Salmo salar (Atlantic salmon): 106612293
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Entry
106612293 CDS
T04363
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106612293
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106612293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106612293
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106612293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
Beta-prop_SCAP
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
106612293
NCBI-ProteinID:
XP_014068803
LinkDB
All DBs
Position
ssa01:complement(94744686..94749338)
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AA seq
214 aa
AA seq
DB search
MCEQLRGRGAKMSYGRPPPDVEGMSSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDR
YTKESRGFAFVRFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGSGPP
RRHGGYGRRSRSRSASPRRRRRSRSRSRNRSRGRDYSRSRSRSYSRSRSKSRTPRKSKSP
SRSRSRSRSPASNRGSRSRSKSMPKSPDDNGTES
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagcagctgagaggacggggagcaaagatgagctacggaaggcctccgcccgat
gtcgagggtatgtcctcgctcaaagtggacaatctcacgtaccggacctcgcctgagacc
ctacgccgagttttcgagaagtatggccgggtgggagacgtgtacatcccccgcgatcga
tacaccaaggagagccgcggtttcgcctttgtgcggttccacgataagcgcgacgctgaa
gacgcgatggacgccatggacggggccttgctcgacgggcgggaactgcgagtgcagatg
gcgcgatatggccgtccaccagactcccacttcgggcgccgaggcggcagtggaccccca
aggaggcatggaggctacgggcgcaggagcaggagtcgttcggccagcccccgccggcga
agacgcagtcgttcccgaagcaggaaccgcagtcgtggccgtgactacagccgctcacgg
tctcgttcctactctagatcccgttccaagtcccgcacaccccgcaagagcaagtcccca
tcccgatcaaggtcccgcagccgctccccggcttctaacagaggctcaaggtcgaggtcc
aagagcatgcccaaatcccccgatgacaacggaaccgagtcttag
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