Salmo salar (Atlantic salmon): 106612320
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Entry
106612320 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106612320
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106612320
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106612320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
106612320
NCBI-ProteinID:
XP_014068841
UniProt:
A0A1S3SWW5
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All DBs
Position
ssa09:complement(89837331..89843865)
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AA seq
711 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPVSSL
LGEITAEELLSRLQQIKDGPEQQQQPSINTSETGEATGELAEGPEDPSNGDTLLDWLNTV
RRTGNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEGEAQAMEEAP
TRAPGNGVEVQPEAGMVAPMETGEVLEEPVVEELAVIVEPEAEMEPEPEAEVEAEPELEV
EMVPELVVEVVPQPPSPVTTTPPVSRPASPLVQAPPVTPAPAPPSPPPEEPPRRGQRRAR
SRSPEQRRTRARTTRSRSPLTLDRLDGLPRQVPTAATSHSPATQAPAEGSSRTRQHVLSR
QSTAEYEAQSAGTGFDTGSGNAPEPVTTPPQEGEAAGGEGAAGRRPPTIMLDLQVRRVRP
GEYRQRDSIANRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRIS
DAGLGEATSMALQTMIRQIMTGFGELSYFMDSDSDSSDSNRGAGNPSGAADLAEALNTPE
GGVAGMAEGAEPPVSVSGHSMGGAGEARTEEGEGEDGIGLGLAPGIGLGVGGTTREGRAR
PRAPISLEEPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVC
ITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcagcgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccagtttcatccctc
ctaggtgagatcacagcagaggagttgttgagtcggttgcagcagattaaggatggacca
gagcagcagcagcagcctagcatcaacaccagtgagactggagaagctacaggagaactg
gcagaaggtccagaggacccttctaacggtgacaccctcttggattggctgaacactgtc
aggcggacaggcaacaccacccgcagtggtcaccgaggcaaccagtcgtggcgggcggtg
agccggaccaacccaaacagcggagacttccggttcagtctggaaatcaacgttaaccgt
aacctggccgagcaacaggcccgcgcggagggggaggcgcaggcgatggaggaggcccca
acaagagcacctggcaatggggtggaggtccagcctgaggcggggatggtggcgcccatg
gagacaggagaggtgctggaggaaccagttgtggaggagctggctgtcatagtggaacca
gaagcagagatggagccagagccagaggctgaagtagaagctgagccagaactagaagta
gagatggtcccagagttagtagtagaggtagtcccacagccacccagccctgtcaccacc
acccctcctgtctccagaccagccagtcccctggtgcaggcccctccagtcaccccggcc
cccgcccctcccagccctccccctgaggagcctccacgacgtggccagagacgagcccgc
agccgtagccccgagcagcgccggaccagggctcgcaccacacggagccgttcccccctc
accctggaccgactggacggcctcccccgccaagtgcccaccgcagccacctcacacagc
cctgccacccaggcacccgcagagggaagctcacggactcgacagcatgttctgtcccgg
cagagcaccgcagagtacgaggcccagtcagccggaacagggtttgacacaggttctggg
aacgccccagagcccgttactaccccaccccaggagggagaggccgcgggcggggaggga
gcagcaggacgacgtccccccaccatcatgctggacctgcaggtgcgtcgcgttcgtcca
ggtgagtaccgccagagggacagcattgctaacagaacccgctcacgctcccagaactcc
aacaacaccttcctgtacgagagtgagaggggtggattccgcaggaccttctcccggtcc
gagcgtgcgggtgtgaggacgtacgtcagcaccatcaggatccccatcaggaggatcagt
gatgcagggttgggagaggccacctccatggctctgcagaccatgatacgacagatcatg
accggctttggagagctcagctacttcatggactcagactctgactcctcggactcaaac
cgtggagctggtaacccctccggcgctgccgacctggccgaggcgctcaacactcccgag
gggggagtagccggcatggcggagggggcggagcctcctgtctcagtgagcgggcatagt
atgggaggagccggggaggcaaggacagaggagggggagggggaggacgggattggtctg
ggtctggccccagggataggtttaggggtgggtggcaccaccagggaggggcgagctcgg
ccccgtgcccccatcagtttggaggaaccagggtcactacccttcctccgccttgctcac
ttcttcctcctgaatgatgaggatgaggaacagcccagaggactcaccaaggagcagatc
gacaacctctccaccaggaactttggggaaagtgatgctctgaagacctgcagtgtgtgt
atcacagagtatgctgaggggaacaagttgaggaagttgccctgttctcatgagtaccat
gttcactgtatcgaccgctggctgtctgagaactccacctgtcctatctgccgcagggcc
gtgttggtgtctgctaaccgagagagtgtggtctaa
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