Salmo salar (Atlantic salmon): 106612075
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Entry
106612075 CDS
T04363
Name
(RefSeq) ATP-binding cassette sub-family A member 5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106612075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
106612075
Transporters [BR:
sasa02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
106612075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
106612075
NCBI-ProteinID:
XP_014068379
UniProt:
A0A1S3SVL3
LinkDB
All DBs
Position
ssa01:complement(95649193..95744452)
Genome browser
AA seq
1695 aa
AA seq
DB search
MYFIPIAPSCGERPHSCPRQLKHAGSNVSMQPNIIRRDAGVWHQTKSLLYKNLLIKWRTK
QQSLQELILPLLLLCLLILISTLNPHVYYGGISTMELEREDYHLLKGLGYTPINNATNHI
MEEVAQEMHLQDRLEMFSSEEDLENASLYEPSGYVGVVFMGSTPTSYRLRFPYNHLPLPS
DYTESIANCFASSVNCRAANYWYSGFIRLQTLIDAAIIQMQTKRSVWSEMDHLRVVMMGQ
PGSVEVQKFPHALISIYLVLAFTPFITFLIVNVAAEKEHRLKDTMTMMGLYDSAFWLSWG
LLYAALVTTMSILMSIIATYTALFPNSDFIVIFLLIFLYGISSIFFSFMLTPLFKKPKFA
STVGSMLTVVFGCLSLFTVLMKDFPQPLVWVLCLLSPSAFSIGIAQVVYLEAQGDGAVFT
TLANGPHPLYAPLLMLVLDCILYLLLAVYLDQVLPGEFGMRRSLVYFMKPSYWSKRSKRY
VEVSSVYETEVNGAPGVDESVEPVSPEFRGKEAIRINNIRKVYKEKDSIVEALRGLTFDI
YEGQITALLGHSGAGKSTLMNILCGICPPTDGHASIYGSPVAEIAEGAEMRQLVGICPQF
NIIFDVLTVEEHLRIFAAIKGILPSDIDNEVSKVLKDLDLEKIMDAQAKNLSGGQKRKLS
VGIAILGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKA
VISQGQLKCVGSSLYLKTKCGVGYHLRMSIGERCEVDGVTSLVKHHVLKAQLSRQQEAEL
TFTLPFESMDTFSGLFSELDCRPDLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQ
EQVEDEGDASSLDDTDQRLLTFSDSKPEAVQGHALWRQQFSTVAWLHMLNMQRERKAFVY
TLALFLVFLAAVLVLSLATGNIQIHAPERQFVPIYLLRPNQAPRKYTTSLLVQNSSGSDI
SDFIRNLESQDIKVEMMKNTDYMSCAPHSAAINVTGSNKGFRYSVAFNSTTVHSLPMTVN
VLSNAILRGLNGTQHIHTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTR
DREIKCRSTLRISGLVPSAYWCGQAAVDIPFYYLILTTMTSILFSFHTANLLTSGNVTAV
ILCLIGFGPAMILFAYVVSFMFTRVQSNRDFFSVVSMMVCVVSASIVQLSFVNDNPGLTR
ILHNTLCFFNPLYPLMGCLNSITKATFLPSLYEEDFLWKNLLIAVLSPYLQCILLLFMLR
WLEIRYGGRTMKNDQFCRISSKTKDKVERNPEEGINEDEDVQMEKARVKEALTCQCCEEV
CVCGHYEKPVVVVSNLRKQYKCPREGISLKKRRTVATKNISFCVRKGEVLGLLGPNGAGK
STIMHMLSGDTVPTAGQVLMGDYSTEFRPVDNPLEHIGYCPQVSPLWPRITLEEHLEIYA
AIKGLRGQDVPGIITRVVNALELKGHLHKQAKNLSAGIKRKLCFALSMLGNPQIVLLDEP
STGMDPKSKQRMWRAIRAAFKNRQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQH
LKGKYGRGYSLEVKLREELTGLQQVALLHKEIRRIFPHAARQESFATLMVYKIPMEDVKS
LAKSFSQLESAKQAFNFEEYNFSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQD
GPVPVNHTDSIVHQL
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctattgcgcccagctgtggagaacgtcctcattcatgccccagacag
ttgaagcatgctggtagtaacgttagtatgcagcccaacataatcagaagagatgccgga
gtctggcatcaaacgaaaagcctgctttacaagaatctactcatcaaatggaggactaaa
caacagagtctgcaggagttgatcctgccactgctgctgctgtgcctgctgattctgatc
agcaccctgaacccacatgtctactacggaggcatcagtaccatggagctggagagggag
gactaccacttactcaaaggcctgggatacacccccattaacaatgccaccaatcacatc
atggaagaggtggcccaggaaatgcacttgcaggatcgcctggagatgttctctagtgaa
gaggatctggagaatgccagtctttatgagccctcaggctacgttggggtggtcttcatg
ggcagcacacccacctcgtacaggttgcgcttcccttacaaccatctgcccctgcccagc
gactacactgagtctattgccaactgttttgccagctcagtgaactgcagagcagctaat
tactggtactctggcttcatccgcctgcagactctcatcgacgccgccatcatacagatg
cagaccaagcggtcagtgtggagtgagatggaccacctgcgtgtggtgatgatgggccag
ccagggtcagtggaggtccaaaaattcccccacgctctcatttccatctacctggtgctg
gctttcacacccttcatcaccttcctcatcgtcaacgtggcagcagagaaggaacacagg
ctcaaagacacaatgaccatgatgggcctctacgactctgccttctggctatcgtggggc
ctgctgtatgcagctctggtcaccaccatgtccatcctcatgtccatcatcgctacctat
acagccctcttccccaacagtgacttcatcgtcatcttccttctcatcttcctctacggc
atctcctctatcttcttctccttcatgctgacccctctgtttaagaagccaaagtttgcc
agtactgtgggctcaatgctgactgtggtgttcggctgcctgtccctgttcactgtcctg
atgaaggacttcccccagccgctggtctgggttctctgtctgctgtcccccagcgcgttc
tccatcggcattgcccaggtggtgtacctggaggcccagggggacggagctgtgttcact
accttggccaacggcccccatcccctctacgccccccttctcatgctcgtcctggactgt
atactctacctgctgctggctgtctacctggaccaggtcctaccaggtgagtttggcatg
cggcgctccctggtatacttcatgaagccatcctattggtccaagcgcagtaagcgctac
gtcgaggtgagctctgtctacgagacggaggtgaatggggccccaggagtggatgagtct
gtggagcccgtctctccggaattcagggggaaagaggccatccgcattaacaacatccgc
aaggtgtacaaagagaaggacagcatcgtggaagctctgaggggcttgacctttgacatc
tacgaaggtcagatcacagccctcctgggccacagcggagcggggaagtccactctgatg
aacatcctgtgtgggatctgccctccgaccgacggccacgcctccatctacggctcccct
gtggcagagatcgctgagggggcagagatgaggcagctggtgggcatctgccctcagttc
aacatcatctttgacgtgctgactgtagaagagcacctgaggatattcgctgccattaaa
gggattctcccctctgacattgacaatgaggtgtccaaggtgctgaaggatctagacctg
gagaagatcatggacgcccaggctaagaacctgagtggaggccagaagaggaaattgtct
gtgggcatagccatcctgggagaccccaagatcctgctcctggatgagcctactgctggt
atggacccctgttccagacaccaggtgtggtctctgctgaagagtcgcagagcaggcaga
gtcacggtgctcagcacacattacatggacgaggcagacatactcgctgaccgcaaagct
gtgatctctcagggccaacttaagtgtgttggttcttccctatatctcaagaccaagtgt
ggagtaggataccacctcagaatgtctattggtgaacggtgtgaggtggatggtgtcaca
tcattggtcaagcaccacgtcctcaaggctcagttgtcacggcaacaagaggctgagctg
acattcaccctccctttcgaaagcatggacaccttttcaggattgttctcagaactagac
tgcaggccagacctgggcatcatcaactacggggtgtccatgacaacgctggaggacgtg
tttcttcgtctggaggctgaggctgaggtggaccaggctgactacagtgtgttcaaccag
gagcaggttgaggatgagggtgatgcatcctctctggacgacactgaccaaagactactg
accttctctgacagcaagccagaggcggtccagggccatgctctgtggaggcagcagttc
agcaccgtggcctggctacacatgctcaacatgcagagagagaggaaggcctttgtctac
actctggcattgttcctggtcttcctagctgctgtgctagtattgtctctggctacgggg
aacatccagatccacgctccagaacggcagtttgtccccatctacctgctgagaccgaac
caggccccccggaaatacaccaccagtctactggtccagaactcatcaggctcggatatc
tccgacttcatccgtaacctggaatctcaggacatcaaggtggagatgatgaagaacaca
gactacatgtcctgtgctcctcacagcgcagccatcaacgtcaccggatccaacaagggt
ttccgatacagtgtagcgttcaacagtactaccgtccactctttgcccatgacagtcaac
gtcctcagtaacgccatcctacgaggcctcaacggcacacaacacatccacacctggacc
aagcccttcgactatcaaattcccgacgccacatcatatgctctggtctacattgaggct
atcatactggggatgctagctgcaggcatgcctgcctacttcgccatggaccacacccga
gacagagagataaagtgccgttcaacgctgcgtatctctggcctggtcccgtctgcgtac
tggtgtggtcaggctgcagtggacatccccttctactacctcatactgaccaccatgacc
agcatcctcttctccttccatactgccaacctgcttacctctggcaacgtcaccgcagtg
atcctgtgtctgataggttttggcccagctatgatcctgttcgcctacgtggtgtctttc
atgttcacacgcgtccagagtaacagagacttcttctctgtggtctccatgatggtgtgt
gtggtgtctgcctccatcgtccagctgtcatttgtgaacgacaaccccgggctgacgagg
atcctccacaatacactatgtttcttcaaccctctctaccccttaatgggctgccttaac
tctatcaccaaggccaccttcctgccctccctctatgaagaggacttcctctggaagaac
ctgctcattgctgtcctatctccctatctgcagtgcatcctgctactgttcatgctgcgc
tggttggagatccgctacggagggaggaccatgaagaatgaccagttctgcaggatctct
tccaagactaaggataaagtggagcgtaacccagaggaggggatcaacgaggatgaagat
gttcagatggaaaaggctcgggtgaaggaggccctcacctgccagtgctgtgaggaggtg
tgtgtgtgtggccattacgagaaaccagtagtggtggtgagtaacttgaggaagcagtat
aaatgtccaagggaaggaatctctctcaagaagaggaggacggtagccaccaagaacatc
tccttctgtgtacgcaaaggtgaggtgcttggactgctggggcccaacggagcagggaaa
agcaccatcatgcatatgttgtctggagacacagtcccaaccgctggacaggtcctgatg
ggggactacagtacagagttccgtccagtagacaaccccctggagcatataggctactgt
ccccaggtcagccctttgtggccccgcatcaccctggaagaacacctggagatctacgct
gccatcaagggcctccgcggacaggacgtccctggcatcatcacacgtgtggtgaatgct
ctggagctgaagggccacctccacaagcaggccaaaaacctctcagctgggatcaagagg
aagttgtgctttgctctcagcatgttggggaaccctcagatagttctgctggacgagcct
tctacagggatggaccccaagtccaaacaacgcatgtggagggctatccgggcagcgttt
aagaaccgccagcgtggggccattctgaccactcactacatggaggaggctgaggctgtg
tgtgaccgcgtggccatcatggtgtcagggcagctcaggtgtattgggtctatccagcac
ctgaaggggaagtatgggcgtggctacagcctggaagtgaagctgagagaggagctgaca
gggcttcaacaagtggcactcctccacaaggagatccgtcgaatcttccctcacgctgca
agacaggagagctttgccaccctgatggtttacaagatccccatggaggatgtcaagtca
ctggccaagtccttctctcagctagagagtgctaagcaagccttcaactttgaagagtac
aacttttcacaatcaaccttagagcaggtcttcatggagtttgctaaggagcaggagaac
gaggaggaagaggtgggttccctcagcaccacgttccagtggcagcggctccgccaggac
ggccctgtgcctgtcaaccacacagacagcattgtgcaccagctctga
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integrated database retrieval system
