Salmo salar (Atlantic salmon): 106612810
Help
Entry
106612810 CDS
T04363
Name
(RefSeq) ribosomal RNA-processing protein 8-like
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106612810
Enzymes [BR:
sasa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
106612810
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106612810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
106612810
NCBI-ProteinID:
XP_014069800
UniProt:
A0A1S3SZP4
LinkDB
All DBs
Position
ssa09:113257517..113260820
Genome browser
AA seq
585 aa
AA seq
DB search
MFAEEDEWNDDPEAKALTKTVISSFKLSDSTNITTKCVGKKKSLLRTLQTLGSVPNWSKS
NGAPREAGSDSETEAILTPHTKRKKKRSKRGCKKVAASGEETDKDSGDLCAEETAVPEAK
KPIKAKKPIKAGFKKVKNTESIMGGSKQGKAATDAEIERLNRKQWKNKMKNKKKCKNKYK
IKNGENTTPPKNTKAETTVQKDTEDGQKTASGVNRETVVVQTQRHTKKNKQKEGERKTQK
RKKVPEGKETTFNETASTPGTETVQNNKNLSEKKTKGSIQEKAVPLGKGLKTEETPRVVV
NEEQQTEPSGVKRRKRDESKGQDRRREKLRRMLHGQSLEKKDQPTEQEEETRTTEEVKEA
PADRSAALRSRMEQRLESARFRYINEVLYTTSSGEAKRMFRQDPQAFSIYHRGFTAQVQR
WPANPVDAIISYIRHKPASLVVADFGCGDCKIALSLKNKVHSFDLAPICDCVTVCDMANV
PLKDGTVDIAVFCLSLMGTNLGDFLFEANRVLVMGGILKIAEVASRFENMRNFMGALSSL
GFKLVTKDTENSHFYSFEFEKIAEAPERVKKAGGLELRPCLYKKR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctgaggaggatgagtggaacgatgacccagaagccaaagctctgaccaagacg
gtcatcagcagtttcaaactgtctgacagcaccaatatcacgacaaaatgtgttgggaag
aagaagagtttgttacggaccctccaaacactggggtcagtgccaaactggagcaagagc
aatggtgcccctcgggaagcaggtagtgacagcgaaacagaggccatactgacaccacac
accaagaggaaaaagaaaagaagcaaaagaggatgcaagaaagtagctgcttcaggagaa
gagaccgataaggacagtggagatttgtgtgccgaggagactgcagtgcctgaagctaaa
aagccaataaaagcaaagaaaccaataaaagcagggttcaaaaaggtaaagaatacagag
tccattatgggtggtagtaaacaaggaaaagctgcaacagatgctgagattgagagatta
aaccgaaagcaatggaaaaacaagatgaagaacaagaagaaatgtaaaaacaaatacaaa
ataaaaaatggagagaataccacccccccaaaaaacacaaaagcagagaccactgtgcaa
aaggatacagaagatgggcaaaaaacagcttctggtgtgaacagggaaacagtggttgtc
cagacacaacgccatacaaagaaaaacaaacagaaagagggtgagcgtaaaacacagaaa
aggaaaaaggtcccagagggaaaagagacgactttcaatgagactgcttccactccaggc
acagaaacagtccaaaacaataagaatttgtcagagaaaaagacaaaggggagcattcaa
gaaaaagcagttccactaggtaaagggttaaagacagaagagacacctcgggtggtggtt
aacgaggagcagcaaacggagccgtccggcgtgaagaggaggaaacgggacgagagtaaa
gggcaggaccggcggagagaaaagctcaggagaatgctccatggccagagcctggaaaag
aaagatcaacctacagagcaggaggaggagacacgcaccacagaggaggtgaaagaggct
cctgcagaccgctcagctgctctgaggtcccgcatggagcagcgtttggagtcagcgcgg
ttccgctatattaacgaggttctgtacaccacgtctagtggggaggcaaaacgcatgttc
agacaggacccccaggcttttagcatctaccacaggggctttacggcacaggtccagcgc
tggccagctaatcctgtcgacgccatcatctcctacatacgccacaagcctgcctctctg
gtagtggcagattttggctgtggcgactgcaaaattgctcttagcttgaagaacaaagtc
cacagttttgacttggcacccatctgtgactgtgtaactgtctgcgacatggctaatgta
ccactcaaggatggtactgtggacatagctgtattctgtctctctcttatggggactaac
cttggggattttctatttgaggctaaccgtgtgctggtgatggggggtatcctgaaaatt
gcagaggtggcaagtagatttgagaatatgaggaacttcatgggtgctttgtccagcctg
ggattcaagttggtcacaaaggacacagagaatagccacttttactcctttgagtttgaa
aagattgcagaagctccagagagggtaaagaaggcaggaggactggagctgaggccttgt
ttgtacaagaaacgatga
DBGET
integrated database retrieval system
