Salmo salar (Atlantic salmon): 106612603
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Entry
106612603 CDS
T04363
Name
(RefSeq) alpha-actinin-4
KO
K05699
actinin alpha 1/4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04517
IgSF CAM signaling
sasa04518
Integrin signaling
sasa04519
Cadherin signaling
sasa04520
Adherens junction
sasa04530
Tight junction
sasa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106612603
04518 Integrin signaling
106612603
04519 Cadherin signaling
106612603
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106612603
04520 Adherens junction
106612603
04530 Tight junction
106612603
09142 Cell motility
04810 Regulation of actin cytoskeleton
106612603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106612603
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106612603
04147 Exosome [BR:
sasa04147
]
106612603
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106612603
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106612603
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106612603
Exosomal proteins of colorectal cancer cells
106612603
Exosomal proteins of bladder cancer cells
106612603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
106612603
NCBI-ProteinID:
XP_014069386
UniProt:
A0A1S3SYH4
LinkDB
All DBs
Position
ssa09:complement(105796782..105840234)
Genome browser
AA seq
924 aa
AA seq
DB search
MVDYHASNNQASSGGPAVYMDPREQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGT
QIENIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDYIASKGVKLVSI
GAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFH
ISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAEKYLDIPKMMDAEDIVNT
ARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWI
RRTIPWLENRAPEKTMAEMQQKLEDFRGYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNR
PAFMPSEGRMVSDINGSWHNLEGAEKGYEEWMLNEIRRLERLDHLAEKFRQKATIHESWT
DGKEAMLTQKDYETASLSEVKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSP
SVNARCQKICEQWDALGSLTQSRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAME
DLQDMFIVHNIEEIQGLITAHEQFKSTLPEANKEREAIQAIQAEVQKIAQYNGIKLSGGN
PYTTITPKSIDDKWHKVEQLVPQRDRALQEELAKQQSNDHLRRKFATQANIVGPWIQTKM
EEIGRISIEMNGTLEDQLVNLREYEQSIIEYKPNIDQLEGDHQLIQEALIFDNKYTAYTM
EHLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGALMAEE
FKACLISLGYDVENNKAKRTGQMDMDNYRALLVATGNSLGDAEFARIMGIVDPNNSGAVT
FQAFIDFMSRETTDTDTADQVIASFKILAADKNFITAEELRRELPPDQAEYCIARMAPYS
GPDAKPGALDYMSFSTALYGESDL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgcttctaataatcaagcatcgtctggaggaccagccgtttacatg
gacccaagagaacaagaaaatgattgggaccgggacctgctgctggacccggcctgggag
aaacagcaaagaaagacattcacggcctggtgcaactcccacctgaggaaagcaggcaca
cagatcgagaacatcgaggaggacttcagggatggcctgaaactcatgctcctgctggag
gtcatctcaggcgaacggttacctaagcccgagagaggcaagatgagggtccacaagatc
aacaacgtcaacaaagcgctggactacatcgccagcaagggagtcaagctggtgtccatc
ggcgcagaggaaattgtggatggcaacgccaagatgaccctgggcatgatctggacgatc
atcctccgcttcgccatccaggacatctctgtggaagagacctctgccaaggagggcctg
ctcctgtggtgccagaggaagaccgcgccctacaaaaacgtcaacgtgcagaacttccac
atcagctggaaggacggccttgccttcaacgctctgatccacagacacaggccagagctc
attgactacgacaagctaaggaaggatgaccccttgaccaacctgaacaatgcctttgag
gtggctgagaagtacctggacattcccaagatgatggacgctgaagacattgtgaacact
gcccgtccggatgagaaagccataatgacctatgtgtccagtttctaccatgccttctct
ggagcccagaaggctgagactgcagccaataggatctgcaaggtgctggctgtcaaccag
gagaatgagcacctgatggaggactacgagaagctggccagtgacctgttggagtggatc
cgccggaccatcccgtggctggagaaccgggctccagagaagaccatggccgagatgcag
cagaagctggaggacttccggggctaccgccgcgtccacaagccccccaaggtgcaggag
aagtgtcagctagagatcaacttcaacaccctgcagaccaagctgaggctgagcaacagg
cccgccttcatgccctccgagggacgcatggtgtcggatatcaacgggtcatggcacaac
ctggagggggctgagaagggctacgaggagtggatgctcaacgagatccgtcgcttggag
agactggaccacctggcagagaagttccgtcagaaagccaccatccacgagtcctggacc
gatggtaaggaggccatgctgacccagaaggactatgagacagccagcctgtcggaggtc
aaggctctgctgaggaaacatgaggcgtttgagtctgacctggccgcccaccaggaccgc
gtggagcagatcgctgccatcgcacaggaactcaatgagctggactactacgactcccct
agtgtgaatgcccgctgtcagaagatctgtgagcagtgggacgccctggggtctctcacc
cagagccgcagggagtctctggagaggacagagaagcagctggagtccattgacgagctg
tacctggagtacgccaagagggcagcacccttcaacaactggatggagggggccatggag
gacctgcaggacatgttcatcgttcacaacatcgaagagatccagggcctaatcacagcc
catgagcagtttaagtctaccctcccagaggccaacaaggagcgggaggccatccaggcc
attcaggccgaggtgcagaagattgcccagtacaacggcatcaagctgagcgggggcaac
ccctacaccaccatcacacccaagagtatcgacgacaagtggcacaaggtggaacagctg
gtgccccagcgtgaccgggccctgcaggaggagctggccaagcagcagtctaacgaccac
ctgcgccgcaagtttgccacccaggccaacatcgtcgggccctggatacagaccaaaatg
gaggagattgggcggatatccattgagatgaatggaactctggaggaccagctggtgaac
ctgagagagtatgagcagagcatcatcgagtacaagcccaacatcgaccagctggaggga
gaccatcagctcatccaggaggccctcatcttcgacaacaaatacaccgcctacaccatg
gagcacctgcgggtgggctgggagcagctcctcaccaccatcgcccgcaccatcaacgag
atcgagaaccagatcctgacccgcgacgccaagggcatcagccaggagcagctgcatgag
taccgcacttccttcaaccactttgacaaggaccacagcggggccctgatggcagaggag
ttcaaggcgtgcctgatcagcctgggctacgacgtggagaataacaaagcgaagcgcaca
gggcagatggacatggacaattaccgcgctctgctcgttgcgactggaaacagcctgggc
gatgccgagtttgcccgcatcatgggcatagtggaccccaacaacagcggagcagtcacc
ttccaggccttcatagacttcatgtcccgggagaccacagacacagacacagctgaccag
gtcatcgcctccttcaagatcctggctgcagacaagaacttcatcactgctgaggaactg
aggcgtgagctgcctccagaccaggcagagtactgcatcgcccgcatggcgccctactcg
ggccccgacgcgaagcccggagccctcgactacatgtccttctctaccgccctctacggg
gagagtgacctctag
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