Salmo salar (Atlantic salmon): 106612286
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Entry
106612286 CDS
T04363
Name
(RefSeq) matrin-3-like
KO
K13213
matrin 3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106612286
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106612286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
Motif
Other DBs
NCBI-GeneID:
106612286
NCBI-ProteinID:
XP_014068789
UniProt:
A0A1S3SWS8
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Position
ssa09:88485090..88498666
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AA seq
1186 aa
AA seq
DB search
MSQKIPSDSSQKGFAVGRGLLAAAETLNFSMNEQRSDSLHHGSTSRQLHSMSSGMGGGEG
DRDPQLSRRGGGSHIGNSMKLFASLGLSPADLDMLAQIPEDNISVETLPHLIMQLKNRKV
ESDRRMAGNSRGDLSGLSSETSYRASRDDWDDMRVGKLGGSMGQASGHAQQGDLGYSSIQ
DTSAGRYELDYGHGSGGRDPGWYSDLSHDRYSGMGMGPPSAADSVFMTRRMGSPSQGKVQ
DFLGVIPHMFPHVCSLCDFDVHSTMEWNQHTDGLRHTENQRLLLQMYPEWDPHMATSRSS
GSHLLETTNQSAGLLGPIPMAERQQAGGGRMNSGWGGGAGSNVGSGKPHQHSMALKQIRS
KVVVAKYDSSPLSNKALFALVEPFGTLCEHLVLKNKAFLEMETHKEARDVVSYYQQNPAV
LYGKQITCYLSKELMVIQKDSRTERINREAKQGKEPAAANQSQVVFFSNLPRENEKKQEL
LTIARRFGTVEKHLFLTDESFVQLGSAEDAEMLVKYYTLNPLTIQGKSVRLNICTKYKTL
NVSNRSNKLMDDKRRRSSSSTGPKDKGSSSRSAKSSSSSKAKEDKKEPPKGEDSGAEGEG
SGGEGSGRGDEVAGVMEGDEAEECKGEGDQGSRDDGPSEDKAEAVTEDPETAANTSLESQ
EEKEPAPDSDNVPSTAKVLSSSHVTEKAEGSEVEGTVPGPEEKAEGEPESEQMETEATTD
EPETEDKDDMPSAEPAESLEMHEEQLPADQEEGSMEQDFPENMDDFVTLDELAEDEDLER
QDSSSKEKYSSSGSSKKIGGLRVVNVVGFKRAYGFLNEILALAKPFGTVVQHLVLDVRPE
AFLQLNSEEEAKAMVNFYSGNVTPTVCGKSVKIYHSQTYATIQSGRVVYVGQIPHFKSSD
ASLLKIAEPFGKVRRYFLNRSRNECFIEMERGEDAERMSETYKDTPPKFEGKRLTVYVSR
KYKQLKYGHRPPAPDSEEKKRPSKRERSGSETSSHRSSAAKSSAKQDEEPPVKKSREETA
SSSADEPEKEDKEEMVETPTEQSEVEVRKEEDVVQGEHSQPSETSAVHKIDTDMNIKMEE
NETAISIVNVRSVEENGETASIPSQAEGKLSSTSPVPLGPYEPNNPVGVEYVKMGYYCRV
CFLFYSNEETAKKVHCSSQSHYQKLMKHLEKEKAKAQSTTGTKTPV
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaagattccatctgatagctctcagaaaggctttgctgtgggacgcgggctc
ctggctgctgctgagaccctcaacttcagcatgaatgaacagcgttcagacagtctccat
catggctcaacctccagacagttgcacagcatgtcctcgggtatgggtggtggtgagggt
gaccgtgacccgcagctgtcccgtcgtggtggcggcagccacattggcaactccatgaag
ctgtttgccagcttgggcctgtcgcccgctgacctagacatgctggcacagatcccagaa
gacaacattagtgtggagaccttgcctcaccttataatgcagcttaagaaccggaaggtg
gagtctgacagacgcatggcaggcaactctagaggggacctgtccggcctctcctctgag
acctcatacagagccagcagagacgactgggatgacatgcgtgttggcaaactgggtggt
tccatggggcaagcttcgggccacgctcagcaaggagacttgggctacagttccatccaa
gacacttcagctggaaggtacgaactcgactatggccacggcagtggtggaagagatcca
ggctggtattcagatctttcccatgatcgctacagcggtatgggcatgggtcccccctca
gcggcagatagtgtctttatgaccaggagaatgggttccccgtcccaaggcaaagtgcag
gacttcttaggagttatacctcacatgtttccccatgtgtgctctctttgtgattttgac
gtgcattctaccatggagtggaaccagcacacggatggattacggcatacagaaaaccag
aggctcctcctgcaaatgtacccagaatgggatccacacatggccacaagcagaagcagt
gggtctcatctactggagaccaccaatcaatcagccggtctcctgggaccaatccccatg
gctgaaaggcagcaggctggaggagggcgcatgaactccggctgggggggtggtgctgga
tctaatgttggatcaggcaagccacatcaacactctatggcacttaagcagatcagaagc
aaagtagtggtggctaaatatgacagtagtcctctgtctaacaaagccctgttcgccctg
gttgaaccctttggaactctctgtgaacacctggtactgaagaacaaggcctttttagaa
atggagacccataaggaagctagggatgtggtgagctactaccagcagaacccagcggtg
ttgtatgggaaacaaatcacttgttatctgtccaaggaactcatggtgattcagaaagac
agcagaactgaaagaatcaaccgggaggcgaaacaaggcaaagagccagcggcagcgaac
caatcgcaggtagtcttcttctccaacttgccgcgtgagaatgagaagaagcaggaactc
ctcaccatcgcgcggcgcttcggaaccgtggagaaacacttgtttctaacagatgagtct
tttgttcagctggggtctgcagaggatgctgagatgttggtgaagtactacactctgaat
ccactgaccatccagggaaagagtgtccgcttaaacatctgtaccaagtacaagacctta
aatgtgagtaatcgctccaataaactgatggatgacaagagaaggagaagcagcagtagt
actgggcccaaagacaaaggttcctcctccagaagcgctaaatcttcctctagcagcaaa
gccaaagaggacaagaaggaaccaccaaaaggagaggacagcggtgcagagggagaaggg
tcagggggagaagggtcagggagaggtgacgaggtggctggtgtgatggagggagatgaa
gctgaggagtgcaaaggagagggagaccagggttcacgtgatgatgggccgtcagaggac
aaggctgaagccgtgacggaagacccagagaccgctgccaacaccagtctggaatcccag
gaggagaaggaacctgctccggactctgacaatgttccgagcactgcaaaggttctgagc
agtagtcatgtcactgagaaggctgaggggtcagaggtggaggggactgtccctggtcca
gaggagaaagcagagggagagcctgagagtgaacagatggaaactgaagccactacagat
gagccagagaccgaggacaaggatgacatgccgtcggcagagccagcagagagcttagag
atgcatgaggaacaactacctgcagatcaggaggagggcagcatggagcaggatttccca
gagaacatggatgactttgtgactctggatgagctggcagaagacgaggacttggagaga
caggactcctcatccaaagaaaaatactcatcttcaggaagctctaagaaaattggggga
ttgagagtggtcaacgttgtgggatttaaacgagcctatggttttctgaacgagatcttg
gccctggccaaacccttcggtacagtagttcagcacctggtgcttgacgtgagacctgag
gcctttctgcaactcaattcggaagaagaggcaaaagcaatggtcaatttctacagtggg
aatgtaacaccaactgtgtgtgggaaatctgtgaaaatctaccattcacagacatacgct
accattcagagtgggagagtggtatacgtgggacagattccacacttcaaatcctcagac
gcctctcttctgaaaattgctgaaccattcggcaaagtgagacgctattttctgaacaga
tctcgcaacgagtgtttcattgagatggaacgtggagaggacgctgagagaatgtctgag
acctacaaggacacgccccctaaattcgaaggcaagcgactaacggtgtacgttagcagg
aagtacaaacagctcaaatacggacaccgaccaccagcccctgactctgaggagaagaag
aggccgtcaaagagggagcgatcaggcagtgaaacaagctcccacaggagctcagcagcc
aaaagctcagccaagcaggatgaagaacctccagtcaagaagtccagagaggagacggca
tcctcctcagcagacgagcctgagaaagaagacaaggaggagatggtggagacgcccact
gagcagagtgaggtagaggttaggaaggaagaggacgtggtccagggagaacatagtcaa
ccctctgagacctcagctgtacacaagattgacactgacatgaacatcaaaatggaggaa
aacgagactgccatttccatagtgaatgtgaggagcgttgaggagaatggcgagactgct
agcataccatcccaggctgaggggaagctttcatcaaccagtcctgttcctctggggcct
tatgagcctaacaacccagtgggtgttgaatatgtgaagatggggtactattgtcgagtc
tgtttcctgttctattccaatgaggagacagccaagaaggttcactgcagcagtcaatct
cactaccaaaaactcatgaaacatctggaaaaggagaaggccaaagctcaaagtaccaca
gggacaaagactcctgtgtag
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integrated database retrieval system
