Salmo salar (Atlantic salmon): 106613200
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Entry
106613200 CDS
T04363
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106613200
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106613200
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
DUF5040
Motif
Other DBs
NCBI-GeneID:
106613200
NCBI-ProteinID:
XP_014070703
UniProt:
A0A1S3T299
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Position
ssa09:128593777..128600112
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AA seq
883 aa
AA seq
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MENITPDQWQAIVNKKLNFPPELIAAIQEDNSILVGSLLSTGDGIICQLDESEDRLWREA
LNLSIRMGNEDTFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLTKKGHAIPLPHSVSCTCLECR
NGRQYDLLKFSLSRINTYRGMASRAYLSITTEDAMLSAFRLSRELRKLSKKEPEFKPQYL
SLEELCQEFAVEMLAMCRNQSEVTTILNICDDDNEDELDEQTFEERIPTLSRLRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPLLCMIYWVAPKSKIG
KTLKIPVIKFLLHSASYLWFIITLLAESIFMELYRNEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGYIVDWSNILDMIVLSMYLASFGLRVLIMAIGHFVCQDQNLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMLSFTRLAYILPAHESLGTLQISIGIMIDDMMRFM
FLLMIIGTAFLCGLNNIYVPYATSPHLGRFNETFNFLFWTMFGASNQGYVDMPDFVLAQF
VGRVLYGVFTLVIVIILLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGSTIPV
PFNLVPSPKALFYLLRGFFCCCNQKKTPDYPPIASVSNSTMNNSGEAGMDRVSYRLQVVK
ALVQRYIEAARREFGEATRKDVGNRITELNKGVGRLHSAMKQLHQNLQNSKSFGSKSDGG
NFLGKYIKGAKNKFKNFDKNEAMGNSPDLLRVNLHLIWGVEEGKKEGKTEMIPEVFTEKN
TPTNNRESSPDISTESHSGQEFLVRETESTCTQGTVEENTNIM
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattacgccagaccaatggcaggcgattgtgaacaaaaagcttaacttccct
ccggagctgatagcagccattcaggaagacaactcaattctggtgggcagcctgctgtcc
acaggggacggcatcatctgccagctggatgagtctgaggaccgtctgtggagagaagcc
ctgaacctgtccatccgcatgggcaatgaggacactttctctgctctgatgctgggcgtc
aagtttgacttcaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgcctggaccaggaaaagggcaacaagatggatgtg
cgctccttctccatggccatatttgaccactccattgacgactcccagtttgcccccgga
gtgaccccgctgaccctggcctgtcagaaggacctgtatgatattgtcaccatgttgact
aagaagggtcatgccatccctctgcctcactctgtctcctgtacctgtctggagtgcagg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggc
atggccagccgggcatacctctccatcaccacagaggatgccatgctcagtgccttcaga
ctcagtcgggagctacgcaagctctccaagaaagagcctgaatttaagccccagtacctg
agcctggaagagctgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacgattctgaacatctgtgatgacgataatgaagatgaactggacgag
cagaccttcgaggagaggattccaaccctatcacgcctacgccttgcagtcaattacaat
cagaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggaggggcagcaagacggtctggaaactcacggtgtctcttgggatc
ttcttcaccatgcctctcctctgtatgatctactgggtcgctcccaagtccaagattgga
aagactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcacccttctagctgagtctattttcatggagctgtaccgcaatgagttcgcatcc
cggcagcaaaacatcctctacaactccctccatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggttacatcgtggactggtccaac
attctggacatgatagtactcagcatgtacttggcctccttcggtctgagagtcctcatc
atggcaattggtcactttgtttgccaagaccaaaacttggttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
ttcgctgtgaccagcatgctcagcttcacacgactggcctacatcctgcctgcccatgag
tctctgggtactctgcagatctccattggtataatgatagacgacatgatgaggttcatg
tttctcttgatgatcattggaacagcttttctctgtggactgaataatatctacgtgccc
tacgcaacttctccacatcttggacgcttcaatgaaaccttcaactttctcttctggacc
atgtttggtgcatctaatcaaggctatgtggacatgccagattttgttctggctcagttt
gtgggcagggtcctgtatggggtcttcactctcgtcattgtcattatcctgctcaatatg
cttatcgccatgatcactaattcattccagaagatagaggatgatgctgatgttgaatgg
aagtttgctcgttcaaagctctacttgagttacttcagagagggctccactataccggta
cccttcaacctcgtcccctctccaaaggccttgttctacttactgaggggctttttctgt
tgttgcaaccaaaagaaaactccagactatcctcctattgcctctgtgtccaacagcaca
atgaacaacagtggcgaggcagggatggaccgagtgtcatatcgcctgcaggtggtcaag
gcgctggtacagcgctacatagaagcagcccgcagggagtttggagaggcgacacgtaaa
gatgtggggaacaggatcacagagctgaacaagggggtggggagacttcactctgctatg
aagcagctccatcagaacctgcagaacagcaagtccttcggctcaaagagcgatggaggc
aacttcctgggcaagtacatcaaaggagcaaagaacaaatttaagaactttgataaaaac
gaggcaatggggaatagcccagacctgttacgagtcaatctgcacctcatatggggggtg
gaggaggggaagaaagaggggaaaacagaaatgatcccagaggtgtttacagagaaaaac
acccccacaaacaaccgcgagagctccccagacatcagcactgagtcccatagtgggcag
gagttcctggtgagagaaacagagagtacctgcacacagggaacagtggaggaaaacact
aacatcatgtag
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