Salmo salar (Atlantic salmon): 106613424
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Entry
106613424 CDS
T04363
Symbol
chd1l
Name
(RefSeq) chromodomain helicase DNA binding protein 1 like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106613424 (chd1l)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106613424 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
Torsin
SLFN-g3_helicase
ERCC3_RAD25_C
Selenoprotein_S
Motif
Other DBs
NCBI-GeneID:
106613424
NCBI-ProteinID:
XP_014071088
UniProt:
A0A1S3T3B7
LinkDB
All DBs
Position
ssa10:complement(902152..967192)
Genome browser
AA seq
1085 aa
AA seq
DB search
MASFPQKIKTSIPEETKNSLTEKDLQKWGLQGIQLRAYQLDGVQWLTQCLANQQGCILGD
EMGLGKTCQTISLLLYMRGALRQDGPFLVLSPLSVMDNWRSEMKCLSPCLKVLCYSGDKD
KRAELQRDMNNTHYHVLLTTYELCIKDASFLKRRKWKILVVDEAHRLKNQNSLLHKILME
FSLDFRVLLTGTPIQNNLTELYSLLSFVQPSLFPIDQTEDFTNTYNQVQTQPTLASDLQR
VLQPFLLRRVKAEVAADLPVKTEILMYHGLSALQKRYYKAILMKDLYAFGNEQGNKTRLL
NILMQLRKCVDHPYLFNGVEPEPFEMGEHLIQASGKLCLLDSMLAYLHQGGHHILLFSQM
TRMLDILQDYMEYRGYSYERLDGSVRGEERNLAIKNFSSKDVFVFLLSTKAGGVGMNLTA
ADTVIFIDSDFNPQNDLQAAARCHRIGQTRAVKVIRLLGRDTVEEIVYSRAVSKLRLTNT
VIEEGRFSLLNHTHSAAAAGLQLSEILKFGVDKLLSSEESSIQAVNLGLILGQSRDGEWL
TDEAPTQTKDLPTEEEEEEESEGQNHMYYFEGRDYSREMSSEDQRTFSRLQEEEAGGGGG
GERRATRHNDEVCLSGPLLAPMRKRKALTETDLKEREEAAAKRARLQEDKRRRLQENKHR
KKMAWWESNGYRSLCLPSVESEEEEEEEEEADDLSVTSTDSEHSAISYVLGDVTHPYGNQ
DDAIIVHCVDDSGRWGRGGLFTALENRSDEPRRQYELAGKMKDLKLGSVLLFPVDDKQSR
LDGQDQVALMCLSVCPQVALIVAQHRARDNSLSGIHLSALEEGLQKIYRVAKTNKAGVHL
PRIGHSTRGFNWYGTERLIRKHLASRGVHTSIYYYSRSVSTSALGMSTTPSIASASAPTS
KASAPTSKASAPTSKASASTSKASASTSKASVSLSPSPPHSPPVPQYPGPDSDRESEEGE
TANQSSDRGSEEGETANQSSRTPSPADPALPDFMRGVHVFFYNLTASDRKRLARYLITYE
GDEEEIMSSEVTHIVTELESPVQSQELQELIVQHPHALPVQKTWLEACFSRQRQVNTTKF
LHCFK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttcccacagaaaataaaaacgagcataccggaagaaaccaagaacagtctg
actgaaaaagatttgcagaagtggggtttgcaagggattcagttgcgagcctatcagctg
gacggagtgcagtggctcactcagtgcctggccaaccagcagggatgtatcctaggagat
gagatgggcctgggcaagacctgccagaccatctctctgctattgtacatgagaggggcc
ctgcggcaggacggcccgttcctggtcctcagcccactgtctgtcatggacaactggagg
agcgagatgaaatgcttatccccctgtctcaaggtgctgtgttactctggagacaaagac
aagagagcagagctgcaaagggacatgaacaacacgcactaccatgttttgctaactaca
tatgagctctgtatcaaagatgcctcattcctgaaaaggaggaagtggaaaatcttggta
gttgatgaggctcacagattgaagaaccaaaactccctgttgcacaaaatcctgatggag
ttctctctggatttcagagtgctgctgacaggaactcctatccagaacaacctgacggag
ctttacagcctcctgtcgttcgtccagcccagtctcttccccatagaccagaccgaggac
ttcactaacacttacaaccaggtccagacacaaccgactctagccagtgatctccagaga
gtgctgcagcccttcctgctgaggagggtaaaggctgaggtagcagctgacctccccgtg
aagacagagatcctgatgtaccacggcctgtctgccctgcagaagagatattataaagct
atactcatgaaagacctgtatgccttcgggaatgagcagggcaacaagaccagactgctt
aatatactgatgcagctccggaagtgtgtggaccacccctacctgtttaatggtgtggaa
ccagagccgtttgagatgggagagcatctgatccaggctagtgggaaactctgtctgctg
gacagcatgctggcatacctgcaccaagggggacatcatatcttgctgttttcccagatg
accaggatgctggacattctccaggactacatggaatacagaggttacagctatgagcgt
ctggatggatcagtcaggggggaagagcgtaacctggccattaagaacttcagcagcaaa
gacgtctttgtgtttctactcagcactaaagcaggaggcgttgggatgaacctaacagca
gctgatactgtgatcttcattgactctgacttcaacccccagaatgacctgcaggctgcc
gctcgctgccaccggattggtcagaccagggctgtgaaggtgatccggctcctggggagg
gatacggtagaggagattgtgtactcccgggcggtttctaagctccgccttaccaacaca
gtgatagaagaggggcgtttttctctgctaaaccacacccactctgctgctgctgccggt
ctgcagctcagtgagatcctgaagtttggagtggacaagctgctgtcgtcagaagaaagc
tccattcaggctgtgaacctgggtctgatcctgggtcagtctagagacggggagtggctg
actgatgaagcccccacccagaccaaggacctgcccacagaagaggaagaggaggaggaa
tctgagggacagaaccacatgtactactttgaagggagggactattcccgggagatgagc
tctgaggaccagaggaccttcagtcgtctccaggaggaggaggcaggaggaggaggagga
ggagagagacgggcgacacgacacaacgatgaagtgtgtctgtctgggcccctgttggcc
cccatgaggaagaggaaggccttgactgagactgacctgaaagagagggaggaggctgca
gctaagagggccagattacaggaggacaagaggaggagactacaggagaacaaacacagg
aagaaaatggcatggtgggagtccaatgggtacaggtccctgtgtttaccctctgtggag
agcgaggaggaggaagaggaagaggaggaagctgatgacctcagcgtgacctctacagat
tcagaacactctgctattagttacgtgttgggtgatgtcacacacccttacggcaaccag
gacgacgccatcatagtgcactgtgttgatgactccggccgttggggtagaggtggtctc
ttcacagcgttggagaacaggtcagatgaaccgcgtagacaatacgagctggctggaaag
atgaaagacttgaagctgggatctgtgttgctgttccctgttgatgataaacagtccaga
ctggatggccaagaccaggtggccctgatgtgtctgtctgtctgtccccaggtggccctg
atagtggctcagcacagagccagagacaacagcctgtcagggatccatctctctgctctg
gaagaaggactccagaaaatctacagggtcgccaagactaacaaggccggcgtccacctc
ccccgtatcggccactccaccagagggtttaactggtatggaacagagagactcatcagg
aaacacctggcctccaggggggtacacacctctatatactactacagcaggtctgtctct
acctctgctttaggtatgtccacaacaccctccatagcatcagcctcagccccaacctcc
aaggcctcagccccaacctccaaggcctcagccccaacctccaaggcctcagcctcaacc
tccaaggcctcagcctcaacctccaaggcctccgtctcgttatccccctctcctccacac
tcccccccagtgccacagtatcctggccctgactcagacagggagagtgaggaaggagag
acggccaatcagagctcagacagagggagtgaggaaggagagacagccaatcagagcagc
aggacccccagccccgctgatcctgctctgcctgacttcatgagaggagttcatgtgttc
ttctacaacctgacagcctcagacaggaagagactggcccgctacctcatcacatatgaa
ggagatgaggaggagatcatgagttcagaggtcacacacattgtaacagagttggagagt
cctgtccaatcacaggagctccaggagctgattgttcagcaccctcatgcacttcctgtt
cagaagacctggctggaggcctgcttctctagacagagacaagtcaacaccaccaagttc
ctgcactgctttaaatga
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integrated database retrieval system
