Salmo salar (Atlantic salmon): 106612708
Help
Entry
106612708 CDS
T04363
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04517
IgSF CAM signaling
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106612708
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106612708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106612708
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106612708
Intermediate filaments
Intermediate filament-binding proteins
106612708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
106612708
NCBI-ProteinID:
XP_014069609
UniProt:
A0A1S3SZ39
LinkDB
All DBs
Position
ssa09:complement(101725431..101801173)
Genome browser
AA seq
2752 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLASSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAID
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLQVDDLLQKHSLQEADITAQADRVQTLNSAALIFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LVTQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVCEAVDKHRMHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEHFEGISVEWEELKRTLQGCENSLMVAGRLQQFIQDLDSFLTWLVQ
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLETEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPTT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELAQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQELESTTQAKARQLFEAN
RADLLVQSYTSLDHRLHQLEGQLGYVDQGQDLTSVNKQLKKLQTMERQMEEWYAEVGELQ
VAAASIPQQGQVMDTVGERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAAASQEHGSSLQAVQHLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLSGLWNLLWAETERRQLVLDSMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKCQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEASTIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREILAQIDDKQRRLPEVRARQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPSIPHSDITGSGLSGPFRDVSSVEVLMNYHQSLKSEVEAR
NKSVLQCIEMGKTLLAARNPAAEEIKEKLDKVVAKQYELSEKWDKHWEVLQHMLEVHQFA
QEAVVAEAWLTAQEPFINSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVE
KMKAEQSKLPPTPLLGRKVFLDPQETSPARSQGSPLMRRIIYEQAEHRAERPSQESLPSS
VARRLGSTVANYTPIMNGSSGYRSSLEAWAIPVMGGVAGGVVGVVAGLGTTAMEARGVAT
NLGTTTAMEVRGVAAGLGTAASEARGLAVGLVTPAVEAKEIAASLVTGAAAAVEVKASQY
LRQPKIKHMDDMVTPMLVACRLEKVREKEVREKEAREREQRERERDIVLMEPAPVMPVMA
EVVLQEMGREGMGRERLNSEPSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQH
SSEVLMIQARRDELPQEVWRERAERKERKLERQTSSEQEGHGHEGRRKDRHRTERQESSE
HDTAKEQSDRRSTEKRSGGQTLFDIVEQLKEREAATARGEVPKVPNGVPEKSSGRPDRPR
ARDRPKPRRRPRPKDPSAGEATTRRSRSAPEPGMAQSVSPSVPQPPSHTAHHEGFLFRKL
DIETMRKSSNSRSWVNLYCVLNKGEIGFYKDAKNTTTPYNNEPMLNLGHCHCDVTLGYKK
KKNVFTLKTKDGSEFLFHAKDESQDDLKAWTTNINKSIAEHVEIAKWGQPQPTTSSTDEG
TRRDGSKADNKSERGEKSDRGERPERVERSERSDKGETKSDTKRSEKSSKKK
NT seq
8259 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccaacgccagctgaacaacaac
aacacccgtctggccagcagctcgggacactgggaaactgaggtcaccagctccaaactg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacttggcaagagtgtcctgtcgaatcgctgacctctac
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgcctcacccttggcctcatctggaccatcatccttcgcttccagatc
caggtgattaagattgagtgtgacgacaacagggagacgcggtcggcaaaggatgccctg
ctactctggtgccagatgaaaactgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgcctttaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtcaaatgccacacacaacctccagcaagccttcaac
attgctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacggag
aacccagatgagaagtcgataataacctatgttgtgtcctactatcattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgat
ggtcagaagatgatcgatcgatatgaggctctggcctcggagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaggtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaataaggcgtgggagaggctg
gagaaggcggagcatgagagaggcgtggccctacgtcaggagctgattcgccaggagaag
ctggagctgctggcccagcggtttgaccacaaaaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcggacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactacgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggttggagaagaacctggctctgcagaagaccttccaggacatggtctat
atgatcgactggatggaggacatgcaggtccagctcctgtccaaagacttcggcaagcat
ctgctgcaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagcg
caggcagatagggtgcagacccttaactcagccgctctcatattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtccgaggcctggatccgtgagaagagctccatc
ctggtcacccagacatgcggcaaggacctgagcagcgtgctgcggctgctgcagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccagcagaccatgaagaag
ggcaagcagatcctgatggagaagagttttggcacagggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggccgcgcagagactgggccacctg
caggaggcactcaatttcttccagttcagcacagagacggacgacctgctggcctggctg
caggacgcctaccgcctggtttccagcgaggactttggccacgatgagtactccacccag
tcactgctcaagaagcaccggggtgtgtgcgaggccgtggacaagcaccggatgcacgtg
gtaactctgcgcaaacacatggtggcgctgccactgcactaccgggagctggacgaggtg
cagtcgaggatgggcgaggcggagcagctgtacgccgaggtggccgaggtggccgttctg
aggcagcagtggctgcacgatgcgctggccgtctacctcatgttcagtgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggatgtggaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggatgttaaccagatagtgcagcaactcctggacagtggccac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaaaaaggaccacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtcccagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggctatctcgcacccggccaaggccatggaggtcctggagcacttcgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgagaactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcag
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgagcgg
ctgcaggcggtcaacgagctgctggagaccgaggaggctccgctgccatatgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggcccatgttgagctccccaccact
gtggagacggtggaggctgccatcaagaaacacaaggactttaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgcatcaaggaacgtgtagacaccctcgctaacagaggcaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctggcccagaacaaagagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggaactagagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggccgacctgctggtgcagagttacaccagcctggaccatcggctgcaccagctggag
ggacaactgggctacgtggaccagggtcaggacctgactagcgtcaacaagcagctcaag
aagctccagacgatggagcgtcagatggaggagtggtatgcggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggacacggtcggcgagcgccag
gccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccgcgtctcaggagcacggctccagtctacaggctgtg
cagcacctcatgaagaaaaaccagactctgcagagggagctgcagggccatcgggcgagg
gtggaggatgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagcgggctgtggaatctgctgtgggccgagaca
gagagaagacagctggtgctggattccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcaccctgcagctactgaagaagcacctagtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagtgtcagtctcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccatgaggtggacgaactggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcagagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactacggccacgccgaggcctccaccatcgccgagtggaaggac
ggtgtgaacgaggcctgggccgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcaccgactgccgcgagatcttggcccaaatt
gatgataagcagcggaggctgcccgaggtgcgggcacgccagggtggcactgccaacacc
agcaccctgcagaggctcatgcacagcttcgaacacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggccatcgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacgtcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagcattccccacagcgatataacgggctctggactctctggtcctttcagggatgtg
tcctcagtggaggtactgatgaactaccaccagagcttgaagagcgaggtggaggcgcgc
aataagagtgtgctgcagtgcatcgagatgggcaagacgctgctggccgctcgcaaccct
gctgctgaggagatcaaggagaagctggataaggtggtggccaagcagtacgagctgtcg
gagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtgcaccagtttgcc
caggaagcggtggtggctgaggcatggctcacggcccaggagcccttcatcaacagcaag
gagctgggtgccagtgtggacgaggtggagcagctcattcgccgccacgaggccttccgc
aaggctgccgccacctgggaggagcgcttcagctcactacgacgcctcaccacggtggag
aagatgaaagcagagcagagtaaactccctcccacccccctgctgggtcgaaaggtgttc
ctggacccccaggagacgtcccctgcccggagccagggctcccccctgatgagacggatc
atttacgagcaggccgagcacagagctgaaaggccctcccaggaatccttgccctcctct
gtggcccgccgcttgggatccaccgtggccaactacacccccatcatgaacggctccagt
ggctaccgcagcagcctggaggcctgggccatccccgtgatggggggagtggctggaggt
gtagtgggggtggttgccggcctgggaacaaccgccatggaggccagaggggtagcaaca
aatttagggaccacaaccgccatggaggtccgaggggtggcagcagggttggggactgcc
gcctcggaagccagagggttggcagtaggattggtcacccccgcggtcgaggccaaagag
atagctgcaagcttggtgactggtgcagccgcggcagtggaggtgaaagcctcacagtac
ctccggcagcctaagatcaaacacatggacgacatggtgacgcccatgctggtggcctgt
aggctggagaaggtgagagagaaggaggtgagggagaaggaggcgagagagagggagcag
agagagagggagagagatattgtgttaatggagccagcgccggtgatgccggtgatggcc
gaggtggtactccaggagatggggagggaggggatgggcagggagaggctgaatagcgag
cccagcagcagagaccaccgggcggggagcagccggtcagagccccagcagagagacagg
gacagagacagtagggacagtagggacagtcacagggaagccaggctggagcgccagcac
tctagtgaggtgctgatgatccaggcgcggcgggatgagctgccccaggaggtgtggcgg
gaacgggccgagcgcaaagagaggaagctggagaggcagacgtccagcgagcaggagggc
cacggacacgaaggccggaggaaagaccgccaccggacggagagacaagagtccagtgaa
cacgacacagccaaggagcagtcagacagacgttctacggagaaaaggtcaggcggccag
accttgtttgacatagtggagcagctaaaagagagagaggcagcaacggcccgaggggag
gttcctaaagtgccaaacggcgtgccagagaagtcttccggacgtccagaccggccgcga
gcacgggaccgccccaagccccggcggagacccaggcccaaggacccatctgcaggagag
gcgaccacccggcggtcacgctcggcgccagagccagggatggcccagagcgtgagcccc
tcagtcccccagccgcccagccacacagcccaccacgagggcttcctcttccgcaagctg
gacatcgagaccatgaggaagagctctaacagcagatcctgggtcaacctgtactgtgtg
ctgaacaaaggagagataggcttctataaggacgctaagaacaccaccacaccttacaac
aatgagcccatgctcaacctcggccactgccactgcgacgtcacccttggatacaagaag
aagaaaaacgtctttacacttaaaacgaaagacggaagtgaatttctgttccatgcaaag
gatgagtcacaggatgatctaaaggcctggaccaccaacatcaacaagagcatcgcagag
catgtggagattgccaaatggggtcagccccagcctactacctcatccacggacgagggc
acgcgccgcgacggcagcaaggccgataacaagtcagagcggggagaaaagtcagaccgg
ggggaaaggccggagagggtcgagcgctctgagaggtcggataagggtgagaccaaatcg
gacaccaagcgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
