Salmo salar (Atlantic salmon): 106613399
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Entry
106613399 CDS
T04363
Symbol
nectin1, pvrl1
Name
(RefSeq) nectin cell adhesion molecule 1
KO
K06081
poliovirus receptor-related protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03266
Virion - Herpesvirus
sasa04514
Cell adhesion molecules
sasa04520
Adherens junction
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
106613399 (nectin1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106613399 (nectin1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106613399 (nectin1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106613399 (nectin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106613399 (nectin1)
04090 CD molecules [BR:
sasa04090
]
106613399 (nectin1)
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
Nectin family
106613399 (nectin1)
CD molecules [BR:
sasa04090
]
Proteins
106613399 (nectin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
Ig_2
ig
I-set
TM_ErbB1
Beta-APP
DUF4786
Motif
Other DBs
NCBI-GeneID:
106613399
NCBI-ProteinID:
XP_014071061
UniProt:
A0A1S3T3A0
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All DBs
Position
ssa09:139765186..139851185
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AA seq
360 aa
AA seq
DB search
MSARPLTRMTLTTPTIVARPQKRKMTVATCLSANGKPQSVIKWDTRLKGEATFQETQNSN
GTVTVRSNYVVVPSRETHKQKLTCIVTYRNERITDSVVLNVQYEPEVKIEGFDGNWYLNR
QDVSLTCNTDANPPVTVYQWKLLNGSLPSTVEIRNNSLIFKGAVTYELAGTYVCDATNGI
GTRTGLVEVNVTEFPNNPPPGGREIPQEQHNAGAVIGCAVGGVVLLAAAATLLFVFLRRR
QRTFKGDYSTKKQVFGNGYSKAGGLPAHPPIPNNLQYPDDSDDEKKPAQIAVTGGFEASE
RDFDGDAEDLKRPYFTVDEGESQDYDERTLAFQYNPGPEIADDMVSQTDGSVISKKEWYV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccgacctctgacccgaatgaccttgaccacgcccaccatcgtggcccgcccc
cagaaacgtaagatgaccgtggcgacgtgcctctcggccaatgggaagcctcagagcgtg
atcaagtgggacacgcggctgaagggcgaggccacattccaggagacgcagaacagcaac
ggcacggtgaccgtccgcagtaactatgtggtcgtgccgagcagagagacacacaaacag
aaactcacctgcatcgtaacctaccgcaacgagaggattacggacagtgtcgtgctcaac
gtgcagtatgaaccggaggtgaagatcgagggttttgatggtaactggtacctgaaccgt
caggacgtcagcctcacctgcaacactgacgctaacccccctgtcaccgtctaccagtgg
aaactgttgaatggatctcttcccagcaccgtggagattcgtaacaactctctgatcttc
aagggggcagtgacctacgagttagctggaacatacgtgtgcgatgccaccaatgggatc
gggactcgtacaggtctggtcgaggttaacgtcactgaattccctaacaacccgccacct
gggggccgtgagatcccgcaggagcagcacaatgcgggtgccgtcatcgggtgcgctgtg
ggcggggtcgtcctgttagcggcggccgccaccctgctctttgtcttcctgcgccgccgc
cagcgcaccttcaagggcgactacagcaccaagaaacaggtgtttgggaacggctacagc
aaggccgggggcctgccagcccaccctcccatccccaacaacctgcagtacccagacgac
tcggatgacgagaagaagcctgcacagatcgctgtgaccggagggttcgaggcgagcgag
cgtgattttgacggagacgcggaggacttgaagaggccctatttcacagtggacgaagga
gagagtcaagattacgacgaacggactctcgctttccagtacaaccccgggccggagata
gccgacgatatggtgtcccaaaccgatggctctgtcatttcaaagaaagagtggtatgtg
tag
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