Salmo salar (Atlantic salmon): 106612758
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Entry
106612758 CDS
T04363
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106612758
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106612758
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_3
Ank
Ank_4
PKD_channel
Ank_5
Egg_lysin
YVC1_C
BAR_4
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
106612758
NCBI-ProteinID:
XP_014069709
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Position
ssa09:complement(110408420..110438903)
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AA seq
895 aa
AA seq
DB search
MSQLYYRRTDNSSYRDRIPLRIVRAESELSGLERNYLGAVEKGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLTYNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSVPQPHEVRCNCME
CVSSSDVDSLRHSRSRLNIYKALASPSLLALSSEDPFLTAFQLSWELQELSKVENEFMSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYRDDINPLLDENTNDLARLKLAIKYTQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFLTCVFIGLLFPLFSLCYLVSPKSRYGHFIR
KPFIKFICHTTSYLTFLFLLLLASQHIVSTDPNRQGPTPTVVEWMILPWVLGFIWTEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYVKYSGFRARNEWQMWHPTLVAEAV
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETDEGLKGCKGIRCETQNNAFSTLFETLQSLFWSVFGLISLYVTNVEADHQFTEFVGAT
MFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNI
IPSPKSIWYFICWIRKHIFKITRAKKTETFGTIGRRAAINVRINHQYQEVLRNLVKRYVA
AMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKVGPGGGGGGVAIAGSKPSEGAG
ASSLVYPDHSFKYSPKFPPATLKTNMFHVTTSMLQQRSAPSSTSSSTSPSTSQGLDRLVN
GSVVPSWTSTDTSSIPTSSTSISSPSSTPSIKDGPARKDICDFGLYSVSEEMGES
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaactgtactaccgcaggacagacaactcctcctacagggaccggattcctctg
aggattgtcagggccgagtctgaactgtctggcctggaaaggaactacctgggagcagtg
gagaaaggagactatgcctcagtcaaacaggctctagaggaggcagagatctacttccgg
atcaacattaactgtatagacccgttgggccgcacagctctgctgatcgctatagagaat
gagaacctggagattatagagctgctgctcacctataacgtgtacgtcggtgacgctctc
ctacacgccatccgtaaagaggtggtgggggccgtggaactgctgctcaaccacaagaag
cccagcggggagaaacaggttcctcccatcctattggacaagcagttctctgacttcact
cctgacatcacacccatcatcctagcagctcacaccaacaactatgagatcatcaaactg
ctggtgcagaagggggtgtctgtgccccagccacatgaggtgcgctgtaactgcatggag
tgcgtgtccagctctgatgtggatagtctgcgtcactcccgctcacgtctcaacatctac
aaggccctggccagcccatcactactggccctctccagtgaagaccctttcctcacagcc
ttccagctctcctgggaactacaagaactcagcaaggtggagaatgagtttatgtcggag
tatgaggagttatctcagcagtgtaaacagtttgccaaggacctgttggaccaaaccagg
agttccagagaacttgagctgatcctgaactacagagatgacatcaaccctctactggat
gagaacaccaatgacctggccagacttaaactggctatcaaatacacacagaaagagttt
gtagcccagcccaactgtcagcagctgcttgcgtcccgttggtacgatgagttccctgga
tggaggcgtcgtcactgggcagggaagttcctaacctgtgtcttcatcggcctcctcttc
cccctcttctccctctgctacctggtctctcctaagagccgctatggacacttcatcagg
aagcccttcatcaagtttatctgccacacaacgtcatatctcaccttcctgttcctgctg
ctgctggcctcccagcacatcgtttctacagaccctaacagacaggggccgactcctact
gtggtggaatggatgatactgccctgggtactgggcttcatctggacagagattaaacag
atgtgggatggaggattccaggactatatccatgactggtggaatctcatggactttgtt
atgaactctctgtacctggctaccatttctctgaagatcgttgcctatgtcaagtacagt
ggcttcagggccaggaacgaatggcagatgtggcatcctaccttggtagcagaggctgtg
tttgccatcgctaacatcttcagctccctccgcctcatctctctgtttacggctaactcc
cacctgggacctctacagatctctctgggcaggatgctgctggacatccttaagttcctg
tttatctactgcctggttctcttggccttcgctaacgggctcaaccagctctacttctac
tatgagacagacgagggattgaagggttgcaagggcatccgctgtgaaacacagaacaac
gctttctcaacgttgtttgagacactccagtcattgttctggtctgtctttgggttgatc
agtctgtatgtgaccaacgtggaggcagaccaccagttcacagagtttgtaggggccacc
atgttcggaacctataatgtcatctctctggtggttctactcaacatgctgatcgccatg
atgaacaactcataccaacacatcgctgatcatgcagacattgagtggaagtttgcaaga
accaagttgtggatgagttactttgaagagggagggactctgccttctccattcaacatc
atccctagccccaagtcaatctggtacttcatctgctggatcaggaaacacatcttcaag
atcaccagggccaagaaaacagaaacatttggaaccatagggagacgggctgctataaac
gtaagaataaaccaccagtatcaggaggttttgaggaacctggtgaagagatatgtagca
gccatgatcagagatgccaagacagaggaaggattgactgaggagaactttaaggagctg
aagcaggacatctccagctttaggtatgaggtcctggggatgatgaaggggaaggtgggg
cctgggggtgggggtgggggcgtggctatagcaggaagtaaacccagtgaaggggcaggg
gcctccagtctggtctaccctgaccactccttcaagtactcccccaagttccccccggcc
acgcttaagaccaacatgtttcacgtcaccacatccatgctccagcagaggtcagccccc
tcctccacctcctcgtccacatccccttccacctctcagggcttggaccgactggtcaac
ggctctgtggtaccctcttggacctccactgacacctcctccatccccacctcctccact
tccatctcctctccctcctccactccctccatcaaagacggaccggccaggaaagacatc
tgtgactttgggctctactctgtgtctgaggagatgggggagtcatag
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