Salmo salar (Atlantic salmon): 106612292
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Entry
106612292 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106612292
04120 Ubiquitin mediated proteolysis
106612292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106612292
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106612292
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106612292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
FANCL_C
Motif
Other DBs
NCBI-GeneID:
106612292
NCBI-ProteinID:
XP_014068797
UniProt:
A0A1S3SWT5
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Position
ssa09:88688788..88702699
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AA seq
613 aa
AA seq
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MVRAALVTATSLALTGAVIAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPANAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAAGAPEAAQTQGAGTTGASTVGAAP
APGGPMPGFPFPSFPPPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEAELRELEQEG
RRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLIPPQSETSSAAGEASESSPPSTSAE
TQEKDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQRDGEEGDGEEVGEPNPSELRRRR
LHKLETTPPPPDH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagccctggtgactgccaccagtctggctctgactggcgcagtgattgcc
catgcctacttgctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaagtcttcttcggacagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttaccgtgtttagagatgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatttcctgggtcttccacttcagg
gtgttctctctgatggtgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggcgcctctgtccaactggtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggataacaaagcagtctacatgctctacacagagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggcgatgaggcagttcaagaaagctgttacg
gatgcaataatgtcgcggcgagccatccgcaacatgaatacactttacccagatgccacc
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagaaatggtgact
ggagccaagaaacttccttgcaaccatatcttccacgcaagttgccttcgttcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctcgaaccccaac
cagcctcccgccccagcccctgcccagcctcctgccccagcagcacctgccaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctggggccccttccctggagcggccccccctgctggtgctgctggggcccca
gaggcagctcagactcagggagctggcaccactggggccagtacagtcggtgctgctcct
gctccaggaggccctatgcctgggttccccttcccctctttccctcccccaccgttcccc
tcggctccatggctgactatgccaccaccacctccaccgtttgtgtcatccatgccccct
cctcccccggccctgtccaccatgtcagaggctgagctgagggagctggagcaggagggc
cgtagaggcctggaggccagactgcagtgtctccacaacatccacactctactggacgct
gccatgctcaacatcgaccaatacctcactaccgtcgccacactcattcctcctcagtca
gaaaccagcagtgctgctggcgaggccagtgagtcatctcctccctccactagtgcagag
acccaggagaaagactctcagagcagtacagccgctgaacctgaagctgtgaatggggcc
acaggtttctcccagccagactctaccacgttgggcgacagtgaagaccagagggatgga
gaggaaggagatggagaggaagtcggagagcccaacccttcagagctgaggcgccgtcgt
ctccacaaactcgagaccacaccccctcctcctgaccactaa
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