggtgttgcac aaagtggacgtcctggagacactccgggtgaagaacaaacgacagaaggaccgcgtcttc aagatcaccttccgctttctttccccagagcgctaccaggaagacaagatgctgactccc catcagatcctccactacatggagaacagattcttccgcctactactggaggccattaag aagcgcaataccaagctggcctcaatcaacgcagtggaaacacgcaaggctacagtacga gataatgaccaggatgtaggggactcctcagttgttcctttcagccatacttactttatc gaggactattccgacagccagcagggtctctgtgtgatggagactaagggcatcaccaga tgtncgctcagtgaggtcactaagaaagatggctccaaggagctggagctcaaaactgag ggcatcaacatgcacgagctgtttaaccacagtgaaattcttgatgtgaatcggctgtac tccaatgaggtccacgccatggcaaacacgtatggcattgaggtggccctgagagtcatt gagaaggaaattaaagatgtcttcgctgtctacggtacaaacaggctcacaacttcttta gctatctactcatcccaacacatgtgttttgagggancgcagtccaactcactgcaacag atcgagaccagctacaagttcctgaagcaggccactatgctgggctcccatgataagttg gtctctccctcagcttgcttagtggtgggtaaggttgtaaaaggagggaccgggatcttt gatctcaagcagccattgcaataa

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