Salmo salar (Atlantic salmon): 106612156
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Entry
106612156 CDS
T04363
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04114
Oocyte meiosis
sasa04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
106612156
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
106612156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106612156
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106612156
Factors involved in mRNA localization
Trans-acting binding proteins
106612156
mRNA cycle factors
P-body specific factors
106612156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
106612156
NCBI-ProteinID:
XP_014068557
UniProt:
A0A1S3SW55
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Position
ssa09:80588357..80601772
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AA seq
749 aa
AA seq
DB search
MDDYGFGVLVKNNCSGNKSAFPVRIPPHLQPQPSHLNHPANPPSPPSFINSTSATNGGGS
AWLFPSVTPHSNMQDEILDSDKAKALDLQEKAQPQALSPGQQEAGGGLGELDGSLPEDCS
MEKGSLESSGGKEKLRGGMDSPPVLGGFDYQDSLGMATSGAQSTTTTSSLTSFNNWSPTV
PSNPSPVVSEDVGSGFFGPAGSNANGPPMLFQNFSHHAGPGFGGVGGSYSPQIGPVSQHH
PSPHPHHYHPHNQGVPPQHRRSPASPHPPQPSFPPHPHRSGAFTQLPHLAPAQSKPPSPW
GSYQSPAPSTPTSTSWSPGVGYGGWGGSQAVREYRRGLNGGVTALNSISPLKKSFPNNQV
PSQKYLRNNSGFNHKAWMEDSMSRTDNFPFQERTRSFDGFSMHSLENSLIDIMRAEQDSL
KGRYGFSHQGGDVSLPMNARSYGRRRGHSNLFPMGDEHSFGEDESGDQGLPGLGSAHCFP
QLNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFL
LFQDETSVQDLIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRK
TIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAIS
ARFVQLQHGEMDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAA
IHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacggcttcggagtcctggtgaagaataactgcagtggcaacaaatctgct
ttccctgtgaggatccctcctcacctccaaccccaaccctcccacctcaatcatcccgcc
aacccccccagccccccttcattcatcaatagcacctcggccaccaatggaggaggtagc
gcctggctgttcccctccgtaacaccccacagtaacatgcaggatgagatccttgactcc
gacaaggccaaagccctggacctgcaggaaaaggcccagccgcaggccctctcccctggg
cagcaagaggccggaggtggcctaggggagctagatgggtctctacctgaggactgctcc
atggagaagggctcattggagagcagcggtgggaaggagaagcttaggggtgggatggac
tcccctccggtgctgggggggtttgactaccaggacagcctggggatggcgacgtctgga
gcccagtccaccaccactacctcctccctgacctccttcaacaactggtccccgaccgta
ccctccaacccctcccccgtggtcagtgaggacgttgggagcgggttctttggcccggcc
ggttccaatgctaacggacccccaatgcttttccagaacttctcccatcacgccgggccc
ggctttggaggggtggggggtagctactccccccagattggccctgtctcccagcaccac
ccttctccacacccccaccactaccacccccacaaccagggggtccccccgcagcaccgc
cgttccccagcctccccccaccctccccagccctccttcccccctcacccccaccgctct
ggagctttcacccagctgccccacctggccccggcccagtcaaagcccccctccccttgg
ggcagctaccagagccctgccccctccacccccacttccacatcctggagccctggagtg
gggtacggtggctggggagggtcacaggcggtccgagagtaccgcaggggcctcaacgga
ggggtgacggccctcaactccatctcaccactaaagaagtctttccccaacaaccaggtt
ccctctcagaagtatcttcgtaacaactcagggttcaaccacaaggcttggatggaagac
agcatgagtcgcactgacaacttccctttccaggagagaacccgttcctttgatggcttc
agcatgcactccctggagaacagtctgattgatattatgagggctgaacaggattccttg
aaaggtcgctatggtttctctcaccagggcggagacgtgtctttgcccatgaatgctagg
agctatggcagacgacgaggtcactctaacctgttccccatgggggacgagcactccttc
ggagaggacgagtcaggtgaccagggacttcctggtttaggatccgcccactgtttcccg
cagctcaatggagagcgagtggagaggtattcacgcaaggtgtttgtgggaggactgccc
cccgatatagacgaagatgagatcactgccagtttccgccggttcggtcacctgtttgtc
gattggccccacaaagctgagagcaagtcctatttcccacccaaaggttatgcattcttg
ctgttccaagacgagacctctgtccaggatctgattgatgcctgtattgaggaggatggc
aagctctacctctgtgtctccagccccaccatcaaggacaagcctgtccagatccgtccc
tggaacctgaacgacagtgactttgtgatggacggctctcagcctctggaccccaggaag
accatctttgtagggggggtgccacgtcctctacgcgcagtggagctggccatgataatg
gatcgtctgtatggaggagtgtgttacgctggcatcgacacagaccctgagctgaagtac
cctaaaggagcgggccgtgtggcattctccaatcagcagagttacatcgctgctatcagc
gctcgattcgttcagttgcagcacggcgagatggacaaacgggtggaagtgaagccatac
gtgctggatgatcagctgtgtgatgagtgccaggggacacgctgtgggggaaagttcgct
cccttcttctgcgctaacgtcacctgtctccagtactactgtgagtactgctgggcagcc
atacactcccgggccggacgagagttccacaagccactggtcaaggaggggggagaccgg
cctcgacacatatccttcaggtggaactag
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