Salmo salar (Atlantic salmon): 106612144
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Entry
106612144 CDS
T04363
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106612144
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106612144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
SH3_9
TPR_8
SH3_2
SH3_1
TPR_10
TPR_MalT
TPR_19
Motif
Other DBs
NCBI-GeneID:
106612144
NCBI-ProteinID:
XP_014068533
UniProt:
A0A1S3SW13
LinkDB
All DBs
Position
ssa09:79669395..79726597
Genome browser
AA seq
1676 aa
AA seq
DB search
MAWCCCTPLRASSSSCCSPLLKRCPLFPDISPAELDALWREPPYTLAGTNEHFTGNDVTN
RGEEEGPGVESGEGEVELDSYWTRKEAFTRGSTVSLAMGERFSSDVVLVFSGRRCSGVIP
DSELQEALRTRLRVVESNSQDVIQLFKDLSARLLSVHAEKDSFVITFKTVEEMWKFSTYL
ALGYVARCLENFLCDQSFWLDTELLRDLEITVTVDEEHLATLYLGLLLQEGSFFAKALVS
SGEHSDEEEELCFRRNDLLMVRDTGQDSHWEGTLLSTGQHGLVPVNTMQPLPYPFYQWFL
RKHSDCAGCSPSERGQFDHPIVTGSCEAVVDHNPVGSDELQLSQGDLIEIEGMLLRGLDL
FIGTHCSTGNTGFVHKAHVKPLNAKPLDGQLVFLSEEERASMAQINPCSSEPRDSGLLER
LFSSDISTVYRLDRLDQSDFTYIRNQPKQEHKPPASARQSIISEKSDATPPYHSSPRPSL
SHSSPRPSFYASQNALGRGGDGELLSFSLDDTFREMNEFQEDPALFLEEGSWEGVESEVC
DPTLTLLNMHHFQEDFLPLYDLNHSFLWLTFSGQSEDELLGHLEVVREGAKRTGMAWAHR
RACFLLGRLCAKKLKYSQARVYYEEALGVSVDGFSDLPLLIALYTNLTAIYLKQKMADKL
PPTLEKASALLLCLPRHTFTSLDEFELLKLVLRRSVVEGDKHLEARVCYLTASLFLLLRK
IDDALPFVERLQFLTVTLSAEEGRPIAPLDLNWLLSRLYHRKYMPYLALASLSLDSGQDH
SLQDAFHRIELFSRNSVRLNPRWKEGTSLLPAQIVVYLQQALAIAERGEDLKTQRDLCLG
LACVYQQHGALVKALPCAQQAVQTGGGINEEEGFEASVLLGWLLVLTGQPERAQNTLQPL
LQSLQGTDSPTQVGVVHNLLALCLRRQGHIPEAGSHLHHALTISRESGNQRNQALALANL
GCLALGVGAPTLAEGFLFRSLWLFLEIWESPVDEEHVQTYLWLGRSYKDRGRSQDVRLCY
EMGLLISLQARNLHSQMVVAKVLSRHYADMLLYGQSILYYEHCVSVSRDLKDKRLEGEYL
EILSSLYLSLNTEKSSRKSLDYSKQSLRISIDLGKREEESETWLQVGRIYYLIHEDELAD
MYLQAAVKTALRMNDPRFAMSIYEEAGDIFFKGHRNKLASLPFYRDGSLPFARSIHDVHS
EFRLLSKLTELLMTQEEHDEALQYAILAVQISTKTGVCVNERAAYHRLATVYYSLEQYEM
TENYYLKSLSLSPAVLQHPLEARYYTKLYCRLGDMTLHKLKDTYDSVGYFQLALAAALED
RGNPQALYVVYMKLAEIHANHMPDPLLCQAYRDRAQSLRRELSGLEEMDGREGETEEWRG
EMEGRGGEMEMEGREETEGRGEETEERGGVTCDTDLETRNTDMETEPETGYSEHTDTIPK
EAIDMDSARSLRLEPAGRQDMEGRDTEGQHTGLGDMERGDTEGQHTGLGDMERGETEIGH
PDTTEKQHPVTENRETETECGDSIDAEANSKDANCKDSSHTNADSHEADSDVFKGDRETS
NSNPEKILPEATHTDQDTDSTDTSPCQADVEHIQNDYTTTSSAFVDTTITEDTDSIDRIP
CDPNNTETMPTDTCIKHSDSTATDTDTDTPYKDSPTDSSHTDTDTDIDSSQRQTQR
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtgctgttgcactcctctccgggcctcctcgtcctcctgctgctctccgctt
ctcaaacgctgccctctcttcccagacatctcccctgctgagctggatgcactatggagg
gaaccaccgtacacgctagcgggaaccaatgagcacttcacaggaaatgatgttacgaat
cgaggggaggaggagggtccgggggtggagtctggagaaggggaggtggagctggacagt
tactggacaaggaaggaggcgttcaccagaggaagcaccgtgtcactggccatgggagag
aggttctcctcagacgtggttctagtgttcagcggtcggcggtgctcaggtgtaatacct
gactctgaactacaggaagcgctccgtaccagactcagggtcgtcgagagcaacagtcag
gacgtcatccaactcttcaaggacctgtctgcccgtctgctgtctgtccacgctgagaag
gacagctttgtcatcaccttcaagactgtagaggagatgtggaagttctctacctacctg
gctctgggctatgtggcgcggtgcctggagaatttcctatgtgaccagtcattctggctg
gacactgagctactgagggacctggagatcactgtgactgttgacgaggaacacctggcc
acactctacctgggactgctgctgcaggagggttcgttctttgccaaggcgctggtgagc
agtggtgagcatagtgatgaggaagaggagctgtgtttcagacgtaacgacttgctcatg
gttagagacacggggcaggacagtcactgggagggcacccttctctccaccgggcaacat
ggactagtgcctgtcaacaccatgcagccgctgccataccccttctaccagtggttcctg
aggaagcactctgactgtgccggatgctccccttcagagagaggacaatttgaccaccct
atagtaaccggatcctgtgaggctgtagtggaccacaacccagtaggttctgatgagctc
cagctgagtcaaggtgacctgattgaaatagaggggatgctactccgaggtctggacctg
ttcataggaacacactgctctacaggaaacaccggcttcgtacacaaggctcacgtcaag
ccactcaatgccaaaccactagacggacaactggtgtttctgagtgaggaggaacgtgcg
tcaatggcccagattaacccctgcagtagtgaacccagagacagcggcctcctagagaga
ctcttctcctctgacatcagtactgtctacagactagatagactggatcagtctgatttt
acatacatcagaaaccaaccaaaacaagagcataagccccccgccagcgcccggcagtcc
atcatctcagagaagagtgacgctacacccccctaccactcctccccccgcccctccctc
tctcactcctcgccccgcccctccttctacgcctcccagaatgctttggggcgtggcggt
gacggggagttgctgtccttcagtctggacgacaccttcagagagatgaatgagttccag
gaagacccggcccttttcctggaggaggggagctgggagggggtggagtcagaggtctgt
gacccaaccctgactctgctcaacatgcatcacttccaggaggacttcctgcccctctat
gacctaaaccactccttcctgtggctgacgttctcaggacagagtgaggatgagctactg
ggccatctggaggttgtcagggagggggccaagagaacgggcatggcctgggcacaccga
cgggcatgcttcctactggggaggctctgcgccaagaagctcaagtactcccaggcccgt
gtgtattacgaggaagcccttggcgtctctgttgacggtttctctgacctccctctcctc
atcgccctgtacaccaacctcacagccatctacctcaaacagaagatggccgacaagctg
cccccgaccctggagaaggccagtgctctgctcctctgtctccccagacacaccttcacc
tccctggatgagtttgagctgctgaagctggtgctgcggaggtctgtggtggaaggggac
aaacacctggaggcacgggtctgctacctcactgccagcctcttcctcctccttagaaag
atagatgacgccctgcccttcgtggagcgtctccagttccttactgttaccctgtctgct
gaggagggacgccccatcgcccccctggacctcaactggctcctgtcccggctctaccac
cgtaaatacatgccctacctggccctggcatcactcagcctggactctggacaggaccac
tcactacaggacgccttccacaggatagaactgttcagcaggaactcggtgcgtctgaat
ccgcgatggaaagaggggacgtcccttctccccgcccagatcgtggtgtatcttcagcag
gctctggccattgcagagcgtggtgaggaccttaagacccagagagacctgtgtctgggc
ttggcctgtgtgtaccagcaacacggcgccctggtgaaggccctgccctgtgcccagcag
gctgtacagaccgggggaggtatcaacgaggaggaggggttcgaggcttcagtactgttg
ggatggttgttagtcctgacgggacagcctgagagggcacagaacaccctacagccacta
ctgcagtctctacagggaaccgacagcccgacccaggtgggagtggtccacaacctgctg
gctctgtgtctgcggcggcagggtcacatcccagaggccggcagccacctccaccacgcc
ctcaccatctccagggagagtggcaaccagaggaaccaggccctggccctcgccaacctg
ggctgcctggcactgggcgtgggggcacccacactggcagaaggattcctatttaggtct
ctgtggttgttcctggagatctgggagagtcccgttgacgaggagcacgtccagacctac
ctatggctggggcggagctacaaggacagggggaggagccaggacgtcaggctgtgttat
gagatgggcctcctcatatccctccaggccaggaacctccacagtcagatggtggtggct
aaagtcctgagtcgtcactatgctgacatgctgctgtatggacagagtatcctctactat
gagcactgtgtgtctgtgtccagggacctgaaggacaagagactagagggagaatatcta
gagatcctcagcagcctctacctctccctcaatactgagaaatcatcaaggaagtctctg
gactacagtaagcagagtctgcgtatctccattgacctggggaagagagaggaagagtca
gagacgtggcttcaggtgggacgcatctactacctcatccatgaagacgaactggctgac
atgtacctacaggcagcagtgaagacagccctgaggatgaatgaccctcgcttcgccatg
agtatctacgaggaggcaggagacatcttcttcaaaggccacaggaacaaactggcatca
ctgcccttctacagggacggaagtctcccgtttgctcggagcatccatgacgtccactca
gagttcagactgctgagtaaactgactgaattactgatgacccaggaagagcatgacgag
gctctacagtacgccattctggctgtacagatcagtaccaaaacaggtgtgtgtgtgaac
gagcgcgcagcgtaccaccgcctggctacggtgtactacagtctggagcagtatgagatg
acagagaactactacctcaagtctctgtctctcagccctgctgttctgcagcaccccctg
gaggctagatactacaccaagctctactgcaggctgggggacatgacgctgcacaaacta
aaggatacctatgactcggtgggctacttccagctggctctagctgctgccttggaggac
cgtggcaacccacaggcgctatatgtggtctacatgaagctggcagagatccatgccaac
cacatgccagacccactgctctgccaggcttacagggacagggcacagagcctgaggagg
gaactctctgggctggaagagatggatgggagggaaggagagacagaggagtggagagga
gagatggagggcagaggaggagagatggagatggagggaagagaagagacggaggggaga
ggagaagagacagaagagagaggaggagtgacatgtgatacagacctggagacgagaaac
acagacatggagactgagccagagactggatacagtgagcatacagatactatccccaaa
gaggctattgacatggacagtgcacgtagcctgaggttggagcctgctggacgacaggac
atggaggggagagacacagagggacaacacacaggacttggagacatggagaggggagac
acagagggacaacatacaggacttggcgacatggagaggggagagacagagataggacac
ccagacactacagagaaacagcatccagttaccgaaaatagagaaacagagactgaatgt
ggtgactctatcgatgcagaagcaaattccaaagatgctaactgtaaggatagcagtcac
accaatgcagatagccatgaagccgattctgatgtgtttaaaggagacagagaaaccagt
aattcaaatccagaaaagatcctcccagaggctactcacacagaccaagacactgacagt
acagacacaagcccttgtcaagcagacgttgaacacatacagaatgactatacaacaaca
agcagtgcatttgtagacactacaataacagaggacactgacagtatagacagaatacct
tgtgaccctaacaacactgagactatgccaacagacacatgcatcaaacatagcgattca
acggccacagacacagatacagacacaccctacaaagacagccctacagacagcagtcac
acagacacagatacagacatagactcctctcaaagacagacacagaggtaa
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