Salmo salar (Atlantic salmon): 106612004
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Entry
106612004 CDS
T04363
Symbol
uvssa
Name
(RefSeq) UV stimulated scaffold protein A
KO
K23720
UV-stimulated scaffold protein A
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
106612004 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106612004 (uvssa)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
106612004 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
DUF1195
Motif
Other DBs
NCBI-GeneID:
106612004
NCBI-ProteinID:
XP_014068237
UniProt:
A0A1S3SV69
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Position
ssa09:74473287..74498855
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AA seq
749 aa
AA seq
DB search
MWTYCTGVSITSGKRMDHAQRDKLSELVEELTTSGEPQLNPNKLKEVKKICKVSNDYIEH
FYHLTMTQLAQEHAEIRLSAFQMVSELFTRSHHFRVLLVDNFQEFLDLTVETDSDEPLPP
PKEVARKLKTIAIKTVQEWQTTYGEAYKKLALGYHFLKQVKKVDFHDVQARTLAERKREE
ERQKRLERIYKDKVEKATKEMEDASEEIEECLTEINNCMKLLLPAEFDLSDLDTSTPANN
STASVSSVPNEKASTSSDLDEQPCCSKDLELQREPKNPETSTATKTNEEKEEEDPSDEDS
DMEDVLDEDAFIRNTGLISHKYSLDLNLSTDLKLKETEENEAVVNTMKDLHKLLSTKHLP
VVQYWVQVFTKAGVPEPLLRRAIDFKSSLERALQKHEDLHIDYKARHRRVMKAPEGSDDD
DDDFEEVPEKEGFEPHIPDHLREEYGLEPSTSVASKKPVQPQVKCPATGASHTLSRPRKR
ATDEEQDPTCAAATLRLFKQRLLPQPPSTSSAAGGHVDPTYQASDPSEERDKAPVIPFGL
DLYYWGEEQPTAGKIIKNSSQHQFWVPNEVEEEVENKELAAQMKSRYITFAGRFQPVKHR
CKTPMPNGALCERQDRVKCPFHGPIIPRDELGKPTNPEDSVRLEKEEWKRREDQPDWRDP
ELMRDIELATGEDLGSSKTFGKGKKGKGKDKKKKYPNLSDLKKGVNTSRSRLGKKVFNPS
SMRRVTDVMNKMDKLKHAKFANQFNYALN
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgtactgtactggagttagtatcacttcaggtaaaaggatggaccacgcacaa
cgagataagttgtcagagctcgtggaagagttgaccacatctggggaaccacaactaaat
ccaaataaactgaaggaagtgaaaaagatatgcaaagtttccaacgactacattgagcac
ttctaccacctgaccatgacgcagctggcccaggagcatgccgagatccgcctgtcagcc
ttccagatggtcagtgagctcttcacccgctcacaccacttcagggtcctgctggtggac
aacttccaggagtttctggacctgacagtggagacagactcagatgagcctctgccacca
cccaaagaggtggctcgaaagctgaagaccattgccatcaaaactgtgcaagaatggcag
accacttacggagaagcctataagaaactggccttgggctaccactttctcaagcaggtt
aaaaaggtggactttcatgatgttcaggccagaacactagctgagaggaaacgagaggag
gagagacagaaaagactggagaggatttataaagacaaagttgaaaaggccaccaaggaa
atggaagatgcctcagaagagattgaagagtgtcttacagagataaacaactgcatgaag
ttgcttctgcctgcagagtttgacctcagtgacctagatacctcaactccagccaataat
tcaaccgcttctgtctcttctgtgcctaatgagaaggctagcacctccagtgacctagac
gaacagccctgttgtagtaaagacctggagctccagagggaacccaagaatccagagaca
agtacagcaacgaaaaccaatgaggagaaggaggaagaggatcctagtgatgaagacagc
gatatggaggatgttctggatgaagatgcattcatacgcaacacaggactcatatctcac
aaatacagcctggacctgaacctctccacagatttaaagttaaaggagacagaggaaaat
gaagcagtggtgaacaccatgaaggacctgcacaaactgctcagcactaaacacctgcct
gtcgtccagtactgggttcaggttttcaccaaggcgggtgtgccagaaccgctcctcaga
cgtgccatcgacttcaagtcgtcgctggagagagctctgcagaaacacgaagacctgcac
attgactacaaggccaggcatcgcagagtgatgaaagcgccggagggcagcgatgacgac
gatgatgactttgaagaggttccggagaaggagggttttgaaccccacattccagaccat
ctacgggaggagtacggtttagagccgtctacctctgtggccagtaagaagccggtgcag
cctcaagtgaagtgtcctgcaacaggagcctctcacaccctctccagacccaggaagaga
gccactgacgaggagcaggaccccacctgtgcagccgccacactccgcctcttcaagcag
cgcctcctaccccagccacctagcaccagctctgcagcaggaggtcatgtggaccccaca
taccaggctagtgaccccagtgaggagagggacaaagctccagtcatccccttcggtctg
gacctctactactggggagaggagcaacccactgcaggaaaaatcatcaagaatagctcc
cagcaccagttctgggttcccaacgaggtagaggaagaggtggagaataaggagctggct
gcccagatgaagtccaggtacatcacgttcgctggccgcttccagcccgtcaagcacagg
tgcaaaacccccatgcccaacggagccctctgtgaacgccaggaccgagtcaagtgtcct
ttccatgggccgatcatcccacgagacgagctgggaaaacccaccaacccagaggactct
gtgcggctggagaaagaggagtggaaacgtagagaggaccagcctgactggcgggaccct
gagctgatgagggacatagagcttgccactggggaggacctggggtcctccaaaaccttt
gggaagggcaagaaaggcaaggggaaggacaagaagaagaagtaccccaacctcagtgat
ctgaagaagggtgttaacacttcacgctccagactagggaagaaggttttcaacccgagc
tccatgaggcgagtgacagacgtcatgaataaaatggacaaattgaaacacgcaaagttt
gcaaaccaatttaattatgcactgaattaa
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